mRNA_H-elongata_contig61.13640.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 541 bits (1393), Expect = 2.310e-172 Identity = 297/618 (48.06%), Postives = 404/618 (65.37%), Query Frame = 1
Query: 160 GGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVSFRNSSFFCGSGEYGFD---DIDEGAETCRIEVVCSRCNIECNKVPGNISL-DEGTLPICEVVPKGVNRT-KAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGGSNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALLSVFTVFREAHVIEVPIPVRDVSQPTRSVQ--SLDQDHDNQHCSSSS 1992
GGA LHSGVLV L +S+F NRA +AGLAV SLG+A +I +F +++++C SG+YG++ DE + TCR VVCS C C PG++ + ++ +PICE GV+ + G+++ L+L+ GYYRTS SQ+V +CY+EEACIGG++ S YC +GY G YCAVC+EG+ SG+Q+SC IC G +A+ + A+ V L LV+A LVRV D D + W + + RDR++ A PLT+IKIV+V WQI+TQ S VV+V YP Y +FL L+VVNF++G +LS+SC+ NFY RL T+GP+ + G LA Y + RN S M + KHLS+ LF+ F++YSSVS+ IF+TFVC+ LD GV Y+RADY L C T H MAYAG M LVYP+GIP V++W L +N+H + + T P D + + +L + YK RYY+EV+ECGRR+ L GLA F+ P S+AQ+AIE + A F A+ ++LSPF +P D WLYR GAWII+ SMYLALLLKVDA+D+++ SQ FA +LIAAH M LV++V A+LSV R V +RD RSV+ S Q HD + +S S
Sbjct: 492 GGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNC-LGGAPR-LDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSV----RRGLV-----TMRDQPAANRSVRGSSFAQGHDGKTGASES 1098
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 1.120e-135 Identity = 242/572 (42.31%), Postives = 355/572 (62.06%), Query Frame = 1
Query: 154 LQGGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVSFRNSSFFCGSGEYGFDDIDEGAETCRIEVVCSRCNIECNKVPGNISLDEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGGSNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGKWERWFLA-FRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALLSV 1866
+ GG + H+G L + ++ F SN AG+ G AV S+G+ V+F +++ C GE +D E ++CR E+ C+RC+ +C+ +P ++++ + T+P+C +G + +G +V TLDL +GYYRTS SQ V ECY AC GG++ NYCA GY GPYC+VC +G+ G Y C+ C G+ +AV A +V A LVRV D +S + + + L+ F V+ AFPLT +KIV+V WQIITQ + YP Y +FL L+ VN ++G ILS SCV T+F++RL++ TIGP+ +L LA+ + RN S ++ +V +KHLS LF++F +YSSVS+T+F+TFVCD LD GV+Y+RADY L C T + F YA M VYPIGIPA FAW+L +N+ ++ + Q + ++A YK +RYYYE++E RR+VL G+AVF+ PGSSAQ+A+ L AV F + E LSPFT +DM LYR+G ++ S+Y+ALLLKV+ +++ + + + F +LI A+ CMA+ LVV + L V
Sbjct: 468 ISGGTIFHTGHL-GMIETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEA----------YKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLV 1027
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 4.490e-134 Identity = 244/531 (45.95%), Postives = 333/531 (62.71%), Query Frame = 1
Query: 295 NSSFFCGSGEYGFD-----DIDEGAETCRIEVVCSRCNIECNKVPGNIS--LDEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGGSNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGK--WERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALL 1860
++ F+C GE+G + D+ GA+ CR VCSRC EC+ + + +D TLP CE P+G T+ G ++ TL+++ G+YR+S S D+REC+ ++AC GGS YCA+GY GPYCAVC G++ G+ +C C G K +A+ AAA+ + L +V+ LV V + + G W R A++ RV PLTA+KIV+V WQI+TQ S V VEYP Y +FL + VVN ++G ILS +CV+ TNFY+RL++ TIGP+ +LG L Y A RN +M V +HLSV LF++F++Y++VSYTIFETFVCD LD G +Y+RADY L C T H + YAG LVYP+GIP VF W LF N+H ++ Q + E + +L PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A F + EILSPF P++MWLYR G ++++ SMYLALLL+VD +D+ SQ VF+ +++ AH M LV+V LL
Sbjct: 513 DNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELK----------QEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 447 bits (1150), Expect = 3.580e-132 Identity = 240/523 (45.89%), Postives = 331/523 (63.29%), Query Frame = 1
Query: 301 SFFCGSGEYGFDDIDEGAETCRIEVVCSRCNIEC-NKVPGNISL-DEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGGSNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRS-GKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALL 1860
SF+C G + + EG + CR +VCSRC EC +++ +++ D LP CE VP+G T G ++ TL+++ GYYR+S S D+REC+ E+AC GG YCA GY GPYCAVC GF+ G+ +SC C G + A +AV V+VL + A LV V +++ S ++ +W++ ++ R+ PLTAIKIV+V WQI+TQ S V VEYP Y +FL + VVN ++G ILSL+CV T+FY+RL+L TI P +LG L Y L+M V H+HLSV LF++F++Y++VSYTIFETFVCD LD G +Y+R+DY L C T+TH + YAG M LVYP+GIP VF W LF ++H ++ R + + ++ PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A+ F + E LSPF P++MWLYR G ++++ SMYLALLL+VD +D+ SQ VF+ +L+ AH M LV+V+ LL
Sbjct: 526 SFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWE----------PYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 449 bits (1154), Expect = 3.800e-132 Identity = 242/535 (45.23%), Postives = 333/535 (62.24%), Query Frame = 1
Query: 298 SSFFCGSGEYGFD-----DIDEGAETCRIEVVCSRCNIECNKVPGNIS--LDEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGGSNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDR-------SGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALL 1860
+ F+C GE+G + D+ GA+ CR VCSRC EC + +D TLP CE P+G T+ G ++ TL+++ G+YR+S S D+REC+ ++AC GGS YC++GY GPYCAVC G++ G+ +C C G+ K +A+ AAA+ ++ L ++V+ LV V + + S W R A + RV PLTA+KIV+V WQI+TQ S V +EYP Y +FL + VVN ++G ILS +CV+ TNFY+RL++ TIGP+ +LG L Y A RN +M V +HLSV LF++F++Y++VSYTIFETFVCD LD G +Y+RADY L C T H + YAG LVYP+GIP +F W LF N+H ++ Q + E + +L PYK + YYYEVVEC RR+ L G AVFIYP SSAQ+AI L A F + EILSPF P++MWLYR G ++++ SMYLALLL+VD +D+ SQ VF+ +++ AH M LV+VV LL
Sbjct: 490 NDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELK----------QEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 366 bits (939), Expect = 8.480e-114 Identity = 197/379 (51.98%), Postives = 258/379 (68.07%), Query Frame = 1
Query: 730 AAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALLSV 1866
A A L+VV LV+A LVRV D N+ + + R+R+ PLT+IKIV+V WQI+TQ S VV+V YP Y FL L++VNFN G ILS SCV TNFY RL+ TIGP+ +LGALA+ Y + RN S + + HKHLS+ LF++F++YSSVS+ IF+TFVC+ LD GV Y+RADY L C TDTH YAG M VYP GIPA F L +N+H + ++ A G + + + + +L APYK RYY+EVVECGRR+ L GLAVFIYPGS+AQ+A+E +FA FF + ++LSPF +PLD WLYR GAW+I++SM+L LLLKVDA+D+++ SQ +FA LLI+AH M L + V A+LSV
Sbjct: 11 AIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVD--ANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSV 387
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 354 bits (909), Expect = 2.360e-109 Identity = 200/393 (50.89%), Postives = 262/393 (66.67%), Query Frame = 1
Query: 769 LVVAYLVRVEDSSNSDRS--GKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALLSVFTVFREAHVIEVPIPVRDVSQPTRS 1941
LV+ LVRV D + +S GKWER FL+ RD + A PLTAIKI++V WQI+TQ + VV VEYP Y FL L++VNFN+G LS C+ TNFY RL TI P+A+LG LA + A N S + M KHLS+ LF++F +YSSVS+TIF+TF+C+ LD V Y+RADY L C T TH I YAG M LVYPIGIPAVFAW L +N+ + R G + PE + + +L PYK RY+YE+VECGRR+VL GLAVF++PG++AQ+AIE FA +FE+L+PF +P+D WLYR GA +++ SMYLALLLKVDA+D+ + SQ VFA +L+AAH M L +++ +LLS V EA +V + V++ TRS
Sbjct: 3 LVIVDLVRVVDDGDGTKSRVGKWER-FLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDL----VQDRSGGTTTPE---NLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRS 387
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 358 bits (918), Expect = 1.080e-103 Identity = 218/573 (38.05%), Postives = 323/573 (56.37%), Query Frame = 1
Query: 160 GGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVSFRNSSFFCGSGEYGFDDIDEGAETCRIEVVCSRCNIECNKVPGNISLDEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGG-SNASNYCAQGYAGPY-----CAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVE-DSSNSDRSGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTT-NFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVN--HKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVV 1848
GGA+ G V + SF SN A GLA+ + A+ I+G SF + +C +G Y D EG + R E VC C EC+ S P CE+ + + G+++ TLD+ GY+R ++ S + CY +AC GG + A ++CA GY GP C+VCE GF ++C C S + + A +V +F + YL+ E D N+ F R++ A P+ +KI++V WQI+TQ + V ++ YP Y +FL + VVNF++GS L+ C++ +F++RL+L T+GP+ +G L + YR AV RNG + + N HKHLS L L FL+YSSVS T+F+TF C+ LD G+ Y+R DY + C HK F YAG M +VYP+GIP ++A +LF + + + + ++P + L PY+ R+YYEV+ECGRR++L G+ FI+P +AQIAI L A FF +FE++SP+T+ D WL R G I++LSM+ ALLLKVD + + SQ+VFA + +A H + L +VV
Sbjct: 484 GGAMRLGGT-VDVRNCSFLSNSATSRGLAIAVVAFAN-ISGASFDRNELYCEAGLYREDT--EGEPSARFETVCLDCP-ECDDCHVTRS---SVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEGNAG----------CFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTV---AQP--------IAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVV 1027
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 352 bits (903), Expect = 5.680e-101 Identity = 225/621 (36.23%), Postives = 339/621 (54.59%), Query Frame = 1
Query: 160 GGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVSFRNSSFFCGSGEYGFDDIDEGAETCRIEVVCSRC--NIECNKVPGNISLDEGT-LPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGG-SNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTN--FYERLVLVTIGPIAMLGALAIIYRFAVIRN----GRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPA--RMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMALVLVVYALLSVFTVFREAHVIEVPIPVR----DVSQPTRSVQSLDQDHDNQ 1974
GGAL G + +F +N A GLA+ ++G + I+ F ++FFC +GE+ + E ++ R + VC C EC + S+ E P C V +AG+S+ TL + GY+R SN S + CY EAC+GG + N C GY GPYCAVCE G+ S ++C C S + V AA +V A+L+ E S S R+ PL + KI+IV WQI+TQ + ++ +P Y +F+ L VVNF++GS+++ C N F++RL++ T+GP+ ++G LA Y A RN G S + ++ HKHLS L + FL+YSSVS T+F+ F CD LD G Y+RADY + C + H+ YA FM +YP+GIP ++A++L H + L P + QS + ++ PY+ R+YYEV+ECGRR++L G+ VFIYP ++AQ+A+ L A FF ++E+L+P+ + DMWL R G I++LSM+ LLLKVD +D+ T SQ VFA +++A H M L ++V A+ + + V E +P R +Q +RS ++L+ D +
Sbjct: 582 GGALQLGGK-TNVDGCAFVANSASSRGLAIAAVGFVN-ISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECY----SCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGEVSEQS-----------CLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLL---HHRRDVLMDPTADKASAQSTADLWE----------PYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYASSKGQPVSEHSVPSRRTFGPAAQRSRSTRALETAEDEE 1172
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 342 bits (876), Expect = 9.060e-97 Identity = 209/560 (37.32%), Postives = 315/560 (56.25%), Query Frame = 1
Query: 160 GGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVSFRNSSFFCGSGEYGFDDIDEGAETCRIEVVCSRCNIECNKVPGNISLDEGTLPICEVVPKGVNRTKAGMSVVTLDLIDGYYRTSNMSQDVRECYKEEACIGG-SNASNYCAQGYAGPYCAVCEEGFTSGFQYSCYICQGSEKWAAVCGAAAVLVVVLFVATLVVAYLVRVEDSSNSDRSGKWERWFLAFRDRVICAFPLTAIKIVIVTWQIITQISGVVSVEYPPTYGNFLEYLSVVNFNMGSILSLSCVFTTNFYERLVLVTIGPIAMLGALAIIYRFAVIRNGRSILSMTSVNHKHLSVGLFLLFLLYSSVSYTIFETFVCDILDSGVAYVRADYGLECLTDTHKIFMAYAGFMALVYPIGIPAVFAWVLFTNQHSIENLNTPARMGFQSEPECFDAVNVVNNLLAPYKRNRYYYEVVECGRRLVLAGLAVFIYPGSSAQIAIEALFAVFFYAMFEILSPFTNPLDMWLYRFGAWIIYLSMYLALLLKVDAADKETYSQNVFAWLLIAAHGCMAL 1836
GG L +G T S ++ + G AV ++G + ++F + F C G Y +D A E C C C+ + P C V + + +++ L + GY+R S S++V CY +AC+GG + + YC +GY GPYCAVC +G+T+ ++C C G A+ AA + VVVL VA V +Y + S R G +A + I PL ++KIVIV WQI+TQ + V +V YP Y FL+ L V NF++ +LS C+F +F++RL+ T+ P+ L LA Y AV N S+ + +KH+S+ L L FL+YSSVS T+F+ FVC+ L+ G Y+RADY ++C + HK F YAGFM +VY +GIPA++A++LF ++H +++ ++ E ++L PYK + +YYEV+ECGRR++LAG+ VFI+P ++AQIAI + A F + E L+PF + D WL R G ++++SMY+ALLLKVD + + SQ V+ +L+AAH CM L
Sbjct: 692 GGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMY----LDYNASGNPYEAACGGCETACD----GCFFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIAL--AAVLAVVVLCVAFAVASY-------AMSGRVGDVRSGVVARLGQYI---PLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKD--------HHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMIL 1223 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61.13640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61.13640.1 >prot_H-elongata_contig61.13640.1 ID=prot_H-elongata_contig61.13640.1|Name=mRNA_H-elongata_contig61.13640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=628bp MYLLSGLQGGALLHSGVLVALTQSSFESNRAGEAGLAVMSLGLADDIAGVback to top mRNA from alignment at H-elongata_contig61:8058..12146- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61.13640.1 ID=mRNA_H-elongata_contig61.13640.1|Name=mRNA_H-elongata_contig61.13640.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4089bp|location=Sequence derived from alignment at H-elongata_contig61:8058..12146- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61:8058..12146- >mRNA_H-elongata_contig61.13640.1 ID=mRNA_H-elongata_contig61.13640.1|Name=mRNA_H-elongata_contig61.13640.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3768bp|location=Sequence derived from alignment at H-elongata_contig61:8058..12146- (Himanthalia elongata Himel1 dioecious)back to top |