prot_H-elongata_contig6101.13644.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6101.13644.1
Unique Nameprot_H-elongata_contig6101.13644.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 6.530e-43
Identity = 77/150 (51.33%), Postives = 100/150 (66.67%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+GQ +LG MS RGKQAV GR         Q ++GGL++ILVGDPA LPPVGA+ +W   P+  G +++G + WL +N AVELT+V RQQG +QA FR  L  +AEG    DDW++L+    +   A    TFDDAVH+FPTN+ AD WN
Sbjct:   73 MVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 222          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.410e-40
Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+GQ +LG MS RGKQAV GR         Q ++GGL++ILVGDPAQLPPVGA  +W   P+  G +++G + WL +N AVELT+V RQQG +QA FR  L  +AEG    DDW++L+    +   A    TFDDAVH+FPTN+ AD WN
Sbjct:   49 MVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 198          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 5.890e-40
Identity = 78/150 (52.00%), Postives = 101/150 (67.33%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+GQ +LG MS RGKQAV GR         Q ++GGL++ILVGDPAQLPPVGA+ +W   P+  G +++G + WL +N AVELT+V RQQG +QA FR  L  +AEG    DDW++L+    +   A    TFDDAVH+FPTN+ AD WN
Sbjct:  453 MVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 602          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 6.060e-40
Identity = 78/150 (52.00%), Postives = 101/150 (67.33%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+GQ +LG MS RGKQAV GR         Q ++GGL++ILVGDPAQLPPVGA+ +W   P+  G +++G + WL +N AVELT+V RQQG +QA FR  L  +AEG    DDW++L+    +   A    TFDDAVH+FPTN+ AD WN
Sbjct: 1194 MVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 1343          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 5.470e-31
Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDA 134
            M+GQ +LG +S RGKQAV GR         Q ++GGL++ILVGDPAQLPPVGA+ +W   P+  G +++G + WL +N AVELT V RQQG +QA FR  L  +AEG    DDW++L+    +   A    TFDDA
Sbjct:  571 MVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.190e-30
Identity = 70/150 (46.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGRPCALSTLQ--GLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            MIGQ +LG MS+R KQAV GR       +  GL+GGL +I+VGD  QL  V  + +W+S P     + +G   WLG+NAAV+LT+V RQQG  QA FR  L  +AEG     DW  L+    +   A    +FD+AVH+FPTN  AD WN
Sbjct: 1263 MIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWN 1412          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 7.590e-21
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGR--PCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQG 89
            M+GQ +LG MS RGKQAV GR         Q ++GGL++ILVGDPAQLPPVGA+ +W   P+  G +++G + WL +N AVELT+V RQQG
Sbjct:  882 MVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQG 972          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: A0A2H3FRQ0_FUSOX (ATP-dependent DNA helicase n=2 Tax=Fusarium TaxID=5506 RepID=A0A2H3FRQ0_FUSOX)

HSP 1 Score: 85.1 bits (209), Expect = 1.940e-16
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGRPCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+G   L ++  R +Q   GR          +GG+N+ILVGD  QLPPV    ++   P  D H V G   +   N  V L +V+RQQGDDQAGFR  L+ V    +  + W+LL   +R         TFD A+ ++   ++ D +N
Sbjct:  226 MLGLRQLSWIDKRLRQVFPGRATEF------FGGMNIILVGDFFQLPPVANKPLYFDGPLKDLHEVSGQTAYRAFNHTVFLKKVQRQQGDDQAGFRLALSEVRGLKLSIESWKLLSQRVRVKLSQREVDTFDAALRIYSKKARVDEYN 367          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: UPI00109BC70A (uncharacterized protein LOC110236158 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BC70A)

HSP 1 Score: 79.3 bits (194), Expect = 2.250e-14
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0
Query:    1 MIGQALLGFMSIRGKQAVRGRPCALSTLQGLYGGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLG---LNAAVELTEVRRQQGDD--QAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            M+GQ   G++  R +QA  G+       + L+GG ++IL+GDPAQLPPV    ++ S P+    T  G +G+L     N+ + LT+ +R QG D  Q  FR +L H+  GC+   DW +L    R  T  T    F D   LF +N +   +N
Sbjct: 1387 MLGQTTFGWIDRRCRQA-SGKN------EQLFGGKSIILIGDPAQLPPVADKPLYHSVPS----TAIGEQGYLAYRMFNSVILLTDNQRVQGSDSEQRIFRDLLKHIRNGCISTSDWNVLLT--RQPTSITNLDEFKDVTRLFYSNEEVGKYN 1526          
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Match: UPI001EEA0166 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEA0166)

HSP 1 Score: 77.0 bits (188), Expect = 1.290e-13
Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   33 GGLNLILVGDPAQLPPVGAAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQ---GD-DQAGFRRVLAHVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN 148
            GGL +ILVGDPAQLPPV A +++S + A   +  EG   +L   + ++LTEVRRQQ   GD DQ  F   L  + EG    D W+ LQ +     IA     F+DA +LF TN   +  N
Sbjct:  267 GGLTVILVGDPAQLPPVAAPSLYSQSTAPFAN--EGRAAYLAFQSVIKLTEVRRQQVEDGDIDQQTFLDTLNSLREGNCSIDQWKFLQ-ARNPEAIANFGTDFEDATYLFATNEAVNRRN 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6101.13644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDM0_9PHAE6.530e-4351.33ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KDL6_9PHAE1.410e-4052.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE5.890e-4052.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE6.060e-4052.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KA18_9PHAE5.470e-3149.26ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE1.190e-3046.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIQ7_9PHAE7.590e-2154.95ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A2H3FRQ0_FUSOX1.940e-1635.14ATP-dependent DNA helicase n=2 Tax=Fusarium TaxID=... [more]
UPI00109BC70A2.250e-1435.29uncharacterized protein LOC110236158 n=1 Tax=Exaip... [more]
UPI001EEA01661.290e-1342.50ATP-dependent DNA helicase PIF1-like n=1 Tax=Daphn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 16..99
e-value: 8.7E-7
score: 30.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6101contigH-elongata_contig6101:5742..6185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6101.13644.1mRNA_H-elongata_contig6101.13644.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6101 5321..6185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6101.13644.1 ID=prot_H-elongata_contig6101.13644.1|Name=mRNA_H-elongata_contig6101.13644.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MIGQALLGFMSIRGKQAVRGRPCALSTLQGLYGGLNLILVGDPAQLPPVG
AAAIWSSAPAGDGHTVEGYRGWLGLNAAVELTEVRRQQGDDQAGFRRVLA
HVAEGCVMPDDWELLQVSMRSNTIATTAATFDDAVHLFPTNSKADAWN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase