prot_H-elongata_contig61319.13684.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61319.13684.1
Unique Nameprot_H-elongata_contig61319.13684.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.770e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            KTAFDVDIDG+EEQPWRHPGVDIADFFNYGFTE+SWRVYCEKQLR
Sbjct:  336 KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 380          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.690e-24
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            KTAFDVDIDG+EEQPWRHPGVDIADFFNYGFTE+SWRVYCEKQLR
Sbjct:  335 KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 379          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 82.0 bits (201), Expect = 2.500e-17
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            +TAFDVDID LEE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  140 RTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQ 184          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.680e-17
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            +TAFDVDID LEE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  129 RTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQ 173          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 82.0 bits (201), Expect = 3.640e-17
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            +TAFDVDID LEE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  143 RTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQ 187          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.860e-17
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLR 45
            +TAFDVDID LEE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  139 RTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQ 183          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: UPI00155B1E59 (LOW QUALITY PROTEIN: FIP1[V]-like protein n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155B1E59)

HSP 1 Score: 81.3 bits (199), Expect = 1.080e-16
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEK--QLR 45
            KT FDVDID  EE+PWRHPGVDI+DFFN+GF EESW+ YC++  QLR
Sbjct:   99 KTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 145          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: F6HYI9_VITVI (Fip1 domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=F6HYI9_VITVI)

HSP 1 Score: 81.3 bits (199), Expect = 1.080e-16
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEK--QLR 45
            KT FDVDID  EE+PWRHPGVDI+DFFN+GF EESW+ YC++  QLR
Sbjct:  412 KTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 458          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A0A438IHG8_VITVI (FIP1[V]-like protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IHG8_VITVI)

HSP 1 Score: 79.3 bits (194), Expect = 2.020e-16
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    2 TAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEK--QLR 45
            T FDVDID  EE+PWRHPGVDI+DFFN+GF EESW+ YC++  QLR
Sbjct:   23 TIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 68          
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Match: A5C7M9_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C7M9_VITVI)

HSP 1 Score: 79.3 bits (194), Expect = 5.160e-16
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    2 TAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEK--QLR 45
            T FDVDID  EE+PWRHPGVDI+DFFN+GF EESW+ YC++  QLR
Sbjct:   62 TIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61319.13684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU95_ECTSI1.770e-2495.56Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JF87_9PHAE2.690e-2495.56Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A067C040_SAPPC2.500e-1775.56Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A1W0A514_9STRA2.680e-1775.56Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
T0QKY1_SAPDV3.640e-1775.56Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A1V9YWA6_9STRA3.860e-1775.56Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
UPI00155B1E591.080e-1672.34LOW QUALITY PROTEIN: FIP1[V]-like protein n=1 Tax=... [more]
F6HYI9_VITVI1.080e-1672.34Fip1 domain-containing protein n=2 Tax=Vitis TaxID... [more]
A0A438IHG8_VITVI2.020e-1671.74FIP1[V]-like protein n=1 Tax=Vitis vinifera TaxID=... [more]
A5C7M9_VITVI5.160e-1671.74Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 5..45
e-value: 1.4E-23
score: 82.1
NoneNo IPR availablePANTHERPTHR36884FAMILY NOT NAMEDcoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61319contigH-elongata_contig61319:738..890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61319.13684.1mRNA_H-elongata_contig61319.13684.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61319 738..890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61319.13684.1 ID=prot_H-elongata_contig61319.13684.1|Name=mRNA_H-elongata_contig61319.13684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
KTAFDVDIDGLEEQPWRHPGVDIADFFNYGFTEESWRVYCEKQLRCVSFT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom