prot_H-elongata_contig6096.13638.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6096.13638.1
Unique Nameprot_H-elongata_contig6096.13638.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.360e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYG-GQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  115 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 230          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.450e-15
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITY-GGQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D A+A RAV R+C +P  VH K  + I+ Y+  T    IT+ GG   G+ M  + D+DY +    RR VS  ++M V G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  122 RPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLR 237          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.040e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYG-GQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  170 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 285          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.590e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYG-GQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  232 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 347          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: UPI00092EAAE8 (uncharacterized protein LOC109329342 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092EAAE8)

HSP 1 Score: 80.5 bits (197), Expect = 3.080e-15
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYGG-QGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEIL 115
            R D A AV  V R+  +PG VH K V  IM YL  T D  + YG  +G G  ++ Y DSDY   L+ RR ++  V  L     SW +T+Q + A  T+EAEY+A+ E +KE +
Sbjct:  117 RPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVIGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTEAVKEAI 229          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.120e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYG-GQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  122 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 237          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: UPI00092EA0BB (uncharacterized protein LOC109342419 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092EA0BB)

HSP 1 Score: 80.5 bits (197), Expect = 3.150e-15
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYGG-QGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEIL 115
            R D A AV  V R+  +PG VH K V  IM YL  T D  + YG  +G G  ++ Y DSDY   L+ RR ++  V  L     SW +T+Q + A  T+EAEY+A+ E +KE +
Sbjct:  203 RPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVIGYVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTEAVKEAI 315          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5K3H6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H6_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.150e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITY-GGQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct:  768 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFENGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 883          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 4.350e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYG-GQGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEILNFR 118
            R D ANAVRAV R+C +P  VH K  + I+ Y+  T    IT+  G   G+ M  + D+DY +    RR VS  ++M   G  +W+S  Q+     T+EAEYVA+ + +KE+L  R
Sbjct: 1225 RPDIANAVRAVARYCASPKMVHWKAAVGILGYVRRTSWMGITFERGVVTGMGMQVFVDADYASKATDRRSVSGGLVMCGGGCATWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 1340          
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Match: A0A2Z7C9U2_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7C9U2_9LAMI)

HSP 1 Score: 78.6 bits (192), Expect = 5.700e-15
Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    4 RLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYGG-QGCGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTSEAEYVALLEEIKEIL 115
            R D A+AV  V RF  NPG  H + +  +M YL  T++  + YGG Q  G  ++ Y DSDY   ++TRR ++  V  +     SW + +Q + A  T+EAEY+A+ E +KE L
Sbjct:   92 RPDLAHAVSVVSRFMANPGKCHWQALKWMMRYLKGTQNLGLVYGGNQTGGEAVLGYVDSDYAGSIDTRRSLTGYVFTVYGTAVSWKANLQSVVALSTTEAEYIAVTEAVKEAL 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6096.13638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP70_9PHAE1.360e-1539.66Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2P8_9PHAE1.450e-1539.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE2.040e-1539.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE2.590e-1539.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00092EAAE83.080e-1541.59uncharacterized protein LOC109329342 n=1 Tax=Lupin... [more]
A0A6H5KD11_9PHAE3.120e-1539.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00092EA0BB3.150e-1541.59uncharacterized protein LOC109342419 n=1 Tax=Lupin... [more]
A0A6H5K3H6_9PHAE3.150e-1539.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCK7_9PHAE4.350e-1539.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z7C9U2_9LAMI5.700e-1538.94Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6096contigH-elongata_contig6096:5573..5929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6096.13638.1mRNA_H-elongata_contig6096.13638.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6096 4892..6070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6096.13638.1 ID=prot_H-elongata_contig6096.13638.1|Name=mRNA_H-elongata_contig6096.13638.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MMRRLDTANAVRAVPRFCENPGPVHKKVVIKIMSYLLHTRDRRITYGGQG
CGLCMVAYTDSDYGACLNTRRLVSRTVLMLVKGMTSWYSTIQELTASRTS
EAEYVALLEEIKEILNFR*
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