mRNA_H-elongata_contig61286.13677.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig61286.13677.1
Unique NamemRNA_H-elongata_contig61286.13677.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: D7FWJ2_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ2_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 2.070e-114
Identity = 173/282 (61.35%), Postives = 210/282 (74.47%), Query Frame = 1
Query:    1 RATINSLSRSDSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKA-ATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVI---CTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            R T+++L R   AI++VLHAGDL+YA+C +ERWDSF+ MLDPVAS +PWMVAAGNHEIEA  GST  G F A++HRFRMP+  PAV G ECG+ GGLDGN TACG GL D     A A ++  A   GE + +AVL AREA+ P+  PV ++GWPE++  GG    G  + +   C+ SEWSGTYDFGNSFYSFDVASVHVVVLNPYTA+GEGS+Q SWL+ DL   DRS TPW++ MFHCPW+NSNL H  ER A TAM  ME +LFQH+ +L I+GHVH 
Sbjct:  192 RNTLDALGRHQPAIDVVLHAGDLAYAECIQERWDSFMRMLDPVASHVPWMVAAGNHEIEA--GSTSSGPFAAFQHRFRMPSEAPAVRGFECGVAGGLDGNRTACGPGLNDLSTKGASAKESEAAEFGGEWMTQAVLGAREAVAPFERPVSSTGWPESEGGGGEEDEGEVEGLVPKCSPSEWSGTYDFGNSFYSFDVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMHAMEPVLFQHKASLAIAGHVHA 471          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: D8LBI4_ECTSI (Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI4_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 5.950e-90
Identity = 157/275 (57.09%), Postives = 179/275 (65.09%), Query Frame = 1
Query:   31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAG-PAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAAN------AGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            D++I+LVLHAGDLSYADC + RWDSF+ MLDPVASR+PWMVAAGNHEIE +        F AYE RFRMPA G P   G  CG GGGLDG+G  CG G G   A  AA + A           GEGVA             RG  V   +  T   G   +     V C  SEWSGTYD+GNSFYSFDV  VHVV LNPYTA+GE S+Q SWL  DL + DR+LTPW++VM HCPWYNSNL HQ ERQA TAMR ME LL QH+ A++I+GHVH 
Sbjct:  203 DNSIDLVLHAGDLSYADCDQPRWDSFMRMLDPVASRLPWMVAAGNHEIETNGAYPGAKPFLAYESRFRMPAVGAPTDLGRGCGAGGGLDGDGYLCGEGWGADEADAAAIEEAERLSSPVGTRGGEGVAAGNTVGAAVRQAARG--VRMAFDAT---GEGSEDEQPPVSCCPSEWSGTYDYGNSFYSFDVGPVHVVALNPYTATGENSVQYSWLQKDLESADRALTPWLVVMMHCPWYNSNLAHQGERQAETAMRAMEPLLHQHKAAVVITGHVHA 472          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A6H5KE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE14_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.780e-79
Identity = 126/221 (57.01%), Postives = 158/221 (71.49%), Query Frame = 1
Query:  184 AGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGD-TVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVI---CTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            AGST  G F A++HRFRMP+  PAV G ECG+ GGLDGN TACG GL D +    +  ++  A   GE + +AVL AREA+ P+  PV ++GWPE++ +GG    G    +   C+ SEWSGTYDFGNSF   DVASVHVVVLNPYTA+GEGS+Q SWL+ DL   DRS TPW++ MFHCPW+NSNL H  ER A TAMR ME +LFQ++ +L+++GHVH 
Sbjct:    7 AGSTTSGPFAAFQHRFRMPSEAPAVRGFECGVAGGLDGNRTACGPGLNDLSTKGTSVKESEAADFGGEWMTQAVLGAREAVDPFERPVSSTGWPESEGEGGEEDEGEVDGLVPKCSPSEWSGTYDFGNSF---DVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMRAMEPVLFQNKASLVVAGHVHA 224          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A835YVM8_9STRA (Purple acid phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 6.990e-65
Identity = 122/263 (46.39%), Postives = 151/263 (57.41%), Query Frame = 1
Query:   46 LVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            +VLHAGDL+YADC+++RWDS+  + +  A+R+PWM AAGNHEIE +  + +   FTAYE R+ MPAA P V                              A  + +A   GEG    V H     +  +         + K    A QAG     CT SEW G YDFGNSFYSFDVA+ HVVVLNPYT +  GS QQ WL ADL A DRS+TPW+IV+ HCPWYNSN  HQ E QA+    +ME ++   R AL+ISGHVH 
Sbjct:  144 VVLHAGDLAYADCEQDRWDSYGRLAEAAAARVPWMTAAGNHEIELEPSTGLA--FTAYEARYAMPAARPPVV----------------------------RAPPSMSAAATGEGGDSPVGHEGSNFVDKK---------QIK----ARQAGG--YACTPSEWLGRYDFGNSFYSFDVATAHVVVLNPYTPARAGSPQQRWLAADLAALDRSVTPWLIVITHCPWYNSNFAHQLESQAVAMKESMEGMIADARAALVISGHVHA 361          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A7S2CG88_9STRA (Purple acid phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG88_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.530e-52
Identity = 100/265 (37.74%), Postives = 129/265 (48.68%), Query Frame = 1
Query:   40 IELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            I  VLHAGDL+YADC++ RWDS+  M+ P ASR+PWMV  GNHEIE D     G  FTA+E RFRMPA   AV                                                    +A  P  G                         CT SE+ G YD+GNSF+SFD   VH++ +N YT +  GS Q  W+++DL A +R  TPW+ V+FHCPWYNS+ DHQ E QA++    +E +   +RV  + +GHVH 
Sbjct:  137 IAAVLHAGDLAYADCKDTRWDSWSQMVQPAASRLPWMVCPGNHEIETD--KFTGATFTAFEARFRMPAVAQAV----------------------------------------------------QAPSPTEGE------------------------CTPSEFMGVYDYGNSFFSFDYGPVHIIFMNSYTNASAGSAQYGWVVSDLSAVNRVKTPWVFVLFHCPWYNSDDDHQDEFQAVSMQAALEPVFLNYRVNAVFTGHVHA 323          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A482RNP1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNP1_9ARCH)

HSP 1 Score: 167 bits (423), Expect = 1.020e-45
Identity = 90/265 (33.96%), Postives = 130/265 (49.06%), Query Frame = 1
Query:   40 IELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRTMESLLFQHRVALIISGHVHG 834
            + ++LHAGDLSYADC +  WD +  +++ +A   PWMV  GNHEIE +   T G  F A+E R++MPA  PA  G                       + +   TD                              +SG P                 C +S +   Y++GNSFYSF+  S HV+ LNPY+ +   S+Q +WL+ DL   +R +TPW+IV+ HCPWYNSN  H  E QA+    +ME + +++RV ++ +GHVH 
Sbjct:   98 LSMILHAGDLSYADCNQPVWDQYGVLIEDLAKLRPWMVGPGNHEIEFN---TDGSTFLAFEERYKMPAIKPAEIGK----------------------ITIPPGTD------------------------------SSGHP----------------YCASSVFQQDYNYGNSFYSFEAGSAHVIFLNPYSTTDASSVQYNWLVQDLQGVNREVTPWVIVVMHCPWYNSNQAHYGELQAVLMRESMEEVFYKNRVNIVFTGHVHA 291          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A812QP08_SYMMI (Purple acid phosphatase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QP08_SYMMI)

HSP 1 Score: 159 bits (401), Expect = 3.970e-41
Identity = 98/272 (36.03%), Postives = 132/272 (48.53%), Query Frame = 1
Query:   31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDR--SLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT--MESLLFQHRVALIISGHVHG 834
            D +++++LHAGD++YAD +  RWDS+   ++P++SR+ WMV  GNHEIE+D  +  G  F AYE RF MPA  PA                                                     E+    R     S WP     G           CT S +SG+YD+GNSFY+ D     V+ LN YT +G  S Q +WL  +L A  R  + TPW+IVM HCP+Y+SN+ HQ+E QA+        E LL  H  A++ISGHVH 
Sbjct:  169 DRSLQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYT--GESFKAYEARFAMPAVQPA-----------------------------------------------------ESRPSKRQIGCQSPWPRGSHPG---------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAIEMRDAHGFEDLLHAHAAAVVISGHVHA 376          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A1Q9EB14_SYMMI (Purple acid phosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EB14_SYMMI)

HSP 1 Score: 159 bits (401), Expect = 3.800e-40
Identity = 98/272 (36.03%), Postives = 132/272 (48.53%), Query Frame = 1
Query:   31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDR--SLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT--MESLLFQHRVALIISGHVHG 834
            D +++++LHAGD++YAD +  RWDS+   ++P++SR+ WMV  GNHEIE+D  +  G  F AYE RF MPA  PA                                                     E+    R     S WP     G           CT S +SG+YD+GNSFY+ D     V+ LN YT +G  S Q +WL  +L A  R  + TPW+IVM HCP+Y+SN+ HQ+E QA+        E LL  H  A++ISGHVH 
Sbjct:  169 DRSLQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYT--GESFKAYEARFAMPAVQPA-----------------------------------------------------ESRPSKRQIGCQSPWPRGSHPG---------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAIEMRDAHGFEDLLHAHAAAVVISGHVHA 376          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A024UBB1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBB1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.980e-40
Identity = 97/269 (36.06%), Postives = 124/269 (46.10%), Query Frame = 1
Query:   31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT-MESLLFQHRVALIISGHVHG 834
            +SA+  VL AGDLSYAD  + RWD++ ++++P  S IPWM+AAGNHEIE    ST    F AY+ R+RMP A                                                                                 ++ A++              GN FYSFDVASVHVVVL PY  +  GS Q  W+  DL   DRS+TPWI+VM H PWY+SN  HQ++ +   AMR  ME LLF HRV L+++GHVH 
Sbjct:   26 NSAVRAVLLAGDLSYADTVQTRWDTWGSLVEPSTSCIPWMMAAGNHEIETSCHSTT---FDAYQARYRMPFA---------------------------------------------------------------------------------ESNASR--------------GNLFYSFDVASVHVVVLTPYLPTYRGSAQYKWVGRDLERVDRSVTPWIVVMMHGPWYSSNRAHQSKVEPQHAMRKDMEDLLFDHRVHLVLAGHVHS 196          
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Match: A0A024UCE4_9STRA (Purple acid phosphatase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCE4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.420e-38
Identity = 97/269 (36.06%), Postives = 124/269 (46.10%), Query Frame = 1
Query:   31 DSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWMVAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGNGTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVTSGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVLNPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAERQALTAMRT-MESLLFQHRVALIISGHVHG 834
            +SA+  VL AGDLSYAD  + RWD++ ++++P  S IPWM+AAGNHEIE    ST    F AY+ R+RMP A                                                                                 ++ A++              GN FYSFDVASVHVVVL PY  +  GS Q  W+  DL   DRS+TPWI+VM H PWY+SN  HQ++ +   AMR  ME LLF HRV L+++GHVH 
Sbjct:  185 NSAVRAVLLAGDLSYADTVQTRWDTWGSLVEPSTSCIPWMMAAGNHEIETSCHSTT---FDAYQARYRMPFA---------------------------------------------------------------------------------ESNASR--------------GNLFYSFDVASVHVVVLTPYLPTYRGSAQYKWVGRDLERVDRSVTPWIVVMMHGPWYSSNRAHQSKVEPQHAMRKDMEDLLFDHRVHLVLAGHVHS 355          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61286.13677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWJ2_ECTSI2.070e-11461.35Purple acid phosphatase n=1 Tax=Ectocarpus silicul... [more]
D8LBI4_ECTSI5.950e-9057.09Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KE14_9PHAE1.780e-7957.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVM8_9STRA6.990e-6546.39Purple acid phosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CG88_9STRA1.530e-5237.74Purple acid phosphatase n=1 Tax=Dictyocha speculum... [more]
A0A482RNP1_9ARCH1.020e-4533.96Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812QP08_SYMMI3.970e-4136.03Purple acid phosphatase n=4 Tax=Symbiodinium TaxID... [more]
A0A1Q9EB14_SYMMI3.800e-4036.03Purple acid phosphatase n=1 Tax=Symbiodinium micro... [more]
A0A024UBB1_9STRA4.980e-4036.06Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024UCE4_9STRA1.420e-3836.06Purple acid phosphatase n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61286contigH-elongata_contig61286:194..3435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.6
Seed ortholog evalue8.6e-95
Seed eggNOG ortholog2880.D7FWJ2
KEGG koko:K22390
EggNOG free text desc.acid phosphatase activity
EggNOG OGsCOG1409@1,KOG1378@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionacid phosphatase/ protein serine/threonine phosphatase
Ec32 orthologEc-26_006410.1
Exons4
Model size852
Cds size852
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61286.13677.1prot_H-elongata_contig61286.13677.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig61286 194..3435 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930988.880232-CDS-H-elongata_contig61286:193..2831622930988.880232-CDS-H-elongata_contig61286:193..283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 194..283 +
1691679652.5024378-CDS-H-elongata_contig61286:193..2831691679652.5024378-CDS-H-elongata_contig61286:193..283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 194..283 +
1622930988.9038324-CDS-H-elongata_contig61286:758..12251622930988.9038324-CDS-H-elongata_contig61286:758..1225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 759..1225 +
1691679652.5135093-CDS-H-elongata_contig61286:758..12251691679652.5135093-CDS-H-elongata_contig61286:758..1225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 759..1225 +
1622930988.9221444-CDS-H-elongata_contig61286:1534..16311622930988.9221444-CDS-H-elongata_contig61286:1534..1631Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 1535..1631 +
1691679652.5222774-CDS-H-elongata_contig61286:1534..16311691679652.5222774-CDS-H-elongata_contig61286:1534..1631Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 1535..1631 +
1622930988.9470036-CDS-H-elongata_contig61286:3237..34351622930988.9470036-CDS-H-elongata_contig61286:3237..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 3238..3435 +
