mRNA_H-elongata_contig609.13631.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig609.13631.1
Unique NamemRNA_H-elongata_contig609.13631.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 667 bits (1721), Expect = 1.580e-219
Identity = 386/763 (50.59%), Postives = 491/763 (64.35%), Query Frame = 3
Query:  516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNV-EMRLLEGASRVSCTDYG-----GIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGN-DCVSSTSPG-VSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVK-------EPIKVRGCCRDAWIHFRPNAWRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAALPAVCVAY 2759
            L GNPW  PPE VVE G+ AV  +L DV+ AK AGA V SLQ++KVVLVGSA+AGKTS+M SI+AG G PTEGTP + STVG+ L    L+ T VEF+DCAGQVDYAGMHQTFLT RALYLLV D+T++ GVD  DL K +H+DIMRWLY L+LRAPG+TV++VANKCD S+  F+ET  R+   VR+++  W + RGL      +V ++ LL G SRVSC + G     G+  L+  IS Q AT+I +PPAW+LAL+VI ALR    P+ A R+ L L      D   A++ A  F +K EL     +++  +  DV      A   N  SAL+GALWIS+FAG  L +D GD IFLDV WLS  LSPI+SHKL+ + F +  L   RD L  DG+LR EFA H+W   + + V  SE  V +ALF VL+KLG+ L +GR  +L + D  + T+P  VS S DMLVIMRL ETC++ QR  L   +   +   R V  KW+FD AGPPYGL+ERLIASCHV+G VE G CWRYGA+F+SH M    GR VR Y  A+       +  + ERV T ++ GPL++ERVW A+RYVASAM+ +S+EWPGVLW GW  C KHP+  +++A   EA +  PLLP AA P    CDC LE  G L L +  LG VIDT K DPFE +        E      C R+A+ H+ P+AWR    L  L++ LF +A V GI E+   LW +SL V   L+V ++ A   AY
Sbjct:   28 LHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVD--DLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGV-ADVHAFAFISKDELSRKWRSVVDNLRDDVPA----AMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWLWM-RDDLAGDGILRREFALHIWRESVGEVVMESEE-VAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRT-LFDGLASKMPRDR-VTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMT----SYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAA-PDARRCDCLLEPGGVLRLAVEELGPVIDTGK-DPFEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKWLFGLAVVLFTTAVVAGIVEDKETLWKSSLGVCCVLMVFSVVASVFAY 773          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 628 bits (1619), Expect = 2.190e-202
Identity = 362/770 (47.01%), Postives = 494/770 (64.16%), Query Frame = 3
Query:  516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLN---DHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGND--CVSSTSPGVSKSKDMLVIMRLPETC-SDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEAAEPVPS-GCDCTLEANGGLGLVLSRLGKVIDTRK--VDPFEKVKEPIKVRGCCRDAWIHFRPNA-------WRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAALPAVCVAYRYMVRN 2777
            LGGNPW  PPE VVE+G+ AV ++L DV+ A+ AGA V +L+++KVVLVGS+ AGKTS++ SIV G G PT GTP EVSTVGI LLR+ L+GTAVEFYDCAGQVDY GMHQ FLT RALYLLVWDV R  G   +DL +V+ +DIMRWLY LHLRAPG+TVI+VANKCD S+ DF+ T   V+  V  + K+W+  RG +   + +++M +LE +S VSC D  G++E++ RI+AQ A S+++PPAW LAL  +DALRD R+P +A R+ L L G+R     D E      ++F T+  L    + +++ V  +++   +  A  +   A++GALWISEFAGQVL + +GD +FLDV WLS  L PI+ HKL  ++FP       R+ LV +G+LR  FA HLW+ V++  VP     V+DAL RV+V LG+ L L   ++L      +++  P +S+ +DMLVIMRLPETC ++ + ++L S  M   +  REV   W+FD+AGPPYGLVER+IASCH +GVVE G+CWRYGA+F+S AM    G   RLYTF + YD   +  G   R+L++RM GPL++ RVWAALR+VAS++V IS++WPGVLWEGWP C +   +R + A   +A I   LL +AA      GCDC       L LVL RLGKV+DT+       E V+        C++ +    P+A       W  ++A   + +TL          E +A  W   L ++   ++ A  A  VA R+ +R 
Sbjct:  181 LGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSSTRM-DMDMTVLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSL-GSRPKVGADREPG----RSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQH-FAGMRNELVHNGILRIAFAEHLWSDVMEITVP---EEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISR-QDMLVIMRLPETCGAEHELQELISDQMRR-HSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYD---SAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPPASDVEGVRRTKAACAGCKETFSVLEPSAGSAAGWCWGASLAFLGVGVTL---------REFDATGWGICLGLMGLFVIGAGAATLVACRFEIRT 925          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 1.350e-184
Identity = 343/766 (44.78%), Postives = 446/766 (58.22%), Query Frame = 3
Query:  516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSK----DMLVIMRLPETCSDAQREDLGSAI--MEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAPPAEAIINGPLLPEA-AEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPI------------KVRGC------CRDAWIHFRPNAWRVTVALGTLSLTLFCSATVPGITEENAMLWITSLSVVVFLLVAA 2735
            L  NPW  PPE +V +G+ AV  +L DV+ A+ AGA V +L ++KVVL+GS  AGKTS++ SIV   G  T GT EEVSTVGI L R+    G  VEFYDCAGQVDY GMHQTFLT RALYLLVWDV+R  G +SNDL KVV EDIM+WLY LHLR PG+ V++VANKCD S+ +F  T   V++  R+ L++WQ     NR      ++ +L+  S VSC D GG+ E++ R+ AQGATSI +PP+W LAL  +DALRD R+P  A R  L L      D E       +F T++ LF    + ++ V+ ++    +  A  +   A++GALWISEFAG +L +   D+IFLDV WLS  L PI+SHKL    FP + L   +D LV +GVLR +FA +LW   L+   P SE  V+DAL  VL  LG+ L LGR         S+  P  +  +    DMLVIMRLP+TC +  + +L   +  +   +G  EV  KW+FD AG  +GLVER+IASCH +G V  G+CWRYGA+F+S+A     G    LY+F I YD      G  ERVL + M GP   +R+WAALR+VAS++V  S  WPGV WEG P C  H   RM+   P EA I  P+L +      P+ CDC       + LVL RLG +IDT+K DPF  +                +  GC      C   +  +RP AW+     GT++ TLF    V    E     W   +  V  LL  A
Sbjct:  342 LQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQG----NRKSPGVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDF----DAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLWD--LEMEAPPSEE-VMDALCGVLHSLGVALPLGREE---RHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNW-LYSFVIRYD---EEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDTQKDDPFGHLHHDEGGSAISQDNRGEEAGGCAAMSASCSRVFHAWRPLAWKTAAGFGTVAATLF--GAVDSAVEPEDTAWKVCVGFVTLLLFGA 1087          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.390e-44
Identity = 189/728 (25.96%), Postives = 306/728 (42.03%), Query Frame = 3
Query:  501 LIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYG-GI----------------------RELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDS-------LVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAA---GPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFLAP----PAEAIINGPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPIKVRGC 2564
            L+  DL  NPW+ PPEA+V  G++AV  +     +A   G      + +KVV++G    GKTS+ +SI  G  C T+    E STV +++  + ++G  +  +DCAGQV Y G+ Q FLTPRA+YLLVWD  +   +D  +L  +    I  WL  L  R P A VI+V NK DR +       + V+   R+ LK W ++     H  +   + L +G S VSC   G G+                      R +   +  +   ++ +PP++ LAL++++ L       R   +  + +                  T+A+L         E     KV     AG  + +   A+ GA+ I ++ G +  ++ G+ +FLDV W + VL P+ SH  RR+ +    L   R +       L  + V   + A  LWTP L   +                 L  +   G T  L ND           +  +++++R+     D  R       +E ++   E   +     +   G P G VERL+A C  +G       WRYGAL   +   K       L++ ++ Y        + +++L L + G  E    WAAL  V S M+ +  E+PG+  E    C +H    M +      P   ++      +  +   +G D    A   L +V     K +D    + F +  E +  +GC
Sbjct:  498 LVTLDLSRNPWEHPPEAIVAGGVQAVRGYY----DAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKA----HGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSR--RKAEQRTRGI------------------TRADL---------EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSH--RRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHL-----------------LLALKSAGLTFPLPND----------PNGGLVILLRM-----DTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFP--FWRYGALIVGNGAEKG------LFSLSVEYS-------EEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAA---LQVVEFSDEKFLDEPLREQFAENAEKVARQGC 1130          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 2.420e-43
Identity = 195/737 (26.46%), Postives = 309/737 (41.93%), Query Frame = 3
Query:  501 LIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTD---------YGG--------------IRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDS-------LVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCS---DAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRMFL----APPAEAIIN-GPLLPEAAEPVPSGCDCTLEANGGLGLVLSRLGKVIDTRKVDPFEKVKEPIKVRGCCRDAWIHF 2588
