mRNA_H-elongata_contig61022.13649.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.890e-31 Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
WKR+E SYPLLAR ARVVF APAS V ERD AGRMMTSSRS+ DAK V+MVLFLHGN+DL+P I +LPADGVNG Q+KIPGRL
Sbjct: 653 WKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRL 739
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 109 bits (273), Expect = 4.120e-29 Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDI 204
WKR SSYPLLARAARVVFGAPAS+AVLE DF DAGR+MTSSRS+TDAK V+M+LFLHGNLDLIP DI
Sbjct: 41 WKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDI 108
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 113 bits (282), Expect = 2.920e-27 Identity = 61/87 (70.11%), Postives = 71/87 (81.61%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
WK +YPLLAR ARVVFGAPAS+AVLERDFS+AGRMMTSSRS+ D+K V+M++FLHGNLDLIP DI KL A++KIPGRL
Sbjct: 611 WKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAA---ARTKIPGRL 694
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.910e-26 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 22 YPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKN-VDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
YPLLAR ARVVFGAPAS+AVLERDFS+AGRMMTSSR + D+ V+M+LFLHGNLDLIP DI KL + V A+SKIPGRL
Sbjct: 6 YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEAV--ARSKIPGRL 83
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 106 bits (265), Expect = 5.720e-25 Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
WK+ YPLLARAARVVFGAPAS+AVLERDF+DA MM SSRS+ DAK V+MVLFLHGNLDLIP I +L + V Q+KIPGRL
Sbjct: 551 WKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDV---QAKIPGRL 634
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 105 bits (262), Expect = 9.770e-25 Identity = 60/87 (68.97%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
WK +YPLLAR ARVV GA AS+AVLE DFS+AGRMMTSSRS+ D+K V+M+LFLHGNLDLIP DI KL + V A++KIPGRL
Sbjct: 384 WKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRL 467
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 9.010e-23 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
WK +YPLLAR ARVVFGAPAS+AVLE FS+AGRM TSSRS+ D+ V+M++FLHGNL+LIP DI KL + V A++K PGRL
Sbjct: 147 WKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKL-TEVV--ARTKFPGRL 230
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.800e-21 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 19 SYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKN-VDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
+Y LL ARVVFGAPAS+A LERDFS+AGRMMTSSRS+ D+K V+M+LFLHGNLDLIP DI L + V A++ PGRL
Sbjct: 5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEAV--ARTMFPGRL 83
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 9.590e-16 Identity = 47/88 (53.41%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSK-IPGRL 261
WKR SSYPLLARA RVVFGAPAS+A +E M+LFLHGNLDLIP DI LP DG + A +K +PGRL
Sbjct: 41 WKRWMSSYPLLARATRVVFGAPASAAYVE-----------------------MILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRL 105
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 9.820e-14 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 13 ESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 261
++ YP +ARAARV+ PASSAVLERDFS AGR++T +RS A V+MVLFL+GN + IP ++ KL Q +P RL
Sbjct: 721 QALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQ---GQEAVPRRL 800 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61022.13649.1 >prot_H-elongata_contig61022.13649.1 ID=prot_H-elongata_contig61022.13649.1|Name=mRNA_H-elongata_contig61022.13649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNback to top mRNA from alignment at H-elongata_contig61022:1696..1956- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61022.13649.1 ID=mRNA_H-elongata_contig61022.13649.1|Name=mRNA_H-elongata_contig61022.13649.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=261bp|location=Sequence derived from alignment at H-elongata_contig61022:1696..1956- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61022:1696..1956- >mRNA_H-elongata_contig61022.13649.1 ID=mRNA_H-elongata_contig61022.13649.1|Name=mRNA_H-elongata_contig61022.13649.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig61022:1696..1956- (Himanthalia elongata Himel1 dioecious)back to top |