1691679652.5297296-CDS-H-elongata_contig61286:3237..34351691679652.5297296-CDS-H-elongata_contig61286:3237..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61286 3238..3435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig61286.13677.1

>prot_H-elongata_contig61286.13677.1 ID=prot_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp
RATINSLSRSDSAIELVLHAGDLSYADCQEERWDSFLNMLDPVASRIPWM
VAAGNHEIEADAGSTMGGIFTAYEHRFRMPAAGPAVTGLECGLGGGLDGN
GTACGLGLGDTVALKAATDAANAGLDGEGVAEAVLHAREAIMPYRGPVVT
SGWPETKDDGGAGQAGANQVICTASEWSGTYDFGNSFYSFDVASVHVVVL
NPYTASGEGSLQQSWLIADLGATDRSLTPWIIVMFHCPWYNSNLDHQAER
QALTAMRTMESLLFQHRVALIISGHVHGETFKT*
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mRNA from alignment at H-elongata_contig61286:194..3435+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig61286.13677.1 ID=mRNA_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3242bp|location=Sequence derived from alignment at H-elongata_contig61286:194..3435+ (Himanthalia elongata Himel1 dioecious)
AGGGCGACCATTAATTCACTGTCAAGGTCGGACTCAGCCATCGAACTCGT TCTACACGCTGGCGACCTCTCGTACGCCGACTGCCAAGAGGTACACCTGC CGTTGGGGAGGTCTTCCCGTGATGCCATGCCATATCATCACCCCAACGAT TTTGATCCGCGGCAGCGACGTCCCCGGAGGCAACGGAGCGAAACATTATT TTTCTAGGGTTGCGCTGTATCAGTTTTGTCGTCGCATGCGCAAGTGCTTC GTCCATACTTGCATGAGGGGATCACGGGAACCTTAGGTGGAATCGACAGT TGCAGCGCATTTTCCGTGCCGCCCTGACGTAAGGAGGCTTTGTTTCCTTC CCTCTGCTGGAAGGCTACTGCCCCTTGTCGTTGCCTGATACACACTCTCA ATTTGCTATACCTTTTGTTATACCCTTTGCTATACCCTTTGCTCGTCCAT CACCTTTGCTGATACCGCCGATTGATGGACTATACCCTTTGCCTGCACTA AAAAGCGTTCGGTACGCCGATTGATGAATCCCTCTGTTGATTGCTTGCGT GTCTGTTGCACGCAGGAACGTTGGGACTCATTCCTTAACATGCTAGACCC TGTGGCGTCCCGCATCCCTTGGATGGTCGCAGCCGGTAATCACGAAATAG AGGCAGATGCTGGATCGACCATGGGTGGAATATTCACCGCGTACGAGCAT CGCTTCCGAATGCCCGCAGCCGGCCCCGCAGTAACGGGTCTCGAATGCGG CCTGGGGGGAGGGCTGGACGGTAATGGAACGGCTTGTGGGCTTGGCCTCG GGGACACGGTGGCTCTCAAGGCTGCGACGGACGCCGCAAATGCGGGCTTA GACGGCGAAGGGGTGGCGGAGGCGGTGCTACACGCCCGGGAGGCCATCAT GCCCTACAGGGGGCCGGTCGTTACATCGGGATGGCCCGAGACGAAGGATG ATGGCGGTGCGGGGCAAGCAGGGGCAAATCAAGTGATCTGCACGGCGTCT GAGTGGTCGGGAACCTACGATTTCGGGAACAGGTGGGTCGTGAGCTTCTC GATGATCGGATGTTTGGCACGTAATATTGTCACAAGAGTGGACAAGGATA AAAACAGAGCAACAGAGAGAACAGTGGAACCAGAAACAGTATATTGTACG TCGTCAGGTGGACCGTACGGGCATTTTCGAGGATCTGTTTGAAGCACGGA AAGACCAAATGTGTCGAATATCCGATAGCAACATGGGTTGCCACACGAAG CACCCGATTCCGCCGGCTCCGACTCGCCGCTCCGGTGGACTCGGCCTCCG CTTCCTCTGCTGTGTTTCGCTGCTGATTTTCACTGCCCCAGCTTTTATTC GTTCGATGTGGCCAGCGTTCATGTCGTCGTGCTCAACCCCTACACCGCCA GTGGCGAAGGATCGTTACAGCAATCGTGGCTCATAGCGGTGAGCGGCTTT TGAGCAAGCCTTGGTACTCCTGAGTTCATGTGGCCGTTTGAGATACCGGA CGGTTGAAGGGGCGGGGGGGGGTATGGTGCAGAGGTGGGGCCACATAATG CGGCTGGCTCACCTGTTGAAGGTGCGACGGTAAGCCCTCGGTAATCGTTA ATCGGTAGCGGTGTCCTATCATGTCCTATTCTAGGTCGGTCCTGGCTTGA TGATGGCTAGTTGGAGTCTTGATATTATTCTCGCGCGGAGCGTGAGTTTT AATTTGCATGCGATATTCCCGGTGAACCCCAGCACTGCACCCGTCCGTCA CTCGTCGATTGCTTTTACGGCGAGCGAAGCGAAGCTCCGTTTATGCCGCA TGCGATACACACTGTAAACCCAGCTCTGCACCCGTACGTCACTCGCCGAT TGCTTTTACGGCGAGCGAAGCGAAGCTCCGTTTATGCCGCATGCGATGCA CACTGCAAACCTAGCTCTGCAGCCCGTACGTCACTCGTCGATTGCTTTTA CGGCGAGCTCGAGATTTGCGCGCGTCAAACTGCGCGTTGTATCGCGCATC GCGTGAGGGGGGCTGCTGTAGAAAAAAATGAAGCCATTTTGATAGCGATT AAAGTATTGATTTTGAAGCCTACAAAACTACTTGGTTAAAGTATTGGGTG ACCCTTTTCGGGCGTGGCTAGAGGATTATCGAGTGGGAACAGAACATCAA GGGCGATCAAGCGATTTGACACACAGTCCCGCGGCCTGCATTGTAACAAC