mRNA_H-elongata_contig609.13631.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 667 bits (1721), Expect = 1.580e-219 Identity = 386/763 (50.59%), Postives = 491/763 (64.35%), Query Frame = 3
Query: 516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNV-EMRLLEGASRVSCTDYG-----GIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGN-DCVSSTSPG-VSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVK-------EPIKVRGCCRDAWIHFRPNAWRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAALPAVCVAY 2759
L GNPW PPE VVE G+ AV +L DV+ AK AGA V SLQ++KVVLVGSA+AGKTS+M SI+AG G PTEGTP + STVG+ L L+ T VEF+DCAGQVDYAGMHQTFLT RALYLLV D+T++ GVD DL K +H+DIMRWLY L+LRAPG+TV++VANKCD S+ F+ET R+ VR+++ W + RGL +V ++ LL G SRVSC + G G+ L+ IS Q AT+I +PPAW+LAL+VI ALR P+ A R+ L L D A++ A F +K EL +++ + DV A N SAL+GALWIS+FAG L +D GD IFLDV WLS LSPI+SHKL+ + F + L RD L DG+LR EFA H+W + + V SE V +ALF VL+KLG+ L +GR +L + D + T+P VS S DMLVIMRL ETC++ QR L + + R V KW+FD AGPPYGL+ERLIASCHV+G VE G CWRYGA+F+SH M GR VR Y A+ + + ERV T ++ GPL++ERVW A+RYVASAM+ +S+EWPGVLW GW C KHP+ +++A EA + PLLP AA P CDC LE G L L + LG VIDT K DPFE + E C R+A+ H+ P+AWR L L++ LF +A V GI E+ LW +SL V L+V ++ A AY
Sbjct: 28 LHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVD--DLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGV-ADVHAFAFISKDELSRKWRSVVDNLRDDVPA----AMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWLWM-RDDLAGDGILRREFALHIWRESVGEVVMESEE-VAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRT-LFDGLASKMPRDR-VTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMT----SYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAA-PDARRCDCLLEPGGVLRLAVEELGPVIDTGK-DPFEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKWLFGLAVVLFTTAVVAGIVEDKETLWKSSLGVCCVLMVFSVVASVFAY 773
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 628 bits (1619), Expect = 2.190e-202 Identity = 362/770 (47.01%), Postives = 494/770 (64.16%), Query Frame = 3
Query: 516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLN---DHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGND--CVSSTSPGVSKSKDMLVIMRLPETC-SDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEAAEPVPS-GCDCTLEANGGLGLVLSRLGKVIDTRK--VDPFEKVKEPIKVRGCCRDAWIHFRPNA-------WRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAALPAVCVAYRYMVRN 2777
LGGNPW PPE VVE+G+ AV ++L DV+ A+ AGA V +L+++KVVLVGS+ AGKTS++ SIV G G PT GTP EVSTVGI LLR+ L+GTAVEFYDCAGQVDY GMHQ FLT RALYLLVWDV R G +DL +V+ +DIMRWLY LHLRAPG+TVI+VANKCD S+ DF+ T V+ V + K+W+ RG + + +++M +LE +S VSC D G++E++ RI+AQ A S+++PPAW LAL +DALRD R+P +A R+ L L G+R D E ++F T+ L + +++ V +++ + A + A++GALWISEFAGQVL + +GD +FLDV WLS L PI+ HKL ++FP R+ LV +G+LR FA HLW+ V++ VP V+DAL RV+V LG+ L L ++L +++ P +S+ +DMLVIMRLPETC ++ + ++L S M + REV W+FD+AGPPYGLVER+IASCH +GVVE G+CWRYGA+F+S AM G RLYTF + YD + G R+L++RM GPL++ RVWAALR+VAS++V IS++WPGVLWEGWP C + +R + A +A I LL +AA GCDC L LVL RLGKV+DT+ E V+ C++ + P+A W ++A + +TL E +A W L ++ ++ A A VA R+ +R
Sbjct: 181 LGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSSTRM-DMDMTVLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSL-GSRPKVGADREPG----RSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQH-FAGMRNELVHNGILRIAFAEHLWSDVMEITVP---EEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISR-QDMLVIMRLPETCGAEHELQELISDQMRR-HSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYD---SAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPPASDVEGVRRTKAACAGCKETFSVLEPSAGSAAGWCWGASLAFLGVGVTL---------REFDATGWGICLGLMGLFVIGAGAATLVACRFEIRT 925
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 587 bits (1512), Expect = 1.350e-184 Identity = 343/766 (44.78%), Postives = 446/766 (58.22%), Query Frame = 3
Query: 516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSK----DMLVIMRLPETCSDAQREDLGSAI--MEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEA-AEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPI------------KVRGC------CRDAWIHFRPNAWRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAA 2735
