prot_H-elongata_contig61360.13689.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61360.13689.1
Unique Nameprot_H-elongata_contig61360.13689.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length281
Homology
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 4.880e-43
Identity = 107/278 (38.49%), Postives = 155/278 (55.76%), Query Frame = 0
Query:    3 ELVVATWNVRTMSERGTNSPGR-AEDLLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPK--MKSDHRLISVSIR 270
            +L   T+NVRT++  G N  G     ++   A  +CD I +QETRR G+  I     GY++  SG   G   K  + GVG++++E++  ++G GG   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+F TPK G      +    KE HR  +D+ L+RQ D RL RN +V       SDH L+  ++R
Sbjct:   89 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 360          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 3.520e-39
Identity = 98/252 (38.89%), Postives = 142/252 (56.35%), Query Frame = 0
Query:   28 LLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPK--MKSDHRLISVSIR 270
            ++   A  +CD I +QETRR G+  I     GY++  SG   G   K  + GVG++++E++  ++G GG   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+F TPK G      +    KE HR  +D+ L+RQ D RL RN +V       SDH L+  ++R
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 248          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.090e-37
Identity = 91/230 (39.57%), Postives = 134/230 (58.26%), Query Frame = 0
Query:   28 LLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLAR 250
            ++   A  +CD I +QETRR G+  I     GY++  SG   G   K  + GVG++++E++  ++G GG   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+  TPK G ++   + +G KE HR  +D+ L+RQ D RL R
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK-GVHTFQSSNKG-KEKHR--LDFILMRQTDRRLVR 224          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 3.010e-37
Identity = 93/253 (36.76%), Postives = 140/253 (55.34%), Query Frame = 0
Query:    3 ELVVATWNVRTMSERGTNSPGR-AEDLLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETAPT------RHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDYLVRQHDCRL 248
            +L   T+NV T++  G N  G     ++   +   CD I +QETRR+G+ +I     GY++  SG   G   K    GVG++++E+I  ++G  G   E IS  L+KVR+        TF+V YAPTET  +        K  FW  L + + EV   DHL++++GANARTG R +G    D +++G  GRD ++ NG RLL  A+ ++LS+  T+F TPK GG    F     K   ++R+D+++ Q D RL
Sbjct:    8 DLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDG--CCDAKIMGANGRDIMNNNGERLLELASDNQLSLTNTYFPTPK-GGVQHTFQSSN-KGKEKYRLDFILMQ-DSRL 253          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.910e-32
Identity = 96/285 (33.68%), Postives = 146/285 (51.23%), Query Frame = 0
Query:    3 ELVVATWNVRTMSERGTNSPGR-AEDLLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETAPT-----RHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPKMKSDHRLISVSIRLLDGTHPTAA 280
            ++   T+NVRT++  G N  G     ++   +   CD I +QETRR+G+ +I     GY+V  SG   G   K  + GVG++++E++  + G  G   E IS  L+KVR+        TF+V YAP     T       K   W  L + + EV   DHL++++ ANA TGGR +G    D +++G YGRD ++ NG R L  A  ++LS+  T+F TPK GG    F     K   ++ +D+ L+RQ D R  +   VH +  +     S   + L G   T+A
Sbjct:  122 DVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHD--GYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDG--CCDAKIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYGLDFILMRQTDRRFVQRL-VHERSAARDSEASKEKQQLRGVSKTSA 399          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.040e-31
Identity = 91/245 (37.14%), Postives = 135/245 (55.10%), Query Frame = 0
Query:   42 IQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETAPT------RHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPK--MKSDHRLISVSIRLLDGTHP 277
            +QETRR G+ +I     GY++  SG   G   K  + GVG++++E++  ++G  G   E IS  L+KVR+        TF+V YAP ETA T        K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  A+ ++LS+  T+F TP+ GG    F     K   ++R+D+ L+RQ D R  RN +V       SD  L+  ++RL     P
Sbjct:   12 LQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPMETARTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPE-GGVQHTFRSSN-KGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDQYLVLTTVRLSPRVAP 250          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.100e-26
Identity = 80/197 (40.61%), Postives = 109/197 (55.33%), Query Frame = 0
Query:   85 RESIARALG--PGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPK--MKSDHRLISVSIR 270
            R+ I  A G   GG   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+F TPK G      +    KE HR  +D+ L+RQ D RL RN +V       SDH L+  ++R
Sbjct:  289 RKRIGEAAGGGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLERNASVKRVDFKDSDHNLVHTTVR 481          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KRE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 8.280e-26
Identity = 89/278 (32.01%), Postives = 132/278 (47.48%), Query Frame = 0
Query:    3 ELVVATWNVRTMSERGTNSPGR-AEDLLMFAAKYECDFIAIQETRRDGRTTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETAPT------RHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGP-KESHRWRMDY-LVRQHDCRLARNTTVH--PKMKSDHRLISVSI 269
            +L   T++VRT++  G N  G     ++   +   CD + +QETRR G+        G I H       DG                           E IS  L+KVR+        TF+V YAP +T  T        K  FW  L + + E    DHL++++GANARTG R +G    D +++G YGRD ++ NG RLL  A+ + LS+  T+F TP+ G      T++ P K   ++R+D+ L+RQ D R  RN +V       SDH L+  ++
Sbjct:   62 DLSFGTFDVRTLAYSGRNPIGHNVMTVMQICSATGCDVMGLQETRRKGQ--------GSIAH-------DG-------------------------TVECISPRLMKVRLTIGRTCGVTFVVGYAPAKTVRTTAGGDLNAKDSFWTALDAALREFQSRDHLVVLMGANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNHLSLTNTYFRTPEGGVRH---TFQSPNKGKEKYRLDFILMRQTDRRFVRNVSVKRIDFKDSDHNLVLTTV 294          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 8.790e-25
Identity = 74/189 (39.15%), Postives = 106/189 (56.08%), Query Frame = 0
Query:   91 ALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDY-LVRQHDCRLARNTTVHPKM--KSDHRLISVSIR 270
            ++G  G   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+F TPK GG    F     K   ++R+D+ L+RQ D R  RN +V       +DH L+  ++R
Sbjct:    4 SVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQTDRRFVRNVSVKSVAFKDADHNLVHTTVR 188          
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Match: A0A6H5KDU8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.120e-23
Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   91 ALGPGGIVPEHISAWLVKVRVIFKHRAVTTFIVVYAPTETA------PTRHKSKFWKELRSTVAEVPVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACAAKHKLSIVITFFSTPK 216
            ++G GG   E IS  L+KVR+        TF+V YAPTETA          K  FW  L + + EV   DHL++++ ANARTG R +G    D +++G YGRD ++ NG RLL  AA ++LS++ T+F TPK
Sbjct:    4 SVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CSDAKIMGAYGRDVMNNNGERLLGLAADNRLSLINTYFRTPK 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61360.13689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE4.880e-4338.49Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KC90_9PHAE3.520e-3938.89Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KP87_9PHAE2.090e-3739.57Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KZE6_9PHAE3.010e-3736.76Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KDU4_9PHAE1.910e-3233.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K6H7_9PHAE1.040e-3137.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDI8_9PHAE2.100e-2640.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KRE7_9PHAE8.280e-2632.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL25_9PHAE8.790e-2539.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDU8_9PHAE3.120e-2343.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 5..271
e-value: 3.6E-19
score: 71.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 3..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61360contigH-elongata_contig61360:2275..3117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61360.13689.1mRNA_H-elongata_contig61360.13689.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61360 2275..3117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61360.13689.1 ID=prot_H-elongata_contig61360.13689.1|Name=mRNA_H-elongata_contig61360.13689.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
SKELVVATWNVRTMSERGTNSPGRAEDLLMFAAKYECDFIAIQETRRDGR
TTIQEPSAGYIVHCSGHCDGDGGKPWILGVGLSVRESIARALGPGGIVPE
HISAWLVKVRVIFKHRAVTTFIVVYAPTETAPTRHKSKFWKELRSTVAEV
PVSDHLILMVGANARTGGREEGGGLGDVRVLGPYGRDTLDGNGPRLLACA
AKHKLSIVITFFSTPKRGGNSDAFTYEGPKESHRWRMDYLVRQHDCRLAR
NTTVHPKMKSDHRLISVSIRLLDGTHPTAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf