prot_H-elongata_contig61470.13703.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61470.13703.1
Unique Nameprot_H-elongata_contig61470.13703.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length328
Homology
BLAST of mRNA_H-elongata_contig61470.13703.1 vs. uniprot
Match: A0A6H5KSV6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.510e-48
Identity = 131/339 (38.64%), Postives = 179/339 (52.80%), Query Frame = 0
Query:    3 HIDKVIGSVSSEVCQMTATCTDDSILIGLDGMRLKAIASISTNAERVAKKAFLRDIPVMSVLSDSDVNIIEKLFTICTLSENQVLCREGTRADHLYVVKRGFFRLLKAFLPNDTPFAGDGDKDTVSSESLQYAGGRR---------LMHFDLGEIGAKEMLGESGLFYQAGAFSGATGTRGGATDPSESTGGCETAPCPPHSSARAITSNSTETSRETQANHNATPIFKTAL-ATKVRGPLLTTSLASPICATSGVGASRKGFHIASVVASTGDSQVYTASISDMKRLLKDSPSFRRFC---EIARRVHEARVSGWDAQALAEQLRNQREWEKYKREVV 328
            H +KVIGS+   V  +TA C   + ++ L   R  A+ + S  AERVAKKAFL+   V S L+D D+N +E LFT  TL +NQV+C EG+R DH+YVVKRGF R+LKAFLP +      G     S+ +   A  RR         L +FDLGEIG K+MLGE+G+          +      T P+ +     T P    S   A   +    +R    +H A+ +   A  A+       T    SP  AT G+   RK  +I S  AS G ++VY A++ D+K+L  DS     FC   + A+R+H+AR   W A ALA+QLR + EWE  K EV+
Sbjct:  134 HQNKVIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPSHASTVAAGAASARRSSLADVETRLKYFDLGEIGPKDMLGENGMLKHLDTSLVLS------TTPAPAATESVTLPAIASSQEDAQHLSQPTDARADTIDHGASTLDGDAGDASPPSADAATDGAGSPRVATMGL---RKPAYIISAAASGGTAEVYVANVYDLKKLQTDS-----FCYCWKTAQRLHQARAQAWGAGALAQQLRRRNEWEARKGEVL 458          
BLAST of mRNA_H-elongata_contig61470.13703.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 5.970e-48
Identity = 131/341 (38.42%), Postives = 180/341 (52.79%), Query Frame = 0
Query:    3 HIDKVIGSVSSEVCQMTATCTDDSILIGLDGMRLKAIASISTNAERVAKKAFLRDIPVMSVLSDSDVNIIEKLFTICTLSENQVLCREGTRADHLYVVKRGFFRLLKAFLPNDTPFAGDGDKDTVSSESLQYAGGR---------RLMHFDLGEIGAKEMLGESGLFYQ---AGAFSGATGTRGGATDPSESTGGCETAPCPPHSSARAIT---SNSTETSRETQANHNATPIFKTALATKVRGPLLTTSLASPICATSGVGASRKGFHIASVVASTGDSQVYTASISDMKRLLKDSPSFRRFCEIARRVHEARVSGWDAQALAEQLRNQREWEKYKREVV 328
            ++ +VIGS+   V  +TA C   + ++ L      A+ + S  AERVAKKAFL+   V S L+D D+N +E LFT  TL +NQV+C+EG+R DH+YVVKRGF R+LKAFLP +                                RL HFDLGEIG K+MLGE+G+      + AFS         T P  +T   ET   P  +S++      S  TET  +T  +  +TP + T  A+       T    S   AT G    RK  +I S  AS G ++VY A++ D+K+L  DS  FR   + A+R+H+AR   W  +ALA+QLR Q EW+  KR V+
Sbjct:  170 NVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXSADVETRLKHFDLGEIGPKDMLGENGMLKHLDTSSAFS--------TTPPPAAT---ETVALPAIASSQEDAQHLSQPTETPGDTTDHGASTPDWDTGDASPPSADAATDRAGSSRVATIGP---RKPAYIISAAASGGTAEVYVANVYDLKKLQTDS--FRYCWKTAQRLHQARAQAWGVEALAQQLRRQNEWDARKRGVL 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61470.13703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSV6_9PHAE1.510e-4838.64Cyclic nucleotide-binding domain-containing protei... [more]
D7FJW3_ECTSI5.970e-4838.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 50..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61470contigH-elongata_contig61470:1701..3317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61470.13703.1mRNA_H-elongata_contig61470.13703.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61470 1701..3317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61470.13703.1 ID=prot_H-elongata_contig61470.13703.1|Name=mRNA_H-elongata_contig61470.13703.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=328bp
MVHIDKVIGSVSSEVCQMTATCTDDSILIGLDGMRLKAIASISTNAERVA
KKAFLRDIPVMSVLSDSDVNIIEKLFTICTLSENQVLCREGTRADHLYVV
KRGFFRLLKAFLPNDTPFAGDGDKDTVSSESLQYAGGRRLMHFDLGEIGA
KEMLGESGLFYQAGAFSGATGTRGGATDPSESTGGCETAPCPPHSSARAI
TSNSTETSRETQANHNATPIFKTALATKVRGPLLTTSLASPICATSGVGA
SRKGFHIASVVASTGDSQVYTASISDMKRLLKDSPSFRRFCEIARRVHEA
RVSGWDAQALAEQLRNQREWEKYKREVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like