L NPW PPE +V +G+ AV +L DV+ A+ AGA V +L ++KVVL+GS AGKTS++ SIV G T GT EEVSTVGI L R+ G VEFYDCAGQVDY GMHQTFLT RALYLLVWDV+R G +SNDL KVV EDIM+WLY LHLR PG+ V++VANKCD S+ +F T V++ R+ L++WQ NR ++ +L+ S VSC D GG+ E++ R+ AQGATSI +PP+W LAL +DALRD R+P A R L L D E +F T++ LF + ++ V+ ++ + A + A++GALWISEFAG +L + D+IFLDV WLS L PI+SHKL FP + L +D LV +GVLR +FA +LW L+ P SE V+DAL VL LG+ L LGR S+ P + + DMLVIMRLP+TC + + +L + + +G EV KW+FD AG +GLVER+IASCH +G V G+CWRYGA+F+S+A G LY+F I YD G ERVL + M GP +R+WAALR+VAS++V S WPGV WEG P C H RM+ P EA I P+L + P+ CDC + LVL RLG +IDT+K DPF + + GC C + +RP AW+ GT++ TLF V E W + V LL A
Sbjct: 342 LQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQG----NRKSPGVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDF----DAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLWD--LEMEAPPSEE-VMDALCGVLHSLGVALPLGREE---RHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNW-LYSFVIRYD---EEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDTQKDDPFGHLHHDEGGSAISQDNRGEEAGGCAAMSASCSRVFHAWRPLAWKTAAGFGTVAATLF--GAVDSAVEPEDTAWKVCVGFVTLLLFGA 1087
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.390e-44 Identity = 189/728 (25.96%), Postives = 306/728 (42.03%), Query Frame = 3
Query: 501 LIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYG-GI----------------------RELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDS-------LVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAA---GPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAP----PAEAIINGPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPIKVRGC 2564
L+ DL NPW+ PPEA+V G++AV + +A G + +KVV++G GKTS+ +SI G C T+ E STV +++ + ++G + +DCAGQV Y G+ Q FLTPRA+YLLVWD + +D +L + I WL L R P A VI+V NK DR + + V+ R+ LK W ++ H + + L +G S VSC G G+ R + + + ++ +PP++ LAL++++ L R + + + T+A+L E KV AG + + A+ GA+ I ++ G + ++ G+ +FLDV W + VL P+ SH RR+ + L R + L + V + A LWTP L + L + G T L ND + +++++R+ D R +E ++ E + + G P G VERL+A C +G WRYGAL + K L++ ++ Y + +++L L + G E WAAL V S M+ + E+PG+ E C +H M + P ++ + + +G D A L +V K +D + F + E + +GC
Sbjct: 498 LVTLDLSRNPWEHPPEAIVAGGVQAVRGYY----DAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKA----HGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSR--RKAEQRTRGI------------------TRADL---------EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSH--RRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHL-----------------LLALKSAGLTFPLPND----------PNGGLVILLRM-----DTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFP--FWRYGALIVGNGAEKG------LFSLSVEYS-------EEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAA---LQVVEFSDEKFLDEPLREQFAENAEKVARQGC 1130
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 184 bits (467), Expect = 2.420e-43 Identity = 195/737 (26.46%), Postives = 309/737 (41.93%), Query Frame = 3
Query: 501 LIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTD---------YGG--------------IRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDS-------LVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCS---DAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFL----APPAEAIIN-GPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPIKVRGCCRDAWIHF 2588
L + DL NPW+ PPEA+V G++AV + A G + +KVV++G GKTS+ +SI G C T+ E STV +++ + ++G + +DCAGQV Y G+ Q FLTPRA+YLLVWD + +D +L + I WL L R P A VI+V NK DR + + V+ R+ LK W ++ H + + L +G S VSC +GG R + + + ++ +PP++ LAL++++ L R + + + T+A+L E KV AG + + A+ GA+ I ++ G + ++ G+ +FLDV W + VL P+ SH RR+ + L R + L + V + A LWTP L + L + G T L ND + +++++R+ T +RE+ A L + F PP G VERL+A C +G WRYGAL + K L++ ++ Y + + +L + ++G E WAAL V S M+ + E+PG+ E C +H M + APP ++ G P +P +G + A L +V + D F + E + +GC HF
Sbjct: 405 LRSLDLSRNPWEHPPEAIVAGGVQAVRGYYE----AMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKA----HGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSR--RKAEQRTRGI------------------TRADL---------EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSH--RRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHL-----------------LLALKSAGLTFPLPND----------PNGGLVILLRMDTTRPPEYSIRREEANQARKYDL----TLSVACSFSLGLPP-GFVERLLARCCHLGYPYP--FWRYGALIVGNGAEKG------LFSLSLDYS-------EHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPT-AGNNLLAAA---LQVVEFSDEEFFDEPLRQKFAENAEKVARKGCASQQGSHF 1045
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 176 bits (446), Expect = 6.670e-41 Identity = 184/658 (27.96%), Postives = 279/658 (42.40%), Query Frame = 3
Query: 441 CLLKSTDRSW*Q*LWKLEPNLIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALV------RQMLKDWQD-RRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHR-------DSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCR---EVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRM 2363
CLL S +R +++L + NPW+ PP+A+V GI AV + + G + +KVV+VG GKTS+ +SI G C T G EE STV +++ + L+G + +DCAGQV Y G+ Q FLTPRA+YLLVWD + ++ +L + I WL L R P A+VI+V NKCDR + T R V RQ L+ W + RG H R + + +G S VSC G+ + + + D+ D R + E +L L + + T+ +LE + ++ G + A + +A+ GA+ I ++ G + ++ G +FLDV W + VL P+ HK R+ + L R D L + VL + A LW PVL + L + G T L ND S LVI+ +T D G + E + +V + F PP G VERL+A C +G+ WRYGAL +G R+++ ++ Y + ++LT+ + G WAAL V S + + E+PG+ C H + M
Sbjct: 325 CLLDSLER-----IYRLS-------VAQNPWESPPDAIVVGGIPAVRAYFEAIYM----GGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEE-STVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA---IAPWLRHLTFRVPDASVILVGNKCDRVV-----RTRRTAVAVDVEHESRQWLESWIEIARG---HQPRGISLE--DGVSLVSCA-ASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPD--AAMAGAILIRKWEGGL--VEYGSYVFLDVEWFATVLDPLFCHK--RDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHL-----------------LLALKSAGLTFPLSND-----------SNGGLVILLRMDT---KPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLGLPYP--FWRYGALIVG------KGAEERMFSLSLEYS-------EARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGM 898
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.500e-33 Identity = 154/541 (28.47%), Postives = 236/541 (43.62%), Query Frame = 3
Query: 513 DLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-------GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLE-NIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGAL 2102
DL NPW+ PPEA+V G+ AV + + G + + +KVV+VG GKTS+ SI AG C T G + STV +++ + L+ G + +DCAGQ Y G+ Q FLTPRA+YLLVWD + +D +L + I WL + R P A V++V NK D + V+ R+ L W + +RH + ++ L G S VSC G A A S AW D + G+ + +++ ++D + T + +VL N++ E++ +V AG + AL GA+ I ++ G + ++ G+ IFLDV W +DVL P+ SHK + + ++ D L+ A H++ P L + + G+E + L L GL + G ++V++R+ R + Y R VV + F PP G VERL+A C +G WRYGAL
Sbjct: 29 DLSQNPWEHPPEAIVTGGMLAVRGYFEAIFR----GGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVD-STVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLA---IAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADDVERKSREWLTAWIE--SAHRH--QPPQLSLEAGVSLVSCAPSG---------RAGWAPSFGGRKAWPC-----DKNKPGQPGL-----FRRIIYNPVDD-------MRAVTMRLSPVYVLALNLLEELASRSRVDALGTAGTTAAASEAALSGAILIRKWEGGL--VEYGNYIFLDVGWFADVLDPLFSHKKDS----NGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAE--LAPHLLSALNSAGLTFPIPNDPFEG----------------LVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVV-QCSFRLGLPP-GFVERLLARCCHLGFPHP--FWRYGAL 503
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.520e-26 Identity = 155/588 (26.36%), Postives = 233/588 (39.63%), Query Frame = 3
Query: 516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDR-----RGLNRHVVRNVEMRLLEGASRVSCTDYG------------------GIRELVRRISAQGAT-----SIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHR-------DSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYD 2174
