mRNA_H-elongata_contig61318.13683.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: D7FVW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW2_ECTSI) HSP 1 Score: 295 bits (756), Expect = 7.830e-100 Identity = 142/181 (78.45%), Postives = 163/181 (90.06%), Query Frame = 1
Query: 1 RTGNAAKIYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQPRDEVVDPEPPKPSEALAHWSNH 543
R G AAK+ R+NLPP+G+SLTEC+P AAGFIAD DRFHSDTVGEE LRRKAQH+R+VQIN N+RQLRVEREGKRWEDMEKK+ D +RW+RLR +GEKSKKNKSGVPYNMISL YNDGLDG R+E+ DN+ KHRAQ+RSNNLTRLGDSRCGYNILTGQPR+E+VDP PKPS+A+A WS+H
Sbjct: 23 RAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERKVQINDNRRQLRVEREGKRWEDMEKKEGDDEQRWNRLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNVTKHRAQVRSNNLTRLGDSRCGYNILTGQPREEIVDPPVPKPSDAVALWSHH 203
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A835Z1N9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N9_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.390e-51 Identity = 93/190 (48.95%), Postives = 118/190 (62.11%), Query Frame = 1
Query: 1 RTGNAAKIYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQPRDEVVDPEPPKPSEALA---------HWSNH 543
R G AA+ YR+NLPP+G+SLTE P AAGFIAD DRFH+D VGEE +RR A+H+RR QI ++R+ + +RE RW +M +G K+KKN SG+PY+MISL Y G DG R+ H+D L +HRA +RSN L+RLGD R GYNI++G P DP P A A HW H
Sbjct: 23 RAGRAAREYRDNLPPEGVSLTEAHPGAAGFIADADRFHTDVVGEELVRRTAEHERRQQIVDHRRRQKQDREENRWTEMRXXXXXXXXXXXXXXXEGVKAKKNASGIPYDMISLTYRKGADGARLRHDDALTQHRAALRSNQLSRLGDGRSGYNIISGAPCAPRADPPRPLSQAAPAXXXXXXXGAHWMAH 212
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A7S2XXX1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXX1_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.930e-50 Identity = 86/163 (52.76%), Postives = 111/163 (68.10%), Query Frame = 1
Query: 1 RTGNAAKIYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQPRDEV 489
R G+ AKIYREN P +G+ L P AAGFI+D DRFHSDT GEE LRR+A+ R+V+ +R ++RE +RW+ ++ AD E+W+R+R KSKKNKS VPYN I+L YNDG DG+R+ D + RA MR N+ R GD+RCGYNILTG+ R E
Sbjct: 53 RAGHQAKIYRENAPVEGVGLLGLPPDAAGFISDADRFHSDTSGEELLRRQAEQARKVEFYEKRRAKNIDREEERWQKIKDDKIADEEKWNRMREMEVKSKKNKSAVPYNAITLQYNDGHDGERLRQEDQRTRDRAHMRQQNMARHGDTRCGYNILTGEARSET 215
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A7S4ECF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECF0_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.680e-35 Identity = 74/176 (42.05%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 1 RTGNAAKIYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQPRDEVVDPEPPKPSEALA 528
RTG AAK+YREN P L P AAGF+AD DRFH+D GE++LRR A+ + + R R + E +RW ++++ + W R G K+K+N S VP++M++L Y+D LDG+R+ ++D+ +++RA +RS+NL + G SR GY+ILTG + P P+ S ALA
Sbjct: 61 RTGLAAKMYRENAPDTSDGLVVPRPDAAGFMADSDRFHTDVAGEDKLRRDAKIKQDYLRREHTRLERAKAEEQRWARIQQEKANEEANWLAERQAGIKAKRNASSVPFDMVTLQYHDSLDGERLRYHDDKVRYRAAVRSSNLLKNGGSRAGYDILTGGDVRGLQKPSYPQASGALA 236
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A067C5C9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5C9_SAPPC) HSP 1 Score: 119 bits (297), Expect = 1.950e-30 Identity = 61/152 (40.13%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 22 IYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQP 477
R + G ++T +P + GF++D DRFH+D GEE++ R+++H + + ++R+ RE +RW+ M+ K + +RWDRLR DG K+++NK+ YN+++L YNDG DG+R+ DN I+HRA +R+ NL + +SR G N +TG P
Sbjct: 35 FIRVDTSISGSAMTVQAPGSQGFMSDADRFHTDVAGEEKVLRESRHAKHQLVYDHKRRDNQLREDQRWKTMDAKAAEEKQRWDRLRDDGGKARRNKASCDYNLVTLKYNDGKDGERLMKADNEIRHRATVRAANL-QFQNSRAGINPITGDP 185
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A1W0A626_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A626_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.010e-29 Identity = 59/143 (41.26%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 49 GLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQP 477
G ++T +P + GF++D DRFH+D GEE++ R+++ + + N+RQ RE +RW+ M+ K + +RWDR+R DG K+++NKS +N+++L YNDG DG R++ D+ I+HRA +R+ NL + +SR G N +TG P
