mRNA_H-elongata_contig11752.1370.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11752.1370.1
Unique NamemRNA_H-elongata_contig11752.1370.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 2.400e-156
Identity = 263/381 (69.03%), Postives = 292/381 (76.64%), Query Frame = 1
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDG------SSSYQEA----------SERSSVLSA-----EEDN--GRREG----PPSHPSKSK-----------SKRQEPRRKSR-----ILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            +DVQLA+DGTRKLVSVLTSGEG GKKVETVIIPMLRGPQ++PRYTVCVSSQVGCAMNCQFC+TGRLGLMANLQAAQ+VEQVL AKRYLE+VGDP PVTGVVFMGMGEPFDNYDR VMRAVKILTDPRAGVRL+ SSVTVSTVGLVP+IERFC DP N ASLA+SLH+V   VRDK+IP+NRRYPLEQLSETLR HFP RSS     E  G      SS+   A          +ER S+        +E N   RR+G    PPS P++ +           SKR+ P+RK R     ILAVEYTLLGGVNDS  DA R+A+WLEG+ CVVNLITFN H GTPF P+S E ++AFRRAL  RG LCT RDSRGDDGMAACG
Sbjct:  189 EDVQLAADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFCFTGRLGLMANLQAAQIVEQVLVAKRYLETVGDPSPVTGVVFMGMGEPFDNYDR-VMRAVKILTDPRAGVRLKASSVTVSTVGLVPQIERFCKDPANGASLAISLHSVVDEVRDKLIPVNRRYPLEQLSETLRTHFP-RSSKPAADEPTGVALDHASSAAAPALGPKDVATGSAERKSMAGPGRKLEQETNLLARRDGAERRPPSIPTEPQQRPRSLADGGGSKREGPQRKGRRRRPRILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARGQLCTFRDSRGDDGMAACG 567          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A836CLG8_9STRA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG8_9STRA)

HSP 1 Score: 301 bits (771), Expect = 5.070e-98
Identity = 162/334 (48.50%), Postives = 208/334 (62.28%), Query Frame = 1
Query:   16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRA-GVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            A DGT KLV   + G  +G  VETV+IPML+GPQ++ RYTVCVSSQVGCAMNCQFC+TGR+GL+ANLQAAQ+VEQV+ AKR+L  +GD  P+TGVVFMGMGEPFDNY+  V +AV+++T+    G+RL    VTVSTVG+VP I +FC DP+ RA+LAVSLH      RD ++P+N+R+ LE L +                                             PP  P+  +          R+L ++YTLL GVN+S +D  R+      + CVVNLITFN H GTPFR A   T+ AF  A+   G LCT+R+S+GDDG +ACG
Sbjct:    3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYEN-VSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQP--------------------------------------------PPGTPANGQR---------RLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACG 282          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A061QU93_9CHLO (23S rRNA (Adenine2503-C2)-methyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QU93_9CHLO)

HSP 1 Score: 276 bits (707), Expect = 5.740e-86
Identity = 156/337 (46.29%), Postives = 202/337 (59.94%), Query Frame = 1
Query:    4 DVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            DV  ASDGTRKLV  ++ G   G KVE V+IP+LR   ++ R T+CVSSQ+GCAMNCQFC TGR+GL  NL  AQ+VEQ++ A+RYL SVGD  P+T VVFMGMGEP  N D  V+ A  I   P  G+ +  + ++VSTVGLVPE+ERFC +  + A LAVSLH  +  VRD ++P+NRRYP+ +L  +LR  FP +         DG+ S +                                       R + +EY +L G+ND+ DDA R+ + LEGI   +NL+ FNPH GT F  ++ E    FR  L+  G +CTVRDSRGDD MAACG
Sbjct:  170 DVHEASDGTRKLVFRVSEGPAAGGKVEAVLIPILRSSGRKERITLCVSSQLGCAMNCQFCLTGRMGLGGNLLTAQIVEQLVEARRYLASVGDKTPITNVVFMGMGEPLHNLDA-VLAATSIFCHPM-GLHMSHNKISVSTVGLVPEMERFCRE--SSAQLAVSLHATTDEVRDWIVPVNRRYPIHELMASLRSLFPSQ---------DGAGSTR---------------------------------------RHVLIEYLMLRGINDTEDDARRLLELLEGIEAKINLLIFNPHVGTMFAASTDEQIARFRSILIQGGRVCTVRDSRGDDQMAACG 454          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A8J4CAH3_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CAH3_9CHLO)

HSP 1 Score: 266 bits (679), Expect = 1.570e-81
Identity = 154/344 (44.77%), Postives = 193/344 (56.10%), Query Frame = 1
Query:    1 QDVQLASDGTRKLVSVLTSGE------GVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            Q +  A DGTRKLV  L  GE      G    VETV+IPM     +  RYT C+S+QVGCAMNCQFCYTGR+GL+ANL  AQ+VEQV+ A+RYL     P+ +  +VFMGMGEP  NYD  VM A++IL     G+ L  + + VSTVGLVPE+ +F A     A LAVSLH  +  VRD ++P NRRYPL+QL   LR  FP                                                   + R+    + +EY LL GVND+ +DA+R+      I C+VNLI FNPH+GTPFR ++ E+ +AFR   L  G  CTVR S+GDD MAACG
Sbjct:  180 QSIHTARDGTRKLVFALLEGEHGSPAGGTHGTVETVLIPMTNRSGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLANLATAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDA-VMAAIEILA---TGLELSRNKIIVSTVGLVPEMRKFIAA--GTAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAFP--------------------------------------------------YDKRKGDNFVVIEYVLLAGVNDTLEDAQRLLAITTDIYCLVNLIVFNPHEGTPFRRSTEESVRAFRGVFLAAGRPCTVRTSKGDDEMAACG 467          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A250XDL1_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDL1_9CHLO)

HSP 1 Score: 262 bits (670), Expect = 1.650e-81
Identity = 150/338 (44.38%), Postives = 198/338 (58.58%), Query Frame = 1
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            ++V  A DGTRK+   LT G   G  +ETV+IP++R   ++ R T+C+S+QVGCAMNCQFCYTGR+GL+ NL  AQ+VEQ++ AKRYL   GD  P+T VVFMGMGEP  N + +V+ A++I+  P  G+ +    +TVSTVGLVPEI  F +   ++  LAVSLH  +  VRD ++P+NRR+ LE L   L   FP           DG                 ED                       +SRI+ +EY +L GVND+ +DA R+ + L  +R  +NLI FNPH GT F P+  E    FR  L+  G +CTVRDSRGDD MAACG
Sbjct:   96 KEVVTAKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFCYTGRMGLLGNLSTAQVVEQIVHAKRYLAEQGDRTPLTNVVFMGMGEPLHNME-VVLNAIEIMKCP-LGLHMSPGKLTVSTVGLVPEIREFVSR-SSKVQLAVSLHATTDEVRDWIVPVNRRHNLESLVSCLGELFP----------IDG-----------------ED-----------------------RSRIVLIEYIMLRGVNDTEEDAHRLLNLLSKVRAKINLILFNPHAGTKFLPSETEVVSRFRSILIQGGRVCTVRDSRGDDEMAACG 380          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A4D9CUA2_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 7.150e-81
Identity = 156/349 (44.70%), Postives = 203/349 (58.17%), Query Frame = 1
Query:   10 QLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLE-------------SVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQ-LSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            ++A DGT+KLV  +T G G G+ VE V+IPM+RGP+++PR+T+CVSSQ GCAM C FC+TG++GL+ +L A Q+V Q + A+R                  G+  P+  VVFMGMGEPFDNY   V +A+ ILT+ R  + L  + +TVSTVGLVP I+RF  +   R  LAVSLH  +  VR   +PINRRYPL   L  +LRRHFP                         +  A    GRRE                RR+   +A+EY LL GVND   DAER+A   EG+ CV+NLI FN H+G  F PAS +  ++FRR L G G L TVR+S+G + M ACG
Sbjct:   80 KIAGDGTQKLVMQVTDGPGKGQAVEAVLIPMVRGPEQRPRFTLCVSSQSGCAMACAFCHTGKMGLLTSLTAGQIVGQWVLARRLXXXXXXXXXXXXXEGETGNERPILRVVFMGMGEPFDNYAE-VTKALSILTEQRGKLLLGPNKITVSTVGLVPFIDRFVEE--TRCMLAVSLHATTDEVRSSFMPINRRYPLSSSLLPSLRRHFP-------------------------LPRAATSTGRRE----------------RRRRGPVALEYLLLAGVNDDEKDAERLAAMTEGMDCVINLIHFNSHEGADFLPASPDAIRSFRRILKGHGRLSTVRESKGAEEMGACG 384          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A2K3E0Y6_CHLRE (Radical SAM core domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E0Y6_CHLRE)

HSP 1 Score: 266 bits (679), Expect = 8.130e-81
Identity = 159/360 (44.17%), Postives = 208/360 (57.78%), Query Frame = 1
Query:   16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSAL-------------------------RKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKR--QEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            ASDGTRKLV  L  GE  G  +ETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   GD  P+T +VFMGMGEP  N +  V+ A  I++    G+ +  + +T+STVGLVPE+    A    R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP    A                                 ++      E    L   E  G  + P S  S S      +   ++ R L VEYT+L G+ND+ DDA R+AD L  + C VNLI FNPHKGT F+P++ E   AFR AL+  G++CT+RDSRGDD MAACG
Sbjct:  186 ASDGTRKLVFTLLGGEAAGGSIETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFLAQEGDRTPLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRAVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLXXXXXXXXXXXXXXXXXXXXXXXXXLGAAADVSSGPESERWLPPVEQLGS-DAPSSSSSGSXXXXXGKGSSKEGRSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIRSGMVCTIRDSRGDDEMAACG 540          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835TBN4_CHLIN (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBN4_CHLIN)

HSP 1 Score: 266 bits (679), Expect = 8.130e-81
Identity = 158/361 (43.77%), Postives = 206/361 (57.06%), Query Frame = 1
Query:   16 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQ----------------------------EASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            ASDGTRKLV  L  GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   GD  P+T +VFMGMGEP  N +  V+ A  I++    G+ +  + +T+STVGLVPE+    A    R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP                                              E+ E    L   E  G      S  S S    +   ++ R L VEYT+L G+ND+ +DA R+AD L  + C VNLI FNPHKGT F+P++ E   AFR AL+ +G++CT+RDSRGDD MAACG
Sbjct:  184 ASDGTRKLVFTLVGGEAAGGNVETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGDRTPLTNMVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRTVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPESQESERWLPPVEQLGGDAPSSSRGSSSNEAGKGSSKEGRSLLVEYTMLHGINDTLEDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIQQGMVCTIRDSRGDDEMAACG 540          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8UF95_VOLCA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF95_VOLCA)

HSP 1 Score: 257 bits (656), Expect = 1.010e-80
Identity = 149/336 (44.35%), Postives = 195/336 (58.04%), Query Frame = 1
Query:    7 VQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            V  A+DGTRKLV  LT GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   G+   +T +VFMGMGEP  N +  V+ A  I++    G+ +  + VT+STVGLVPE+    A   +R  +A+SLH  +  VRD ++P+NRRY L  L+  L              E  G+SS                                        SR L +EYT+L G+ND+  DA R+   L  + C VNLI FNPH GT F+P++ E   AFR AL+  G++CT+RDSRGDD MAACG
Sbjct:    8 VARAADGTRKLVFTLTEGEAAGGSVETVLIPIVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGERTQLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKVTISTVGLVPEMRSVVAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAAL--------------EELGNSS----------------------------------------SRSLLIEYTMLHGINDTLQDAHRLVAMLARVNCKVNLIMFNPHAGTRFQPSTEEAVTAFRSALVQAGMVCTIRDSRGDDEMAACG 285          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835XTN2_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XTN2_9CHLO)

HSP 1 Score: 263 bits (673), Expect = 6.620e-80
Identity = 163/374 (43.58%), Postives = 212/374 (56.68%), Query Frame = 1
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFP---GRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSH-----------PSKSKSKRQ----------------------EPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 1014
            + V  A+DGTRKLV  LT GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFC+TGR+GL+ +L AAQ+VEQV++A+R+L + GD  P+T +VFMGMGEP  N +  V+ A +I+     G+ L  + +T+STVGLVPE+ +  A   +R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP   G  +    T      +   AS                G P             PS S S                         EP    R L VEYT+L GVND+ +DA R+A  L  + C VNLI FNPH GT FRP++ E   AFR  L+  GL+CT+RDSRGDD MAACG
