mRNA_H-elongata_contig61147.13661.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig61147.13661.1
Unique NamemRNA_H-elongata_contig61147.13661.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 8.510e-78
Identity = 167/417 (40.05%), Postives = 229/417 (54.92%), Query Frame = 3
Query:  540 LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYD---GYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQ--PAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRYGPRD----------AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWP-------SDGKEFGVIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            +GM ++  + +    E  +L   +++WCPG P  LEL YR SRDG+N   F+ +C  + PST+TLL V    +G   S+IGGFSSV W P   +   GY       + + SPGAF+F++K   +  +G     P  W +  G A   V +     GP FG    +V +N       +  +  +V  G+   FL+L  + + ++E +RV   P            A  G +  T      ++   FG  IA  LME  + L +A  EL LAK    A A AL +VYGP +ASG+ + VVEL V GT MTTLRSTLR CP+SALAARFD+ KWP       SDG+   +IDC PA+F+KVLDVLR+ KRA W+  + +  +K +RV I  GDR + EEFVDMYF GC+ F+M  V   G
Sbjct:  175 VGMSIQGGTTIFEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGY-------YLRGSPGAFVFILK---DEGKGSSTFPPMKWGVKNGLAAKAVNQ---GCGPCFGECDLKVNWNGNMSTVGTDNSTYDVPAGSH--FLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAGEGTNTPTAPVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRR--MIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFIMAHVCLPG 574          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 7.260e-76
Identity = 182/447 (40.72%), Postives = 241/447 (53.91%), Query Frame = 3
Query:  474 LSVDQRPYLLNIARVLRLDT--PFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGG---CQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFN--VPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVR---------------YGPRD---AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            L++D+  YL  +AR L L    P  GMEV   +  LS  E+ EL   ++ WCPG+P  + L YR SRDG++   FH  C +  P+TITLL V     G+  S++GGFSSV W P AY G DS         S GAFIFM+K   +++ GG    QP  W          V+      GP FG     V FN   P   +   ++ +  S  T   F  L  + + E+EV++V                 GP D   A S  S  T  +   ++   FG +IAG LMEER+AL  AE EL  A +   A+  AL +VYGP +A G  D+VVEL V GTRMTTLRSTL+AC ESALAA F++ KWP   K+       +I+CSPA+F KVLDVLR+RKRA W+   R    + + V +   DR + + FV+MYFPG ++F+ D V  QG
Sbjct:  127 LALDEMVYLPYVARALGLSAYIPRQGMEVVGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRV-----GASQSIVGGFSSVPWSPHAYGG-DSI------MSSLGAFIFMLK---DSDMGGPNSFQPVKWGKRDNNGGCDVVV-GASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGST---FPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDR----ELAHVRVDAADRPAFDSFVNMYFPGFENFITDMVVPQG 550          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.020e-74
Identity = 176/441 (39.91%), Postives = 237/441 (53.74%), Query Frame = 3
Query:  483 DQRPYLLNIARVLRLDTPFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSW--VPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLP-RGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRY-------------GPRD-AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTR----MTTLRSTLRACPESALAARFDDSKWPSDGKEFG------VIDCSPAIFAKVLDVLRLRKRAEWSKQ--KRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSF 1718
            D++PY+  +A  L LD   LGM V   S  L   E E L   I  WCPG P+ LEL YR SRDG++ +  H +C D+ PSTI+L  V    + +  S++GGFSSV W  +P    G DS             F+F++K G+E E    QPA W L  R P   P   +D +      G G     +V   N+  +   +  +      F+ L  + + ++EV+RVR              G  D AA  ++     +   N+   FG SIAG L +ER AL  A+ EL+ A T   A+  AL +VYGP+ A+G  D +VEL V G+R    MTTL STL+ACPESALAARFD++KWP   K+        + DCSP++F+KVLDVLR++KR  W+    K  A V    V I + DRA  EEFV+MYFPGC+ F+MD V F
Sbjct:  114 DEKPYIGGVASALGLD---LGMTVPGGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTALPPENRGLDS-------------FLFILKDGIE-ESHNFQPAIWGLRIRNPK--PSGAYDMEKFGLIFGRGRIFDLSVVWTNQTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQTMGTLPTTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGAAVL---VAIKDADRAPFEEFVNMYFPGCESFIMDSVKF 532          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 7.690e-73
Identity = 172/428 (40.19%), Postives = 235/428 (54.91%), Query Frame = 3
Query:  474 LSVDQRPYLLNIARVLRLDT--PFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGG---CQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFN-VPCKNECSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVRYGPRDAASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            L+ D+  YL ++AR L L    P  GMEV   + +LS  E+ EL   ++ WCPG+P  ++L YR SRD ++   FH  C +  P+TITLL V     G+ +S++GGFSSV W P AY G DS         S GAFIFM+K   +++ GG    QP  WS       + V+      GP FG     V F  VP   +   ++ +  S   +  F  L  + + E+EV++V                    + N      +IAG LMEER+AL  AE EL  A +    +  AL +VYGP +A G  D+VVEL V GTRMTTLRSTLRAC ESALAA F++ KWP+  K+       +I+CSPA+F KVLDVLR+RKRA W+   R +    + V +   DR + + FV+M+FPG ++F+ D V  QG
Sbjct:  149 LAPDEMAYLPHVARALGLSAYIPLQGMEVVGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRV-----GASASIVGGFSSVPWSPHAYGG-DSV------MSSLGAFIFMLK---DSDMGGPNSFQPVKWSKRDNNGGYDVVV-GASRGPFFGRTDLVVNFTYVPVTLQAQPYSYDVPS---VPAFPNLNGQTITEIEVFQV-------------------NICN------AIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRES----AHVRVDAADRPAFDSFVNMFFPGFENFITDMVVPQG 528          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 3.020e-64
Identity = 164/451 (36.36%), Postives = 225/451 (49.89%), Query Frame = 3
Query:  459 THPVPLSVDQRPYLLN-IARVLRLDTPF--LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEI-PSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGG-GCRVTFNVPCKNECSIFAGENVSEG-TMTPFLELQRKRVFEMEVYRVRYGPRD------------AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSK---------QKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVS 1715
            T    +S D +P L +  ARVL L      +GM +K  +      E  +L   ++ WCPG+P                     +C D+  P+TIT L V    + +   +IGGFSS+ W    YD      +  +   SPGAF+FM+K G     G  Q   W +  G + + V R     GP FG G    V +N     E ++  G       T +PF EL   R+ ++E +RV  GP+             A   K+G        ++   FG  +A  LMEE   L  A +EL LAK    A A A+ +VYGP +A+G  D VVEL+V GTRMTTLRSTLR CP+SALAA F++ +WP   K+       +IDC P++F+KVLDVLR+ KRA W++         ++RV      RV I  GD A+ EEFVDMYFP C+ F+M+ V 
Sbjct:   99 TGEADMSRDDQPDLFHHTARVLGLSGQLAPVGMTIKGGTTTFDPHEASKLTAVVQRWCPGNP---------------GAACQDRCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYD-----SDAGYYSPSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQ-GYGPCFGEGRDLHVVWN---GTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRV--GPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKP----RVTIKAGDCAAFEEFVDMYFPCCETFMMEHVD 519          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.350e-57
Identity = 152/379 (40.11%), Postives = 203/379 (53.56%), Query Frame = 3
Query:  657 RGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNE-----CSIFAGENVSEGTMTPFLELQRKRVFEMEVYRVR------YGPRD-AASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTR----MTTLRSTLRACPESALAARFDDSKWPSDGKEFG------VIDCSPAIFAKVLDVLRLRKRAEWS---KQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSF 1718
            R SRD ++ + FH +C D+ PSTI+L  V+   + +  SV+G FS V W         ++ E++    SPG+F+FM+K G E  +   QP+ W  P+      V+   T+   D+          V C +      C I+        T  PFL    + V ++EV+RV        G  D AA  K      +   N+   FG SIAG L +ER AL  A+ EL+ A T   A+  AL +VYGP IA+G  D VVEL V G R    MTTL STL+ACPESALAARFD++KWP   KE        + DCSP +FAKVLDVLR++KR  W+   K+ R A +    V I   DRA  E+FV+MYFP C+ F+MD V F
Sbjct:  175 RASRDSWSDHAFHARCGDDSPSTISLFCVEAQGANNSDSVVGRFSVVPWT--------ASPEFSPVLPSPGSFLFMLKDGNEGSDA-VQPSKWG-PKVGYTGQVVDGRTEGPVDW----------VMCLHRMFTVHCGIY-----DIPTEHPFLYHMGREVVDIEVFRVLPTSLTVTGLIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRAAVL----VAIKAADRAPFEKFVNMYFPACESFIMDSVKF 524          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 2.450e-53
Identity = 156/447 (34.90%), Postives = 219/447 (48.99%), Query Frame = 3
Query:  474 LSVDQRPYLLNIARVLRLDTPFL--GMEVKSK-SAVLSTS-ELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYS--GSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCK------NECSIFAGENVSEGTMTP-----------FLELQRKRVFEMEVYRVRYGPRDAASGKSGGTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCG----TRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG---VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            L  D++ YL  ++  L + +P       V S+ SA+L    EL+ L   + +WCPG+P+ L+L YR SRDG++   FH +C D+ P T+TL  ++   +  G   SV+G FSSV W P + DGY         K SPG F+F++  G  +            P    VHP        G    G G   +F+V  +         S  +G N      T            FL+     V E+EVYRV              +  + + ++   FG SIA    EE  AL  A+ +L+ A     A+A AL +VYGP +AS   D VV+  V G    TR+TTLRSTL+ CP   L AR D SKW  +  + G   + DCSPA+F+KVLDVLR++KRA W     +     + VV+   DR + E+ V MYFPGC+  ++D V F G
Sbjct:  102 LPTDEQAYLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLNDASNRKGLNCSVLGCFSSVPWTPPS-DGYTKL------KSSPGGFVFILTDGSRSFR----------PTKLKVHPHYA-KRGCGLVVLGEGSMPSFHVDLEVFHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRV-------------WSAEEERSDDIHRFGGSIAASFEEEHKALHKAQSKLVEATEKGAASASALAAVYGPGVASNSRDPVVDFSVRGSRTTTRITTLRSTLQLCPY--LVARLDQSKWTENKDKHGRWLIKDCSPAVFSKVLDVLRMKKRAGW-----IGGEVKAHVVVKATDREAFEQAVGMYFPGCERVILDHVEFLG 510          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.020e-48
Identity = 160/477 (33.54%), Postives = 229/477 (48.01%), Query Frame = 3
Query:  474 LSVDQRPYLLNIARVLRLDTPF------LGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAH-WSLPRGP---AVHPVIRWDTDVGPDFGGGGCRVTFNVP----CKNECSIFAG-ENVSEGTMTPFLELQRKRVFEMEVYRV----RYGPRDAA-------SGKSGGTKRKWKVNNTGL-----------FGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPD--SVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWP----SDGK--EFGV-----------IDCSPAIFAKVLDVLRLRKRAEW-SKQKRVATVKFS------RVVITEGDRASLEEFVDMYFPGCKDFVMDWVS 1715
            ++  + PYLL I+ VL L           GM V   +   +  +L +    +R+WCPGDP  L L YR SRDGF+   F  +C   +  TITL+ V     G   SV+GGFS +  VP        N        S  AF+F+    L++  GG   A  WS+  G    A+H     D   GP FG     VTF+        + C++  G E       +PF+ L  K V E+E++RV    R   +D A              KRK  ++               FG+S+A +LMEE++AL+ A+ EL  AK    A A AL  VYGP +AS + +  +VVEL V G  +TTLRSTL ACP+SA +     +  P     DG+  + G+           +DC P+ F+K+LDV+R+RKRA W +  ++ A ++ +      R+ + E DRA  +  V   FP C+DFVMD + 
Sbjct:  158 VAAHEEPYLLYISHVLGLSNVIPACPNTKGMVVAGGTTTANPLQLPQWSSLLRSWCPGDPAGLHLLYRASRDGFSTGPFQ-QCVRGVCETITLIRVKSD-DGRPDSVVGGFSDIEIVPQEVGMETGNQR------SSSAFLFL----LDSPGGGFPTAKKWSIKEGEDSCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQFGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMDMIE 622          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 4.010e-41
Identity = 139/443 (31.38%), Postives = 196/443 (44.24%), Query Frame = 3
Query:  474 LSVDQRPYLLNI-ARVLRL---DTPFLGMEVKSKSAVLSTSELEELWLYIRNWCPGDPQDLELSYRGSRDGFNANGFHTKCTDEIPSTITLLTVDPGYSGSRSSVIGGFSSVSWVPTAYDGYDSNDEWNFDKDSPGAFIFMVKGGLETEEGGCQPAHWSLPRGPAVHPVIRWDTDVGPDFGGGGCRVTFNVPCKNECSIFAGENVSEGTMTP--FLELQRKRVFEMEVYRVRY-GPRDAASGKSG------------GTKRKWKVNNTGLFGASIAGVLMEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDS-VVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSK-QKRVATVKFSRVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            L+ D +P LL   ARVL L     PF  M ++    +L   E + L   ++ WCPG P  LEL YR SRDG++A  F  KC D  PSTI+L                           + G++S            A +F +                          ++ +     P  G    RV + V      S    +N+++        L L  + V ++E +R+ Y  P DA S                   R   +  +  FG  IA  LMEE + L  A +EL +A+    A A AL  VYGP +A G+ +  VVEL VCGTR+T + STLR CP S  A +F + +WP+  K+       VIDC P++F+KV+D+LR    A W++        K  RV I   DRA  EEFVD+YF GC+  +M++V   G
Sbjct:   90 LAPDDKPELLYYTARVLGLRGQSAPF-DMPMRGGPNILEPHETKRLTAIVQGWCPGHPGGLELLYRASRDGWSARSFDDKCRDGSPSTISL--------------------------PFSGFESR-----------ADLFTIS------------------------TIVLFS--AAPGNGMCDLRVVWKV---GAASTVQTKNLTQDVQAESRLLALNGRGVVDIETFRLCYCRPTDALSSAKPKHHFIGDIAVPTAPVRSRLLRMSFPFGRLIADALMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYVESLG 460          
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 8.460e-41
Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 3
Query: 1254 MEERVALSNAEDELLLAKTNVQAAACALTSVYGPYIASGKPDSVVELHVCGTRMTTLRSTLRACPESALAARFDDSKWPSDGKEFG-----VIDCSPAIFAKVLDVLRLRKRAEWSKQKRVATVKFS-RVVITEGDRASLEEFVDMYFPGCKDFVMDWVSFQG 1724
            ME  + L  A  EL  AK    A A AL +VYGP +A+G+ + VVEL V GT M TLRSTLR CP SALAARFD+ KWP+  K+       VIDC P++F+KVLDVLR+ KR  W+  +++  +  + RV I  GDR + EEFVDMYF GC+ F+M+ VS  G
Sbjct:    1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKGCESFIMEHVSLLG 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61147.13661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAP0_9PHAE8.510e-7840.05TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G2H5_ECTSI7.260e-7640.72TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIV0_ECTSI1.020e-7439.91TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L232_9PHAE7.690e-7340.19TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIX7_ECTSI3.020e-6436.36BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JCR8_9PHAE7.350e-5740.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR77_ECTSI2.450e-5334.90TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G141_ECTSI7.020e-4833.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JD55_9PHAE4.010e-4131.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIX8_ECTSI8.460e-4151.53BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61147contigH-elongata_contig61147:439..2187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1724
Cds size522
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61147.13661.1prot_H-elongata_contig61147.13661.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig61147 439..960 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930986.8236978-CDS-H-elongata_contig61147:438..9601622930986.8236978-CDS-H-elongata_contig61147:438..960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61147 439..960 +
1691679651.762226-CDS-H-elongata_contig61147:438..9601691679651.762226-CDS-H-elongata_contig61147:438..960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61147 439..960 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930986.842142-UTR-H-elongata_contig61147:960..16411622930986.842142-UTR-H-elongata_contig61147:960..1641Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig61147 961..1641 +
1691679651.7707422-UTR-H-elongata_contig61147:960..16411691679651.7707422-UTR-H-elongata_contig61147:960..1641Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig61147 961..1641 +
1622930986.8650627-UTR-H-elongata_contig61147:1666..21871622930986.8650627-UTR-H-elongata_contig61147:1666..2187Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig61147 1667..2187 +
1691679651.7845378-UTR-H-elongata_contig61147:1666..21871691679651.7845378-UTR-H-elongata_contig61147:1666..2187Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig61147 1667..2187 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig61147.13661.1

>prot_H-elongata_contig61147.13661.1 ID=prot_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
MSRRSINEKAVFTVSTDACSKELQAALSNWRAYLDRAWDTLDDGWKELEK
KMVTIGITKPVGVDGALVHLNVGGLHLNVRRAVIESMCHKPVNDWALGNL
FDVVWDSRVPRDGDGRIFLDESLVILKHLVHTKSWRRPSRLIIKKTSFCG
ISLLIPSLSLLTNALTSSTSPGS*
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mRNA from alignment at H-elongata_contig61147:439..2187+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig61147.13661.1 ID=mRNA_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1749bp|location=Sequence derived from alignment at H-elongata_contig61147:439..2187+ (Himanthalia elongata Himel1 dioecious)