            L + DL  NPW+ PPEA+V  G++AV  +      A   G      + +KVV++G    GKTS+ +SI  G  C T+    E STV +++  + ++G  +  +DCAGQV Y G+ Q FLTPRA+YLLVWD  +   +D  +L  +    I  WL  L  R P A VI+V NK DR +       + V+   R+ LK W ++     H  +   + L +G S VSC           +GG               R +   +  +   ++ +PP++ LAL++++ L       R   +  + +                  T+A+L         E     KV     AG  + +   A+ GA+ I ++ G +  ++ G+ +FLDV W + VL P+ SH  RR+ +    L   R +       L  + V   + A  LWTP L   +                 L  +   G T  L ND           +  +++++R+  T       +RE+   A    L     +     F    PP G VERL+A C  +G       WRYGAL   +   K       L++ ++ Y        + + +L + ++G  E    WAAL  V S M+ +  E+PG+  E    C +H    M +    APP   ++  G   P   +P  +G +    A   L +V     +  D      F +  E +  +GC      HF
Sbjct:  405 LRSLDLSRNPWEHPPEAIVAGGVQAVRGYYE----AMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKA----HGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSR--RKAEQRTRGI------------------TRADL---------EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSH--RRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHL-----------------LLALKSAGLTFPLPND----------PNGGLVILLRMDTTRPPEYSIRREEANQARKYDL----TLSVACSFSLGLPP-GFVERLLARCCHLGYPYP--FWRYGALIVGNGAEKG------LFSLSLDYS-------EHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPT-AGNNLLAAA---LQVVEFSDEEFFDEPLRQKFAENAEKVARKGCASQQGSHF 1045          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 6.670e-41
Identity = 184/658 (27.96%), Postives = 279/658 (42.40%), Query Frame = 3
Query:  441 CLLKSTDRSW*Q*LWKLEPNLIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALV------RQMLKDWQD-RRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHR-------DSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCR---EVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATDGQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCLKHPNSRM 2363
            CLL S +R     +++L        +  NPW+ PP+A+V  GI AV  +   +      G      + +KVV+VG    GKTS+ +SI  G  C T G  EE STV +++  + L+G  +  +DCAGQV Y G+ Q FLTPRA+YLLVWD  +   ++  +L  +    I  WL  L  R P A+VI+V NKCDR +      T R    V      RQ L+ W +  RG   H  R + +   +G S VSC    G+  +      +                + D+  D R     + E  +L    L +    +       T+     +LE   +    ++   G + A  +  +A+ GA+ I ++ G +  ++ G  +FLDV W + VL P+  HK  R+ +    L   R       D L  + VL  + A  LW PVL   +                 L  +   G T  L ND           S   LVI+   +T       D G  + E     +    +V +  F    PP G VERL+A C  +G+      WRYGAL         +G   R+++ ++ Y        +  ++LT+ + G       WAAL  V S  + +  E+PG+       C  H  + M
Sbjct:  325 CLLDSLER-----IYRLS-------VAQNPWESPPDAIVVGGIPAVRAYFEAIYM----GGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEE-STVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA---IAPWLRHLTFRVPDASVILVGNKCDRVV-----RTRRTAVAVDVEHESRQWLESWIEIARG---HQPRGISLE--DGVSLVSCA-ASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPD--AAMAGAILIRKWEGGL--VEYGSYVFLDVEWFATVLDPLFCHK--RDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHL-----------------LLALKSAGLTFPLSND-----------SNGGLVILLRMDT---KPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLGLPYP--FWRYGALIVG------KGAEERMFSLSLEYS-------EARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGM 898          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.500e-33
Identity = 154/541 (28.47%), Postives = 236/541 (43.62%), Query Frame = 3
Query:  513 DLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-------GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEMRLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLE-NIMREVSRDVKVTGQTAAGFNMTS---ALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGAL 2102