Sbjct: 44 GSAMTVQAPGSQGFMSDADRFHTDVAGEEKVVRESRMAKHQMVYDNKRQNNQIREEQRWKTMDAKAAEERQRWDRMREDGGKARRNKSSCEFNLVTLKYNDGKDGDRLKKADSEIRHRATVRAANL-QFQNSRAGINPITGDP 185
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A1V9YB29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB29_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.450e-28 Identity = 59/152 (38.82%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 22 IYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQP 477
R + G ++TE + + G+++D DRFH+D GEE++ R+++ + + ++RQ RE +RW+ M+ K + +RWDRLR DG K+++NKS +N+++L YNDG DG+R+ D+ I+HRA +R+ NL + +SR G N +TG P
Sbjct: 35 FIRVDTSISGAAMTEQAHGSQGYMSDADRFHTDVAGEEKVARESRTAKHQLVYDHKRQNNQLREEQRWKAMDAKSAEEKQRWDRLRDDGGKARRNKSSCDFNLVTLKYNDGKDGERLMKADSEIRHRAAVRAANL-QFQNSRAGINPITGDP 185
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A6G0XI40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI40_9STRA) HSP 1 Score: 107 bits (266), Expect = 8.310e-26 Identity = 59/147 (40.14%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 49 GLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQPRDEV 489
G ++T + + G+++D DRFH+D GEE++ R+++ R +R+ RE RW+ M+ K D RWD LR DG K+++NKS +N I+L YNDG DG+R+ D+ I+HRA +R+ NL + SR G N +TG P V
Sbjct: 44 GSAMTVQAAGSQGYMSDADRFHTDVAGEEKVLRESRIARHQMTYDTRRRSNQLREEHRWQAMDAKAAEDKARWDHLRQDGGKARRNKSSCEFNPITLKYNDGKDGERLRQADSEIRHRASLRAANL-QYNSSRAGINPITGDPVPRV 189
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: A0A662WDK2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDK2_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.800e-26 Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 22 IYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLR---VEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQP--RDEVVDPEPP 507
R + G ++ +PQ+ G+++D DRFHSDT GEE R A+ D R ++ Q R V R+ +RWE M+ + +R LR+ G K+++NK G P+N ++L YNDG DG+R++ D +KHRA +R+ NL SR G N +TG P R + D PP
Sbjct: 43 FVRVDTSATGSAMLVYAPQSQGYMSDADRFHSDTAGEE---RAAREDARARVKVQQEHRRHESVNRDVRRWEAMDAASAEEKQRXXXLRASGSKARRNKCGEPFNPVTLRYNDGKDGERLQAADVAVKHRATLRAQNLQHHN-SREGINPITGAPIRRVQTRDLLPP 205
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Match: D0NCH5_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NCH5_PHYIT) HSP 1 Score: 107 bits (267), Expect = 9.940e-26 Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 22 IYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKAQHDRRVQINANQRQLRVEREGKRWEDMEKKDEADIERWDRLRSDGEKSKKNKSGVPYNMISLMYNDGLDGQRMEHNDNLIKHRAQMRSNNLTRLGDSRCGYNILTGQ 474
R + G ++ +PQ+ GF++D DRFHSDT GEE+ R+ R +R+ V R+ +RW+ M+ D R + LR+ G K+++NK G P+N+I+L YNDG DGQR++ D IK RA +R+ NL + +SR G N +TG+
Sbjct: 48 FVRVDTSAAGSAMLVYTPQSQGFMSDADRFHSDTAGEERAAREGTRARARMQQDRRRREAVNRDVRRWDAMDAAAAEDKRRGEALRASGSKARRNKGGEPFNLITLKYNDGKDGQRLQAADAAIKQRAMLRAQNL-QYHNSREGINPITGE 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61318.13683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61318.13683.1 >prot_H-elongata_contig61318.13683.1 ID=prot_H-elongata_contig61318.13683.1|Name=mRNA_H-elongata_contig61318.13683.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp RTGNAAKIYRENLPPDGLSLTECSPQAAGFIADVDRFHSDTVGEEQLRRKback to top mRNA from alignment at H-elongata_contig61318:336..2106+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61318.13683.1 ID=mRNA_H-elongata_contig61318.13683.1|Name=mRNA_H-elongata_contig61318.13683.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1771bp|location=Sequence derived from alignment at H-elongata_contig61318:336..2106+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61318:336..2106+ >mRNA_H-elongata_contig61318.13683.1 ID=mRNA_H-elongata_contig61318.13683.1|Name=mRNA_H-elongata_contig61318.13683.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig61318:336..2106+ (Himanthalia elongata Himel1 dioecious)back to top |