ATGAGCCGTAGATCAATTAATGAGAAGGCCGTTTTCACGGTCAGTACTGA TGCCTGCTCGAAAGAGCTACAGGCGGCGCTGAGCAATTGGAGAGCATATT TGGATCGCGCGTGGGACACCTTGGACGATGGGTGGAAGGAACTCGAGAAG AAGATGGTCACCATCGGTATCACCAAGCCAGTGGGCGTGGATGGTGCCTT GGTCCACCTGAACGTTGGGGGGCTACACTTGAACGTTCGCCGGGCTGTCA TCGAATCGATGTGCCATAAACCCGTTAATGACTGGGCATTGGGAAATCTG TTCGATGTCGTGTGGGATTCACGCGTCCCGAGAGACGGGGACGGGAGAAT TTTCCTAGACGAGTCCCTGGTTATCTTGAAGCATCTTGTGCATACTAAAA GCTGGAGGCGTCCATCACGACTCATAATTAAAAAAACGTCATTTTGCGGG ATATCATTACTCATCCCGTCCCTCTCTCTGTTGACCAACGCCCTTACCTC CTCAACATCGCCAGGGTCCTGAGGTTGGACACCCCATTCCTTGGAATGGA GGTGAAGAGTAAGAGTGCCGTGTTGAGCACTAGTGAGCTCGAGGAGCTTT GGCTTTATATACGAAATTGGTGCCCAGGTGACCCACAAGATCTGGAGTTG AGCTACAGAGGATCTCGGGATGGGTTCAACGCTAACGGGTTCCACACCAA GTGTACAGACGAGATTCCCTCCACTATAACTCTTTTGACGGTAGATCCCG GTTACTCTGGCAGCAGGAGCAGCGTCATTGGGGGCTTCTCCAGTGTATCA TGGGTCCCGACGGCGTATGATGGATATGACTCCAACGATGAATGGAACTT CGACAAAGATTCTCCTGGGGCGTTTATCTTCATGGTAAAAGGGGGATTGG AAACAGAAGAAGGGGGATGCCAACCTGCCCATTGGAGCCTTCCTCGAGGC CCCGCAGTCCACCCCGTGATAAGATGGGATACCGATGTGGGACCTGATTT TGGTGGTGGCGGATGCAGGGTGACTTTCAACGTGCCTTGTAAAAATGAAT GTTCGATTTTCGCCGGCGAAAATGTCTCAGAAGGCACGATGACACCTTTT TTGGAACTACAACGGAAGCGCGTCTTTGAGATGGAGGTCTACCGCGTTCG TTATGGCCCACGAGATGCCGCCAGTGGCAAGTCCGGTGGGACCAAAAGAA AATGTTATGCCGATTCGGTATTATAGAGGGAAGGTCAACAATACTGGCCT ATTCGGCGCCTCGATCGCTGGTGTGCTCATGGAGGAACGGGTGGCCCTTT CCAATGCCGAAGATGAGCTACTGCTCGCGAAAACAAATGTCCAAGCGGCC GCTTGCGCCTTGACGTCCGTGTACGGCCCATATATCGCGTCTGGAAAACC CGATTCTGTTGTGGAGCTTCACGTTTGCGGGACGAGAATGACCACATTAC GTTCTACGCTACGGGCTTGCCCGGAGTCCGCGCTAGCCGCAAGGTTCGAC GACAGCAAGTGGCCATCCGATGGGAAGGAGTTTGGGGTGATCGACTGCAG CCCGGCAATCTTCGCCAAGGTATTGGACGTGCTACGCTTGAGAAAGCGCG CCGAATGGTCTAAGCAGAAGAGGGTCGCCACAGTAAAGTTTTCTCGTGTG GTGATCACCGAGGGCGATCGCGCTTCCTTGGAGGAGTTCGTGGATATGTA TTTTCCAGGCTGCAAGGACTTCGTGATGGACTGGGTGTCGTTCCAGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig61147:439..2187+

>mRNA_H-elongata_contig61147.13661.1 ID=mRNA_H-elongata_contig61147.13661.1|Name=mRNA_H-elongata_contig61147.13661.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at H-elongata_contig61147:439..2187+ (Himanthalia elongata Himel1 dioecious)
ATGAGCCGTAGATCAATTAATGAGAAGGCCGTTTTCACGGTCAGTACTGA
TGCCTGCTCGAAAGAGCTACAGGCGGCGCTGAGCAATTGGAGAGCATATT
TGGATCGCGCGTGGGACACCTTGGACGATGGGTGGAAGGAACTCGAGAAG
AAGATGGTCACCATCGGTATCACCAAGCCAGTGGGCGTGGATGGTGCCTT
GGTCCACCTGAACGTTGGGGGGCTACACTTGAACGTTCGCCGGGCTGTCA
TCGAATCGATGTGCCATAAACCCGTTAATGACTGGGCATTGGGAAATCTG
TTCGATGTCGTGTGGGATTCACGCGTCCCGAGAGACGGGGACGGGAGAAT
TTTCCTAGACGAGTCCCTGGTTATCTTGAAGCATCTTGTGCATACTAAAA
GCTGGAGGCGTCCATCACGACTCATAATTAAAAAAACGTCATTTTGCGGG
ATATCATTACTCATCCCGTCCCTCTCTCTGTTGACCAACGCCCTTACCTC
CTCAACATCGCCAGGGTCCTGAATGAGCCGTAGATCAATTAATGAGAAGG
CCGTTTTCACGGTCAGTACTGATGCCTGCTCGAAAGAGCTACAGGCGGCG
CTGAGCAATTGGAGAGCATATTTGGATCGCGCGTGGGACACCTTGGACGA
TGGGTGGAAGGAACTCGAGAAGAAGATGGTCACCATCGGTATCACCAAGC
CAGTGGGCGTGGATGGTGCCTTGGTCCACCTGAACGTTGGGGGGCTACAC
TTGAACGTTCGCCGGGCTGTCATCGAATCGATGTGCCATAAACCCGTTAA
TGACTGGGCATTGGGAAATCTGTTCGATGTCGTGTGGGATTCACGCGTCC
CGAGAGACGGGGACGGGAGAATTTTCCTAGACGAGTCCCTGGTTATCTTG
AAGCATCTTGTGCATACTAAAAGCTGGAGGCGTCCATCACGACTCATAAT
TAAAAAAACGTCATTTTGCGGGATATCATTACTCATCCCGTCCCTCTCTC
TGTTGACCAACGCCCTTACCTCCTCAACATCGCCAGGGTCCTGA
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