prot_H-elongata_contig61296.13679.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61296.13679.1
Unique Nameprot_H-elongata_contig61296.13679.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
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BLAST of mRNA_H-elongata_contig61296.13679.1 vs. uniprot
Match: D7FPG7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG7_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 5.000e-98
Identity = 153/201 (76.12%), Postives = 169/201 (84.08%), Query Frame = 0 
Query:    1 DAYWLEYGHHWVMRYTAASDVRVVLLGLLTLISFFVYGVQQTRYTTAVQYLRKAAEKNIGPKQGGNAATMQLRREAEALLAQRKGEQL--KKDGVDPKGSKA-KQSRKEKEAELAEVIAELALQVDIKGSCRKPTWDDQPVVILAMLPYYTATYLWHKAQLLKAALLKREVNEAERAYWACRKVGKNTWEGLDDEARCVLS 198
            DAYWLEYGHHWVMRY +ASDVR VLLGLL L+SFF YG+Q TRYTTAV+YLRKAAEKN+GPK GGNAATMQLRREAEALLA+RKGE    KK+GV  KGSK  KQSRKEKEAELAEVIAEL+LQV+IKGSCRKPTW DQPVV+LAMLP +TATYLWHK QL+ + L KREV  +ER YWA R VG +TW+ LD E R   S
Sbjct:  112 DAYWLEYGHHWVMRYASASDVRGVLLGLLVLVSFFAYGIQHTRYTTAVRYLRKAAEKNLGPKSGGNAATMQLRREAEALLAERKGEAQGGKKNGVGSKGSKVVKQSRKEKEAELAEVIAELSLQVEIKGSCRKPTWRDQPVVLLAMLPVHTATYLWHKFQLVTSKLTKREVTASEREYWARRSVGSSTWDDLDAETRATAS 312
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BLAST of mRNA_H-elongata_contig61296.13679.1 vs. uniprot
Match: A0A482UVG0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVG0_9ARCH)

HSP 1 Score: 52.8 bits (125), Expect = 7.620e-6
Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 0 
Query:    8 GHHWVMRYTAASDVRVVLLGLLTLISFFVYGVQQTRYTTAVQYLRKAAEKNIGPKQGGNAATMQLRREAEAL 79
            G H+  R    SDVRV++L ++ L+S+F + VQ ++Y  AV+ +++A E N+  K GG   T++L R A  +
Sbjct:   17 GQHYY-RNLPKSDVRVIILVVVALLSWFFHSVQYSKYQRAVKLIKRATENNLSLKNGGTKQTIELYRRASEM 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61296.13679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPG7_ECTSI5.000e-9876.12Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A482UVG0_9ARCH7.620e-637.50Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availablePANTHERPTHR44176FAMILY NOT NAMEDcoord: 4..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61296contigH-elongata_contig61296:274..1877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61296.13679.1mRNA_H-elongata_contig61296.13679.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61296 274..1877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61296.13679.1 ID=prot_H-elongata_contig61296.13679.1|Name=mRNA_H-elongata_contig61296.13679.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
DAYWLEYGHHWVMRYTAASDVRVVLLGLLTLISFFVYGVQQTRYTTAVQY
LRKAAEKNIGPKQGGNAATMQLRREAEALLAQRKGEQLKKDGVDPKGSKA
KQSRKEKEAELAEVIAELALQVDIKGSCRKPTWDDQPVVILAMLPYYTAT
YLWHKAQLLKAALLKREVNEAERAYWACRKVGKNTWEGLDDEARCVLS
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