AGTCGTACCCGCGCAGCCGGCGGCGAGGTATTGAGCAATGATGTTGAGCC TCTTTTCACTTGAATATAGCATCGAAAAATGGTGTATCAAACTACTTGAT TAAAGAACAGAGTAACCTTTTTTGGGTCGAGAACAAAAAATCCACAGTAG GCCAACACAACAGTCCCGCGGCCTGTCCACTACAACATGATCCGACACAA CAACAGTCCCGTGGCATGCACCGCGACACGATCCGACACAACAGTCCCGC GGCCTACGCCAAAATAGCAGTGGTACTCGCGCACTTAGCAGGCGGGCATG GATCCTGCTGGAAGGAGACCTCTTGGCAGCTTAGACCCCCAATGCTCGAG GAGATCGGCATCCAGCGGCCACGAGGCATGAGTGGACGGATGAAATTGGA TTGAAAAAACTCTCAAAGCAACTACTTGGCTCTCTACACTAAGGTCATCA ATGTTGCTACTGTTGATCGGCAAGGGAAGGCATACGTTGTATCATCAACA AGAAACAAAAAATGATCATGATAAATTTTGTTTTGATGATATGCATGGGC CACCCCCCACCTACCAAACGCCCACAATTTGACGATAGTTACACCAGTAT CCAAAACGCGCGAGTTCTAGCGAGAGCTGAAAATACTTTTTTCATTTCCG AAGCAGGCTTGCGTACACGCACTAAGAGAAGCTATCACGTGCCTTCATCA AGTTAAGACAGAATGAGGCGTGGGTTAGGTTCGAAGGGTGTGGATGATCG TTGACCCAAACGGATGAGAAAAAAACAGCCACTGCAGCTGCAGACACCAA TCTCCCACCTACGACCCGGCTGCTCAACTTCCACTTCTCCGCAGGATCTG GGCGCCACAGATCGCTCGCTGACGCCCTGGATTATAGTAATGTTTCACTG TCCTTGGTACAACTCGAACCTGGACCACCAGGCCGAGCGACAGGCGCTCA CGGCAATGCGCACGATGGAGTCCCTGTTGTTCCAGCACAGGGTGGCCTTG ATTATATCTGGGCACGTTCACGGTGAGACTTTTAAGACCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig61286:194..3435+

>mRNA_H-elongata_contig61286.13677.1 ID=mRNA_H-elongata_contig61286.13677.1|Name=mRNA_H-elongata_contig61286.13677.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1704bp|location=Sequence derived from alignment at H-elongata_contig61286:194..3435+ (Himanthalia elongata Himel1 dioecious)
AGGGCGACCATTAATTCACTGTCAAGGTCGGACTCAGCCATCGAACTCGT
TCTACACGCTGGCGACCTCTCGTACGCCGACTGCCAAGAGAGGGCGACCA
TTAATTCACTGTCAAGGTCGGACTCAGCCATCGAACTCGTTCTACACGCT
GGCGACCTCTCGTACGCCGACTGCCAAGAGGAACGTTGGGACTCATTCCT
TAACATGCTAGACCCTGTGGCGTCCCGCATCCCTTGGATGGTCGCAGCCG
GTAATCACGAAATAGAGGCAGATGCTGGATCGACCATGGGTGGAATATTC
ACCGCGTACGAGCATCGCTTCCGAATGCCCGCAGCCGGCCCCGCAGTAAC
GGGTCTCGAATGCGGCCTGGGGGGAGGGCTGGACGGTAATGGAACGGCTT
GTGGGCTTGGCCTCGGGGACACGGTGGCTCTCAAGGCTGCGACGGACGCC
GCAAATGCGGGCTTAGACGGCGAAGGGGTGGCGGAGGCGGTGCTACACGC
CCGGGAGGCCATCATGCCCTACAGGGGGCCGGTCGTTACATCGGGATGGC
CCGAGACGAAGGATGATGGCGGTGCGGGGCAAGCAGGGGCAAATCAAGTG
ATCTGCACGGCGTCTGAGTGGTCGGGAACCTACGATTTCGGGAACAGGAA
CGTTGGGACTCATTCCTTAACATGCTAGACCCTGTGGCGTCCCGCATCCC
TTGGATGGTCGCAGCCGGTAATCACGAAATAGAGGCAGATGCTGGATCGA
CCATGGGTGGAATATTCACCGCGTACGAGCATCGCTTCCGAATGCCCGCA
GCCGGCCCCGCAGTAACGGGTCTCGAATGCGGCCTGGGGGGAGGGCTGGA
CGGTAATGGAACGGCTTGTGGGCTTGGCCTCGGGGACACGGTGGCTCTCA
AGGCTGCGACGGACGCCGCAAATGCGGGCTTAGACGGCGAAGGGGTGGCG
GAGGCGGTGCTACACGCCCGGGAGGCCATCATGCCCTACAGGGGGCCGGT
CGTTACATCGGGATGGCCCGAGACGAAGGATGATGGCGGTGCGGGGCAAG
CAGGGGCAAATCAAGTGATCTGCACGGCGTCTGAGTGGTCGGGAACCTAC
GATTTCGGGAACAGCTTTTATTCGTTCGATGTGGCCAGCGTTCATGTCGT
CGTGCTCAACCCCTACACCGCCAGTGGCGAAGGATCGTTACAGCAATCGT
GGCTCATAGCGCTTTTATTCGTTCGATGTGGCCAGCGTTCATGTCGTCGT
GCTCAACCCCTACACCGCCAGTGGCGAAGGATCGTTACAGCAATCGTGGC
TCATAGCGGATCTGGGCGCCACAGATCGCTCGCTGACGCCCTGGATTATA
GTAATGTTTCACTGTCCTTGGTACAACTCGAACCTGGACCACCAGGCCGA
GCGACAGGCGCTCACGGCAATGCGCACGATGGAGTCCCTGTTGTTCCAGC
ACAGGGTGGCCTTGATTATATCTGGGCACGTTCACGGTGAGACTTTTAAG
ACCTGAGATCTGGGCGCCACAGATCGCTCGCTGACGCCCTGGATTATAGT
AATGTTTCACTGTCCTTGGTACAACTCGAACCTGGACCACCAGGCCGAGC
GACAGGCGCTCACGGCAATGCGCACGATGGAGTCCCTGTTGTTCCAGCAC
AGGGTGGCCTTGATTATATCTGGGCACGTTCACGGTGAGACTTTTAAGAC
CTGA
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