            DL  NPW+ PPEA+V  G+ AV  +   +      G   +  + +KVV+VG    GKTS+  SI AG  C T G   + STV +++  + L+       G  +  +DCAGQ  Y G+ Q FLTPRA+YLLVWD  +   +D  +L  +    I  WL  +  R P A V++V NK D          + V+   R+ L  W +    +RH  +  ++ L  G S VSC   G          A  A S     AW       D  + G+  +       +++   ++D        +  T +    +VL  N++ E++   +V     AG    +   AL GA+ I ++ G +  ++ G+ IFLDV W +DVL P+ SHK       +  +     ++  D  L+   A H++ P L + + G+E  +   L   L   GL   +      G                ++V++R+        R  +        Y  R VV +  F    PP G VERL+A C  +G       WRYGAL
Sbjct:   29 DLSQNPWEHPPEAIVTGGMLAVRGYFEAIFR----GGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVD-STVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLA---IAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADDVERKSREWLTAWIE--SAHRH--QPPQLSLEAGVSLVSCAPSG---------RAGWAPSFGGRKAWPC-----DKNKPGQPGL-----FRRIIYNPVDD-------MRAVTMRLSPVYVLALNLLEELASRSRVDALGTAGTTAAASEAALSGAILIRKWEGGL--VEYGNYIFLDVGWFADVLDPLFSHKKDS----NGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAE--LAPHLLSALNSAGLTFPIPNDPFEG----------------LVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVV-QCSFRLGLPP-GFVERLLARCCHLGFPHP--FWRYGAL 503          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 3.520e-26
Identity = 155/588 (26.36%), Postives = 233/588 (39.63%), Query Frame = 3
Query:  516 LGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDR-----RGLNRHVVRNVEMRLLEGASRVSCTDYG------------------GIRELVRRISAQGAT-----SIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLRREMFPSAALCKHR-------DSLVFDGVLRWEFAFHLWTPVLKKAVPGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYD 2174
            L  NPW++PPEA+   GI AV  +   +                     G    GKTS    I  G  C T G   E STV +++  + ++G  +  +DCAGQV Y G+ Q FLTPRA+Y+LVWD  +   ++  +L  +    I  WL  L  R P A+VI+V NKCD  +         V A V    + W +      RG   H  R + +   +G S VSC   G                      L RRI+   A+     ++ +P ++ LALK+++ L           +H++ V   + + +    VA+               M  V   V             +A+ GA+ I ++ G ++   S   +FLDV W + VL P+  HK  R+ +    L   R       D L  D VL  + A   W      ++P   N             GL++      +L  D   S   G+          +L E    A + DL             +V +  F    PP G VERL+A C  +G+      WRYGAL         +G  VR+++ ++ Y 
Sbjct:   52 LAHNPWEYPPEAIAAGGIPAVRRYFEAIXXXXXXXXXXXXXXXXX----GEETVGKTS----IKTGRPCMTRGCGVE-STVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLNLEDL---GIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTV---VAADVEHESRQWLESLIEIARG---HQPRGISLE--DGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRS--KTEQHIRGVTRAILEDKWQTKVAE---------------MNRVGTSVSAPD---------AAMAGAILIRKWEGGLVEYSS--YVFLDVEWFATVLDPLFCHK--RDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR---FPSLPNDSNG------------GLVI------LLRMDTKPSPDYGI----------KLKEA-DQANKFDL------------RLVVECSFSLGLPP-GFVERLLARCCHLGLPYP--FWRYGALIVG------KGAEVRMFSLSLEYS 536          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.850e-18
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  513 DLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE-------GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCD 1022
            +L  NPW+ PPEA+V  G+ AV  +   +      G   +  + +KVV+VG+   GKTS    I AG  C T G   + STV +++  + L+       G  +  +DCAGQ  Y G+ Q FLTPRA+YLLVWD  +   +D  +L  +    I  WL  +  R P A V++V NK D
Sbjct:  195 NLSQNPWEHPPEAIVTGGMLAVRGYFEAIFR----GGTTVVTRPLKVVIVGTETVGKTS----IKAGKPCMTRGGGVD-STVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLA---IAPWLRQMTFRVPDANVVLVGNKWD 359          
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.850e-15
Identity = 139/610 (22.79%), Postives = 241/610 (39.51%), Query Frame = 3
Query:  483 WKLEPNLIASDLGGNPWKFPPEAVVEQGIEAVNTFLSDVQNAKAAGAPVISLQIIKVVLVGSAAAGKTSVMKSIVAGAGCPTEGTPEEVSTVGINLLRYILE---GTAVEFYDCAGQVDYAGMHQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGATVIMVANKCDRSMGDFSETT----NRVDALVRQMLKD----WQDRRGLNRHVVRNVEMR---LLEGASRVSCTDYGG----------------------------IRELVRRISAQGATSIQMPPAWNLALKVIDALRDGREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVSRDVKVTGQTAAGFNMTSA--LDGALWISEFAGQVLSIDSGDIIFLDVNWLSDVLSPIMSHKLR------------------REMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAVPGSE--NRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLVIMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLIASCH-----VIGVVEQGVCWRYGALF 2105