Sbjct:  186 KQVVSAADGTRKLVFTLTEGEAKGGSVETVLIPVVRQAGLRDRLTICVSSQVGCAMNCQFCFTGRMGLLGSLSAAQIVEQVVAARRFLAAEGDRTPLTNLVFMGMGEPLHNTEA-VLTAAEIMNH-HLGLHLSYNKITISTVGLVPEMRQVAAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAALEEIFPRKEGPRTPPAPTHAPADCAEPSASXXXXXXXXXXXXXSAAGEPQRWLPPLERLAPAPSTSPSSXXXXXXXXSSTPSTAAGPGPVGGWEPGSGGRSLLVEYTMLYGVNDTQEDARRLASMLSRVNCKVNLICFNPHAGTRFRPSTDEAICAFRSVLIQSGLVCTIRDSRGDDEMAACG 555          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN5_ECTSI2.400e-15669.03Radical SAM core domain-containing protein n=2 Tax... [more]
A0A836CLG8_9STRA5.070e-9848.50Radical SAM core domain-containing protein (Fragme... [more]
A0A061QU93_9CHLO5.740e-8646.2923S rRNA (Adenine2503-C2)-methyltransferase n=1 Ta... [more]
A0A8J4CAH3_9CHLO1.570e-8144.77Radical SAM core domain-containing protein n=1 Tax... [more]
A0A250XDL1_9CHLO1.650e-8144.38Radical SAM core domain-containing protein n=1 Tax... [more]
A0A4D9CUA2_9STRA7.150e-8144.70Radical SAM core domain-containing protein n=1 Tax... [more]
A0A2K3E0Y6_CHLRE8.130e-8144.17Radical SAM core domain-containing protein n=2 Tax... [more]
A0A835TBN4_CHLIN8.130e-8143.77Radical SAM core domain-containing protein n=1 Tax... [more]
D8UF95_VOLCA1.010e-8044.35Radical SAM core domain-containing protein (Fragme... [more]
A0A835XTN2_9CHLO6.620e-8043.58Radical SAM core domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11752contigH-elongata_contig11752:459..4714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score463.4
Seed ortholog evalue9.2e-128
Seed eggNOG ortholog2880.D8LLN5
KEGG koko:K06941
EggNOG free text desc.Radical SAM superfamily
EggNOG OGs2QV91@2759,COG0820@1
EC2.1.1.192
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-04_005080.1
Exons5
Model size1017
Cds size1017
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11752.1370.1prot_H-elongata_contig11752.1370.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11752 459..4714 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929685.4814825-CDS-H-elongata_contig11752:458..5651622929685.4814825-CDS-H-elongata_contig11752:458..565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 459..565 +
1691679118.679903-CDS-H-elongata_contig11752:458..5651691679118.679903-CDS-H-elongata_contig11752:458..565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 459..565 +
1622929685.4961705-CDS-H-elongata_contig11752:1148..12691622929685.4961705-CDS-H-elongata_contig11752:1148..1269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 1149..1269 +
1691679118.6918943-CDS-H-elongata_contig11752:1148..12691691679118.6918943-CDS-H-elongata_contig11752:1148..1269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 1149..1269 +
1622929685.5170033-CDS-H-elongata_contig11752:2450..25661622929685.5170033-CDS-H-elongata_contig11752:2450..2566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 2451..2566 +
1691679118.7025778-CDS-H-elongata_contig11752:2450..25661691679118.7025778-CDS-H-elongata_contig11752:2450..2566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 2451..2566 +
1622929685.5417762-CDS-H-elongata_contig11752:3168..33491622929685.5417762-CDS-H-elongata_contig11752:3168..3349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 3169..3349 +
1691679118.7142508-CDS-H-elongata_contig11752:3168..33491691679118.7142508-CDS-H-elongata_contig11752:3168..3349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 3169..3349 +
1622929685.5666769-CDS-H-elongata_contig11752:4222..47141622929685.5666769-CDS-H-elongata_contig11752:4222..4714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 4223..4714 +
1691679118.724004-CDS-H-elongata_contig11752:4222..47141691679118.724004-CDS-H-elongata_contig11752:4222..4714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11752 4223..4714 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11752.1370.1

>prot_H-elongata_contig11752.1370.1 ID=prot_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=339bp
QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSS
QVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGV
VFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIER
FCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRS
SALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEP
RRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTP
FRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG*
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mRNA from alignment at H-elongata_contig11752:459..4714+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11752.1370.1 ID=mRNA_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4256bp|location=Sequence derived from alignment at H-elongata_contig11752:459..4714+ (Himanthalia elongata Himel1 dioecious)
CAGGATGTGCAGCTCGCCTCCGACGGAACCCGGAAGCTGGTATCGGTGCT CACGTCGGGGGAAGGGGTCGGGAAGAAAGTTGAGACGGTCATCATTCCCA TGCTAAGGTGGGACCACCCACCACCACGTCGATCCTCGATGGTGTATGGT GTATATGTATGTTTCCGTTTATTTTTATCTTTCAGTTCAAAAGACGATGG CTTTCCTAGAACTAGCGCGTCTTCCAGCAACGAGTGGGCAAGCCCCCTCT CCCTCCCCATCCGATCTGTCCTGCCGCATTACTGTTAAATCAGTACATTG TTGATAATCATGCTTCCTTCGGGAAGTTTAAACCCCGGAAGCCCACGAGA GAGGGGGACCCCAAAGCGTCGCTCCCCAAGTAAGCACGTCCAATTGTGTG TGACCTCTCTAGAGAGGAAGTATACCGAAGTATACCGCGCCAGGCGCGCA GTCCGAACCACAAAGCCTTGCGCGACCGTACCGTGGCTGAAATAATCTGA CCAAAGCGCGTAGAATTAAAGTAAAGAAGTTCAGTCAGCCGGGAATGTTA TTTTTCGTTTTATTTTATTTTCTCTCTCACACACACGCACGCACGCGCTC ACTCAACCACACATCCCCGCGGCAAAGTGTCATTGGTGCTGAGTATCCAC GACGTTGGCGTTCCCTATAACGAACGCGACGCGCTCGCAGGGGTCCTCAG AAGCAGCCCCGCTACACCGTCTGCGTGTCGTCGCAAGTGGGGTGCGCCAT GAACTGCCAGTTCTGCTACACCGGGAGGCTCGGGCTCATGGCCAACCTGC AGGCCGCACAGGTTCGGTTTGATTTCGTTTGGTTCCGTTTCATGTCGTTT GGTTTTGTTCAGTTCGGTTCGGCACAGTTCTCTGTCGATGCCTTGGTTCG TCCCACGTAAGTGGGCTTGAAGTGATCGAACAATGCCAGGGGCGGAGGGG GCATGCTAGCCCGTAGGGCAACAGGGCATAATAAGTAGAAAACCCTTTTT CTCTCTCAAAAAGGGGGTGGTTTGGTACCGTCCCCGGCGTTGAACTTGGA GAAAGATTCATGGAAACCCCTCCCTCCCCCCCGGTCCTCTGTCGTCTTTG