L NPW++PPEA+ GI AV + + G GKTS I G C T G E STV +++ + ++G + +DCAGQV Y G+ Q FLTPRA+Y+LVWD + ++ +L + I WL L R P A+VI+V NKCD + V A V + W + RG H R + + +G S VSC G L RRI+ A+ ++ +P ++ LALK+++ L +H++ V + + + VA+ M V V +A+ GA+ I ++ G ++ S +FLDV W + VL P+ HK R+ + L R D L D VL + A W ++P N GL++ +L D S G+ +L E A + DL +V + F PP G VERL+A C +G+ WRYGAL +G VR+++ ++ Y
Sbjct: 52 LAHNPWEYPPEAIAAGGIPAVRRYFEAIXXXXXXXXXXXXXXXXX----GEETVGKTS----IKTGRPCMTRGCGVE-STVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLNLEDL---GIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTV---VAADVEHESRQWLESLIEIARG---HQPRGISLE--DGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRS--KTEQHIRGVTRAILEDKWQTKVAE---------------MNRVGTSVSAPD---------AAMAGAILIRKWEGGLVEYSS--YVFLDVEWFATVLDPLFCHK--RDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR---FPSLPNDSNG------------GLVI------LLRMDTKPSPDYGI----------KLKEA-DQANKFDL------------RLVVECSFSLGLPP-GFVERLLARCCHLGLPYP--FWRYGALIVG------KGAEVRMFSLSLEYS 536
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE) HSP 1 Score: 100 bits (249), Expect = 2.850e-18 Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 3
Query: 513 DLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-------GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCD 1022
+L NPW+ PPEA+V G+ AV + + G + + +KVV+VG+ GKTS I AG C T G + STV +++ + L+ G + +DCAGQ Y G+ Q FLTPRA+YLLVWD + +D +L + I WL + R P A V++V NK D
Sbjct: 195 NLSQNPWEHPPEAIVTGGMLAVRGYFEAIFR----GGTTVVTRPLKVVIVGTETVGKTS----IKAGKPCMTRGGGVD-STVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLA---IAPWLRQMTFRVPDANVVLVGNKWD 359
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 3.850e-15 Identity = 139/610 (22.79%), Postives = 241/610 (39.51%), Query Frame = 3
Query: 483 WKLEPNLIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE---GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETT----NRVDALVRQMLKD----WQDRRGLNRHVVRNVEMR---LLEGASRVSCTDYGG----------------------------IRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSA--LDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLR------------------REMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSE--NRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCH-----VIGVVEQGVCWRYGALF 2105
+ +P L L N WK PP V++ G V +F + A++ G V+ +KVVLVG+ AGKT++ + ++ G + P V +++ + V +D AG DY HQ FLT +L++LV D+ +F S+ + + WL +L R PG+ V++VA D + GD E + ++++A + LK+ WQ + + + R L G++ D+ I E+ S +P +W V+DALR+G +P +AVR + L EG + F T+ F + E ++K G + S+ AL + + G VL+ + ++ L+V W++++L ++ H+L R + + + HR V G+L E+ LW V KAV E +R++D T L + GV + + +V RLP + + A +L +A+ + + F +A P G++ + + + G V W G F
Sbjct: 133 FNAKPWLRDIKLELNRWKNPPWQVIQGGWYQVISFYEGL--AQSGGVAVVPS--LKVVLVGAVHAGKTTLTRGLLDGK--LAKVPPPRTRGVDVHINPWTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSS-----TGDTVYVWLDSLLCRVPGSVVLVVATHAD-AFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVR-----LDGPLAPVEGRE--KREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLA--ACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRR-FVITGMLTKEYLRFLWREV--KAVQDEEVFDRLVD-----------------TMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGT----RMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAF 697 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig609.13631.1 >prot_H-elongata_contig609.13631.1 ID=prot_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=706bp MKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMback to top mRNA from alignment at H-elongata_contig609:3103..15789+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig609.13631.1 ID=mRNA_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=12687bp|location=Sequence derived from alignment at H-elongata_contig609:3103..15789+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig609:3103..15789+ >mRNA_H-elongata_contig609.13631.1 ID=mRNA_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4236bp|location=Sequence derived from alignment at H-elongata_contig609:3103..15789+ (Himanthalia elongata Himel1 dioecious)back to top |