            +  +P L    L  N WK PP  V++ G   V +F   +  A++ G  V+    +KVVLVG+  AGKT++ + ++ G     +  P     V +++  +         V  +D AG  DY   HQ FLT  +L++LV D+ +F    S+       + +  WL +L  R PG+ V++VA   D + GD  E +    ++++A +   LK+    WQ  +       +  + R   L  G++     D+                              I E+    S        +P +W     V+DALR+G +P +AVR     +   L   EG     + F T+   F     +  E   ++K  G  +      S+     AL + +  G VL+  +  ++ L+V W++++L  ++ H+L                   R +  +  +  HR   V  G+L  E+   LW  V  KAV   E  +R++D                 T  L +        GV +  + +V  RLP + + A   +L +A+ +       + F    +A   P G++ + +         + G     V W  G  F
Sbjct:  133 FNAKPWLRDIKLELNRWKNPPWQVIQGGWYQVISFYEGL--AQSGGVAVVPS--LKVVLVGAVHAGKTTLTRGLLDGK--LAKVPPPRTRGVDVHINPWTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSS-----TGDTVYVWLDSLLCRVPGSVVLVVATHAD-AFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVR-----LDGPLAPVEGRE--KREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLA--ACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRR-FVITGMLTKEYLRFLWREV--KAVQDEEVFDRLVD-----------------TMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGT----RMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAF 697          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig609.13631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE1.580e-21950.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE2.190e-20247.01Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI1.350e-18444.78LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI1.390e-4425.96LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI2.420e-4326.46LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI6.670e-4127.96LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JRW5_9PHAE1.500e-3328.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSC0_9PHAE3.520e-2626.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ5_9PHAE2.850e-1837.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUH6_ECTSI3.850e-1522.79LRR-GTPase of the ROCO family, incomplete sequence... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig609contigH-elongata_contig609:3103..15789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score538.1
Seed ortholog evalue6.1e-150
Seed eggNOG ortholog2880.D7FVX5
Preferred nameSLITRK2
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs2CMPC@1,2QR6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons14
Model size4257
Cds size2118
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig609.13631.1prot_H-elongata_contig609.13631.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig609 9835..14146 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930983.5996962-UTR-H-elongata_contig609:3102..32021622930983.5996962-UTR-H-elongata_contig609:3102..3202Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 3103..3202 +
1691679650.4700658-UTR-H-elongata_contig609:3102..32021691679650.4700658-UTR-H-elongata_contig609:3102..3202Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 3103..3202 +
1622930983.6163144-UTR-H-elongata_contig609:3867..39391622930983.6163144-UTR-H-elongata_contig609:3867..3939Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 3868..3939 +
1691679650.4848819-UTR-H-elongata_contig609:3867..39391691679650.4848819-UTR-H-elongata_contig609:3867..3939Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 3868..3939 +
1622930983.6305857-UTR-H-elongata_contig609:4517..45891622930983.6305857-UTR-H-elongata_contig609:4517..4589Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 4518..4589 +
1691679650.4950562-UTR-H-elongata_contig609:4517..45891691679650.4950562-UTR-H-elongata_contig609:4517..4589Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 4518..4589 +