AATCACTAGTTAATTAGGTTAGATCGTGCGCGCGTCGGTCGTTCATTATT TTATTCCAGCGAGGAAGCTGATGGCGATGACCGTCGATCGCTTCGCTTCG TACGTACTGGAGGCCCAGTCGAGATCTTGCGAATGTTATCAAAGCCGAAG GCGGCGGGGGCAAGGGTTAAGGAGGGACGGGGAAGCAAGAGGGGGTACGC TTCGCCGCCTGTGCGAATAAGCCATTGGTGCGTCTTTATTTTTGCCACAG GAGTGATTGATATATCACGAGACTAATGGGTGACCCGCGCTACGTCGTCC CTCCAGATAAGACATAGTCACCATTTGTACCTGTCCAGCACTTTGATTAC CTGAGATACTCGATGTACCCTACCCGGGGACAACCAGAAGATACAACCTT GATATATCCTAGCTGGTGTGTGTGTGTTAGGGTCGGGTTGGATACATGGG GGCAAAACAAAAAAACGTCAACCGAATTCGAACTCGAGCCTAAAACATGG AGGCACCGGTTGACCCAACCCATCCCTACTCCGAACCCCGGCTAGGGTAT ACCAAGGCCAGTGCCCCTAGCGTGCCTCGGTCGATCAAAATGTGAAAATA TTTTGATACATGTCTGGATACGGCAGACTATTCGCTTCAGGGCGAAATAA TAATGATGATAATGCCCCACCCGGGGAGTACGATACCTCTACCGGAAGTT GAAATGGCTGGGGTCAGCCCCAGATCCCGAGGGCCGGCGAATCAAAAAGA CTTCTACCTAAAGCGCGATATTTTCATTCGTTTCTCGTTGATTGATTGAT TGATTGATGGGACTCATCCAGCCCCTCCCCCCCCCCCTCGCCGCCATCCC GAAATATGTTCCTGAAACGTTCGAAAATCGCGTTTGCCCAAGATGGTAGA GCAGGTACTGTCGGCCAAGCGATACCTGGAAAGCGTTGGGGATCCGGTGC CGGTGACCGGAGTGGTCTTCATGGGCATGGGAGAGCCCTTCGACAACTAT GACAGGTTGTAGCGGTGGTGGTTGGTGTTGACGCTGCTGTCGGGGTGTCG AGGCCGCACCGGGTATAAGAGGTAGACGAAGCTGAAGGTTGAATCAAGAG ATGAACGATCGATCGACAGTCAGAGCCGAGTTGCGTGGTCGAGGGATGAA AATGTTCATCCGCCGATGTCACCAGAAGCAATCGTCATACCTCTCCCCTT CTCCCTCGAAGCGACCGCGATTCTTTTCGTTTTTTACGACAACCACTTCG TGAGACTAGCGAACAAAAATTCCTCTCTCCCCCCCTATAGCCCAACCGGC GTGACGTCAGACGTCTTCTAATATTTCTCTCGCACGCGCGCGCACACACG ATGTGTCACACACACACACACACACACACACATACACACATACACACATA AACGCAGCGTGTCCGGCAAAAACTAGGCACGATGGGGATGCGCTGTATAT TTTCGTTATTATACAACACGCGTTTAACATAAGTACCCCCTCGTCCCCCC CCCCCCTCCCCCCCCTGCCTGACTCCCCCAGACGGTAAAAATAACAAATC TGCTATTATTTTTTTTTTTTTTCTCTGCTGGGTTTGTACAACGTCCGCAC CACGTCGCAGGGTCATGCGGGCGGTCAAGATCCTGACGGATCCGCGCGCC GGGGTGCGGCTGAGGGGGAGCAGCGTCACGGTGTCGACCGTCGGGCTCGT GCCAGAGATCGAGCGATTCTGCGCGGATCCCGACAACCGCGCCAGCCTGG CTGTGTCTCTGCACACCGTGTCGGGAGCAGTCAGGGACAAGGTGTGATTC CACTTGTTTGGAATGTTAAGAGTAGGAAGTGGAGGAAATTTGAAAGGGGT TTCGTGTCGTAATTTTTCATTGAGTGCTTGAGCATGGGGGGGGGGGGAAT TAGCCAGCTAGCTAGCTTAATTAATTAATCAATTTTAAGCTTCTGTTTTT TTTTATGGGGTGTTCATCTTGCAAGCTTGGCTATCATTTTTTTTAAGACT CCTAAAAGTTAGATCCGCACCGAAAAAGTACTCAACATATACTTCCATGT TGGAGTTGGGACGATTATTAAAAATATTTAAGTTAGTACCCGCTTTTTTT TCTGCGGATGCTCCCATTTTCGTCACTTTTTTCATAGTATTGTTATAATT TTCAATGTAAACATAGGTTGCCTTACGTTCCGCAAAAAACAAACAAACAA AAATACAAAATAGTTTTTGTATTTTAAAACAAACAACCAAAAATACGAAA TTGTTTTTTCATTTTGTTTGGGATGGCAGGAAGTATCACCTGAGATTTCC AGCGTTTGCATTATTCTACAACGACAGGAGCTACTAAATAAAAGCAGAAG AAAAAATAATTATTTTTTAATCATACTATTACTACCGTCGGGGGGACGTG GTGGCTCGTGAACTCACCGATGGACGGTGCTTTCTGTAAACCGTTGTTTT TCCTTGATAGCTCCATTTCACAGCTTCCAGGACCGTTGGAGTTACGGAGA GGCAGGAAGGCAGACAGAGAGGGGGGCGCAGGTTCGCCGAAGGTTTAGGC GGCAACGATGACCGCGGTGTTGTTCCGAAGGCGATAACAGAGGCTATACT AGATGCAGCCATGACGCTGTGGCCGAAAGATAAACGATGCTTCGCTCGCT TCCTCGCTTCGCAGGTGATCCCAATTAACAGACGCTACCCGCTAGAGCAG CTGTCGGAGACGCTGAGGAGACACTTCCCCGGACGATCCTCGGCTCTTCG GAAAACAGAAACGGACGGGTCGTCCTCCTACCAAGAAGCTTCGGAACGTT CCTCGGTACTATCCGCAGAGGAAGACAACGGGCGACGAGAGGGACCCCCC TCGCACCCGTCGAAGTCGAAGTCGAAACGCCAAGAACCGCGTCGGAAATC CCGAATCTTGGCCGTGGAGTACACCTTATTGGGAGGAGTCAACGACTCCG CGGATGACGCTGAGCGAGTGGCGGACTGGCTCGAGGGCATTCGCTGCGTG GTGAACCTGATCACGTTTAACCCTCACAAGGGCACGCCGTTCCGCCCGGC GTCGTTGGAGACTTCGAAGGCGTTCCGGCGAGCCTTGCTGGGGAGAGGGC TGCTATGTACCGTGAGAGACAGCCGCGGCGACGACGGAATGGCGGCCTGC GGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig11752:459..4714+

>mRNA_H-elongata_contig11752.1370.1 ID=mRNA_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at H-elongata_contig11752:459..4714+ (Himanthalia elongata Himel1 dioecious)
CAGGATGTGCAGCTCGCCTCCGACGGAACCCGGAAGCTGGTATCGGTGCT
CACGTCGGGGGAAGGGGTCGGGAAGAAAGTTGAGACGGTCATCATTCCCA
TGCTAAGCAGGATGTGCAGCTCGCCTCCGACGGAACCCGGAAGCTGGTAT
CGGTGCTCACGTCGGGGGAAGGGGTCGGGAAGAAAGTTGAGACGGTCATC
ATTCCCATGCTAAGGGGTCCTCAGAAGCAGCCCCGCTACACCGTCTGCGT
GTCGTCGCAAGTGGGGTGCGCCATGAACTGCCAGTTCTGCTACACCGGGA
GGCTCGGGCTCATGGCCAACCTGCAGGCCGCACAGGGGTCCTCAGAAGCA
GCCCCGCTACACCGTCTGCGTGTCGTCGCAAGTGGGGTGCGCCATGAACT
GCCAGTTCTGCTACACCGGGAGGCTCGGGCTCATGGCCAACCTGCAGGCC
GCACAGATGGTAGAGCAGGTACTGTCGGCCAAGCGATACCTGGAAAGCGT
TGGGGATCCGGTGCCGGTGACCGGAGTGGTCTTCATGGGCATGGGAGAGC
CCTTCGACAACTATGACAGGTTATGGTAGAGCAGGTACTGTCGGCCAAGC
GATACCTGGAAAGCGTTGGGGATCCGGTGCCGGTGACCGGAGTGGTCTTC
ATGGGCATGGGAGAGCCCTTCGACAACTATGACAGGTTGGTCATGCGGGC
GGTCAAGATCCTGACGGATCCGCGCGCCGGGGTGCGGCTGAGGGGGAGCA
GCGTCACGGTGTCGACCGTCGGGCTCGTGCCAGAGATCGAGCGATTCTGC
GCGGATCCCGACAACCGCGCCAGCCTGGCTGTGTCTCTGCACACCGTGTC
GGGAGCAGTCAGGGACAAGGGTCATGCGGGCGGTCAAGATCCTGACGGAT
CCGCGCGCCGGGGTGCGGCTGAGGGGGAGCAGCGTCACGGTGTCGACCGT
CGGGCTCGTGCCAGAGATCGAGCGATTCTGCGCGGATCCCGACAACCGCG
CCAGCCTGGCTGTGTCTCTGCACACCGTGTCGGGAGCAGTCAGGGACAAG
GTGATCCCAATTAACAGACGCTACCCGCTAGAGCAGCTGTCGGAGACGCT
GAGGAGACACTTCCCCGGACGATCCTCGGCTCTTCGGAAAACAGAAACGG
ACGGGTCGTCCTCCTACCAAGAAGCTTCGGAACGTTCCTCGGTACTATCC
GCAGAGGAAGACAACGGGCGACGAGAGGGACCCCCCTCGCACCCGTCGAA
GTCGAAGTCGAAACGCCAAGAACCGCGTCGGAAATCCCGAATCTTGGCCG
TGGAGTACACCTTATTGGGAGGAGTCAACGACTCCGCGGATGACGCTGAG
CGAGTGGCGGACTGGCTCGAGGGCATTCGCTGCGTGGTGAACCTGATCAC
GTTTAACCCTCACAAGGGCACGCCGTTCCGCCCGGCGTCGTTGGAGACTT
CGAAGGCGTTCCGGCGAGCCTTGCTGGGGAGAGGGCTGCTATGTACCGTG
AGAGACAGCCGCGGCGACGACGGAATGGCGGCCTGCGGGTGAGTGATCCC
AATTAACAGACGCTACCCGCTAGAGCAGCTGTCGGAGACGCTGAGGAGAC
ACTTCCCCGGACGATCCTCGGCTCTTCGGAAAACAGAAACGGACGGGTCG
TCCTCCTACCAAGAAGCTTCGGAACGTTCCTCGGTACTATCCGCAGAGGA
AGACAACGGGCGACGAGAGGGACCCCCCTCGCACCCGTCGAAGTCGAAGT
CGAAACGCCAAGAACCGCGTCGGAAATCCCGAATCTTGGCCGTGGAGTAC
ACCTTATTGGGAGGAGTCAACGACTCCGCGGATGACGCTGAGCGAGTGGC
GGACTGGCTCGAGGGCATTCGCTGCGTGGTGAACCTGATCACGTTTAACC
CTCACAAGGGCACGCCGTTCCGCCCGGCGTCGTTGGAGACTTCGAAGGCG
TTCCGGCGAGCCTTGCTGGGGAGAGGGCTGCTATGTACCGTGAGAGACAG
CCGCGGCGACGACGGAATGGCGGCCTGCGGGTGA
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