1622930983.6527479-UTR-H-elongata_contig609:5991..60631622930983.6527479-UTR-H-elongata_contig609:5991..6063Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 5992..6063 +
1691679650.5058398-UTR-H-elongata_contig609:5991..60631691679650.5058398-UTR-H-elongata_contig609:5991..6063Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 5992..6063 +
1622930983.6731737-UTR-H-elongata_contig609:6604..66761622930983.6731737-UTR-H-elongata_contig609:6604..6676Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 6605..6676 +
1691679650.5135574-UTR-H-elongata_contig609:6604..66761691679650.5135574-UTR-H-elongata_contig609:6604..6676Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 6605..6676 +
1622930983.685913-UTR-H-elongata_contig609:8401..84761622930983.685913-UTR-H-elongata_contig609:8401..8476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8402..8476 +
1691679650.5212224-UTR-H-elongata_contig609:8401..84761691679650.5212224-UTR-H-elongata_contig609:8401..8476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8402..8476 +
1622930983.7002463-UTR-H-elongata_contig609:8762..87831622930983.7002463-UTR-H-elongata_contig609:8762..8783Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8763..8783 +
1691679650.5289855-UTR-H-elongata_contig609:8762..87831691679650.5289855-UTR-H-elongata_contig609:8762..8783Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8763..8783 +
1622930983.7175994-UTR-H-elongata_contig609:8799..90031622930983.7175994-UTR-H-elongata_contig609:8799..9003Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8800..9003 +
1691679650.5452096-UTR-H-elongata_contig609:8799..90031691679650.5452096-UTR-H-elongata_contig609:8799..9003Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 8800..9003 +
1622930983.731489-UTR-H-elongata_contig609:9830..98341622930983.731489-UTR-H-elongata_contig609:9830..9834Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 9831..9834 +
1691679650.5562003-UTR-H-elongata_contig609:9830..98341691679650.5562003-UTR-H-elongata_contig609:9830..9834Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 9831..9834 +
1622930983.8389566-UTR-H-elongata_contig609:14146..153371622930983.8389566-UTR-H-elongata_contig609:14146..15337Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 14147..15337 +
1691679650.6262755-UTR-H-elongata_contig609:14146..153371691679650.6262755-UTR-H-elongata_contig609:14146..15337Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 14147..15337 +
1622930983.8608766-UTR-H-elongata_contig609:15533..157891622930983.8608766-UTR-H-elongata_contig609:15533..15789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 15534..15789 +
1691679650.6365685-UTR-H-elongata_contig609:15533..157891691679650.6365685-UTR-H-elongata_contig609:15533..15789Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig609 15534..15789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930983.7492576-CDS-H-elongata_contig609:9834..100741622930983.7492576-CDS-H-elongata_contig609:9834..10074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 9835..10074 +
1691679650.565411-CDS-H-elongata_contig609:9834..100741691679650.565411-CDS-H-elongata_contig609:9834..10074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 9835..10074 +
1622930983.772322-CDS-H-elongata_contig609:10313..109001622930983.772322-CDS-H-elongata_contig609:10313..10900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 10314..10900 +
1691679650.5772603-CDS-H-elongata_contig609:10313..109001691679650.5772603-CDS-H-elongata_contig609:10313..10900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 10314..10900 +
1622930983.7876456-CDS-H-elongata_contig609:11196..120611622930983.7876456-CDS-H-elongata_contig609:11196..12061Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 11197..12061 +
1691679650.5907388-CDS-H-elongata_contig609:11196..120611691679650.5907388-CDS-H-elongata_contig609:11196..12061Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 11197..12061 +
1622930983.8065474-CDS-H-elongata_contig609:12307..124401622930983.8065474-CDS-H-elongata_contig609:12307..12440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 12308..12440 +
1691679650.6078262-CDS-H-elongata_contig609:12307..124401691679650.6078262-CDS-H-elongata_contig609:12307..12440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 12308..12440 +
1622930983.8234735-CDS-H-elongata_contig609:13853..141461622930983.8234735-CDS-H-elongata_contig609:13853..14146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 13854..14146 +
1691679650.6175828-CDS-H-elongata_contig609:13853..141461691679650.6175828-CDS-H-elongata_contig609:13853..14146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig609 13854..14146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig609.13631.1

>prot_H-elongata_contig609.13631.1 ID=prot_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=706bp
MKSIVAGAGCPTEGTPEEVSTVGINLLRYILEGTAVEFYDCAGQVDYAGM
HQTFLTPRALYLLVWDVTRFRGVDSNDLRKVVHEDIMRWLYTLHLRAPGA
TVIMVANKCDRSMGDFSETTNRVDALVRQMLKDWQDRRGLNRHVVRNVEM
RLLEGASRVSCTDYGGIRELVRRISAQGATSIQMPPAWNLALKVIDALRD
GREPVRAVREHLQLVGTRLNDHEGANIVAQTFTTKAELFHVLENIMREVS
RDVKVTGQTAAGFNMTSALDGALWISEFAGQVLSIDSGDIIFLDVNWLSD
VLSPIMSHKLRREMFPSAALCKHRDSLVFDGVLRWEFAFHLWTPVLKKAV
PGSENRVIDALFRVLVKLGLILHLGRTAILGNDCVSSTSPGVSKSKDMLV
IMRLPETCSDAQREDLGSAIMEALYGCREVVFKWKFDAAGPPYGLVERLI
ASCHVIGVVEQGVCWRYGALFKSHAMTKRRGRGVRLYTFAIHYDVLYATD
GQPERVLTLRMVGPLENERVWAALRYVASAMVIISREWPGVLWEGWPVCL
KHPNSRMFLAPPAEAIINGPLLPEAAEPVPSGCDCTLEANGGLGLVLSRL
GKVIDTRKVDPFEKVKEPIKVRGCCRDAWIHFRPNAWRVTVALGTLSLTL
FCSATVPGITEENAMLWITSLSVVVFLLVAALPAVCVAYRYMVRNPPVSH
DALGA*
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mRNA from alignment at H-elongata_contig609:3103..15789+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig609.13631.1 ID=mRNA_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=12687bp|location=Sequence derived from alignment at H-elongata_contig609:3103..15789+ (Himanthalia elongata Himel1 dioecious)
GCATTTGGCGGCTTCGTGGGTTGTGCAGGTCCCATTCCATCCCAGCTCGG TCAACTGAATATCTTGAGAGACCTGGACCTTAGCTCCAACCAGCTGAGCG GTAAGTAGCTGCGAGAGTGGCCGTCTGATAAGATTGAGAAGGATTATTTC AGTGCTTCTTATGCAGTCCCACAACATTGAATGTGTGAGCGCGGTGTGCC TCGCTTCCCAGCGAGTAGATACAATATATGTTACACAAATACACGATTTA CCTACACTCATGAATATACTATTAATACTGGCTGAAACTCGCGCTGGAGA CGGCTAGTAGCTCTGTTTGCTCTCCTCGATGTTAGTTCGGAATGAAATAG GTAATTCCTTGCTTTGTTTCCCGTTGCTTGCAGCTTGTACACGACTTGCA TGGCTTGTAGATAATTGGGTGTCAACCGTCGTTGGTGAAAACCTATGCAC TGCAATTCTTGCTGACAACAGATAGGGAAATAGTTTCGAAGTAGATTTCT CATGCGGTTTTAAGGCTATTTCCGACAAAGATATTAAAAAAACGGGGATA GTCCTGAGCGTCTTGAGGGTCATTGCCCGTGGTTGCTCCGGCGGAAAGTA TAATATAGAATTAGCAAAGCTATCTATTCTTTTTCGCTTTAATAGTAACC GTCGATAGACACTTTGGGTCAGAATCCTGCGCATGCTGCAGACGACAAAT CACTGATCATTTAAAGACACACCTTCGTACAACCTTTACGCCTGGCACCT TCGTGGGCCGTGCAGGTGTCATTCCACCTCAGTTAGGCCAACTGGGCAAT TTGAAGCTTTTCAGACTGGGCTCCAATCGTCTGATAGGTGAGTTGGTAGA AGAATCCCCGCCTGGAATAGGTTTTAAATTTCATGGACGCTGTTGTCGTG CTTGTGCAGATTACCACGGACGTGTACAGTATGTATGGAAAGCACGTTCT TTTAAAGCACTGTCACGCACCACAAACACTTTCAGTTTCCGTACGAAATG AAAAATCCATTATAACCATCAAAGTAAAAAAATATCGTGTCCATTGCGCT AGGACGGCCTTCTCATACAGTGGCGACGTAAATAGCATTACTGCGCCAAT GGCGACAAGGATGGGTCATGGCTATCATGGTTCAGGGTAATATGAACCCG TCAGTAATCGTCAATAGAAATCCCGGGGTCAAGATTCGAGTGGGGAGAGC TATCCGGTAGCCGAAGGCAGGGCAAAACACCTCCAATATTGGTACTTCCG TCAGCCGGGAGATATTTGATCTATTAGCCAACACGCCTACATCGCCCAAC CGCTATGACGGCGATCATATGCCATCGTTTGGGACGCTTACTATTTCCTT TAAAGCTAAGCCAGCAATTATGAAACCATGCATGATGGCAATCGATTATT TCGTTGGGTGTGCAGGTGTCATTCCATCTACCCTAGGTCAGCTAAGCGCC TTAGAGGAACTGGATCTGAGCCACAACTCTCTAAGCGGTGAGGTGCTAAA AGGGAGATGATCGGAAATGTATCGATAAGCAATATTTTAGCGATGGTTTT GGTGTTCAATGAAGATGAGGGAAGGGTTCTTGACCACTTGAAAAAGGGCG ACTCTTCTATCGATATTAATTAAACACAGCATAGCACTAAAAGTGTACAG CTAGGTATCAATACTATTTATTTACCTTTCTGCCGATGTGGCCATATTAT AACAACGTGCTAGGTAACCAACTCCACCTACCTCAAAGATGCCAATTCCG CCTGAAATCCTAGGGTATCATCAACACAGCTTTCCTCGGTTCACGGCTGC ACCCTTTCATCTCGATGGGTATTCAGCACTTCTGGAAATTGGGAACCAAC TGCTGTGAAATGTTGTTAACTCACACAATATTGTTTCAGAAAGTTTCGAA CTTAAGACTCTTGTACAACATATTCTATACTATAATATCGTGCAGGTTTA CCGATTAAGTGAACTGTGGGCGCGGGTTTTTTTTAGAAGGGGGAAATTAT GTTTAGGTGGTGGGGAGGGTGGACTGTGAAAATGGCGGTATTATTAGGGG GAGACGATTTTGTGAGAAGTGATGTGCTCTGTAGAACTACTAGGCGTGAA TATTTCCCGAATGGTGGCATACTGGCGGTCTCGGCAGCCCGTGGTGATAG CATCTCGACAATATATGTCGTAGGACCCCACAGGCTAATAATATTTTAGT GTCTATAAATGCGGCGTGCATTTCTGAGCTGCAAAGCTCTCTGGAGAAAG GTCATGATTATGATAAACGGTGTCAGTGTTGCTGAAACATTAAGGAAACT TGTCCGTTGTTTGTGGCAGCTCAAACGCATCGCTTATACGTTATGTGGAG GTAGATTTTTTTTTAGCCGCTAGTTGTTGTATATTGACGGTTAGGATCCG GCAGCTAAGGCTGGTGCAAAATGTCTCCAAACTAGCTGCAAGCGGCGAAC CAGAGTATTATTTATCCCACGTACTATACCCGTCACCCGCGATAGCAGTG ATGACTTGCCTTTTAAATTTGGCTTCAAACTTCTTTGGGAGCGATATATT CCCTTGCAATCGCTCTGGAGGCTGGTCATGTTATGGTTCCCCCATTACCG TGCGTCGTTTGCATATAACGTATGTCAGTTATGGTTGGATAATGGGCTTT CTTGTTCATGCCATCGCCTGATGGTTATATGGGGGGATCATAACTTTACA ATCGTTGTTTGTTCGAAACGTACCTAAACGTGTCATGACCTCTAAACGAC ATATATAGATATTATCTAACTAGACGACACGAACATATTTCAATCATCAT GACAGCAATCAGACTCGTTGGTTTAAGAGGTTTGTGACATTGGCAACGAT GTGATTTCCTTGCATTCGGCGACTTCGTTCGTTGTCCAGGTCCCATTCCA TCCCAGCTCGGTCAGCTGAATATTTTGGAAGAACTGGACCTCAGCTCCAA CCAGCTGAGCGGTAAGGGACTGCGATAGTGGCCGTCTGACAACGTTAAGA AGGATTTTCTCAGTGCTTCTTCCGCCGTTCCACAACAATTAATGTGTGAG CACGGCGGGCCTTAAGACCTAAAGTCCAGGTTTCCCAGCGAGTAGATACA ATGCTCATTACACAAAAACGTGCTTTGCCTACACTCGTGGGATGTATTAC TGCGCTGAAAATCGCGCTGGGGATGGCTATTGATAGTACCTCTGTTCGCC GTCTTCGATGTTAGTTCGGAATCAAGTAGGTCATATCTTGTTTTGTTAGC CCGTTTTTAGTCGTAGCTAGCACACTATTCGAGTGACTTGTAGAAATAGG GGGACAACCGTCGTTACTTTTAAACTTATGTACTCCAATTCCTGCTGGCC ACACTTAAGGAACCAGTTTCGAACTAGATTTGGCGTACAGCCTCCCCTCG TGACGACGATCCATGAGATGCCCTGATATACCACGTTGACAATGCCATCA ATTTGATATCTTCGCCTGATTGGTTCATTTGGCAACCTAATATGGTGTGC AGGAGCCATTCCACCTGAGCTGGGTGGGCTAAGATATTTGTCTACACTAA ATCTAAGCTTTAACCACCTAAGCGGTAAGTCGGTGTACGGAGAGTCGAAT GAATAGCTGCGTTGAGCATCATGGTTTCTTTTTTGTTTGCCATGTCATCA AACACGAGACGACATACTCTACAGCACGGCTAAATATTATGGCGAACGCT TTGGCTTGTAGGGCTTTCAACGTCCAGTCCATTATACGGGACATGTAGCA GATTTTTGTACCGCGTGCTCTATAAGATACCCTGCGAATGCACTTCGTTC TAGGAAAATAACATATCTTGGAAAAAAATAATCGCCTTCTGTAGTTGCAG TTTTCTCCACAATTTGATTCGCCCTGTGTATTCGAGTGGTGTTTCTCAGG AGCAGTCGGTGAGCTAATGAAGTGGGAACTAGGTTATAGTTGCCCACAAC GAGGTTTGTGTCAGACACGATAGAACCAACCGGTATCATTTGCGAAATGT TCAATTCACCAGACCGTTTCATGAACACCGATCTCTCCCAGCGTAGATAA CTCATTGTTTTTGCGCTGCTGTAGGCATCTGCTATCTTTGGTCGTGTCGA CGGTGCGACAGATCATTTTTGTTCACGGTTGAACCAGTATCAATCAATGT AGTACACATTGTAGTACACATTCCCTATCCTTGTTTTACATTGGTACGAT TATGCCAGAAAAGTACAACAAATTAAGGACAACTGTAGTACTCTATGAAC AATATAACCGTGGTGCTATGTTTGTTATGTTACTTTGATTTTAATTGAAC TGATTGAATTCTCACATAAGCATATGTCAAAATCCAGCCTGTGGTCACAA GGTAGAAAAAACACACCAGCCGGAAAGAAGAAAAAACGTTCAAGGTACTC TCCAATACAAAAGGAAACGACAATAGAGGATTACAAATATTTTGCAGGCG TTCTAAGATCGCTTGTGATACAAATGTAGCATAGATACCAATGTACTACG ATTGCAAAATTTCATAGGATTGGTCCTCAAATTGTACGTTAGTTGAAGTA CAATTTCAGTGCAGCAGCAAAGCAAATTTTGCACTCGCATAGCCCAAAAT TAGAGATATAGAAATATACATTTTTATTTGTAGTACGAGAGCTCAAGTTA CCAACCAATCGAGCACATTGCCGTGAATCAGTGAATCATGAATACAGCCC TCCTCCAGCATACCGTTCGTGGGACTAGGGGAACACACGGTCGAGTTACG TATATTGGAGTGTAATACCCTGTCCCACTCAGTTTAGATCCATCATAAGC GACCTTTCTCTGCAGACCGCACGCACGTGAGTGCTGCTGCTGTTGGTGCC ACATGTTGTCTGGCAATCATGGTACCGTGAGAGCTGCCACCTCGGCTTGG TATGTTCATTTATCCTGCGTTGCGGACAGCGCATAATGTGGGTTCACCTC AATGCACTTCCGATGTTGGTTTGGGTGTATATGAGACCGTCCATGCTTGG GAGATACCAATGGGATGCACCGGCTAGGGCATATTGGTTTAAGTTTGGTA CTAAGCGGAGATGAATTTCCCCTGTTTTTTACCCTTCGGATAGCCATTGG GTTATGTTCGATCTATGCAAACTGTACTAAAAACTGACCACGGACGCAAA AGCTGCACTTGCGCAATAAACTTTGACGCACGCTTTGATCTCTTGCGTAT AGCACGATGTCCCTCAGAAAATATTTTACGCCGCCAAATTAAACGTGAAA ATCATGCTGCTCTCACGCATTCGTGTTGCGGCGGCCGCGCTCCGTGTAGG TGCCATACCAGCCGAGCAGCTTTGTATGATGAGTATTTTGAAGAAGCTGA GTGTTTGCTCAAATCAACTGACCGGTGAGGTCTCCACACAAGCACCCCCT CGAGCCTCGGCCATGTCGGCCAGTCGGTGGTGTGAGGGTGAAGACTTACG GGACGCAGTCCACGCGACTGCATTTGCTACAGAAACCACACGTTGAGTCC CTTTTCGAGGCCTATCGTGCGGCGCCGATTGCTCGCGAAGATGCCTATAG GAAATATAGCCTTGACTTTCCTTTGATTGCTGCATTCATCTGTGCTTTAC ACGAGGCTGACACGGTCTGGTATGTCGTCGTTTTGGCCCTCTTGTCGTCA TTGTTTCTAGATCTTGGTGACAGTGATTATGCACTACAACTGGTGGCGAA GTTAGAACCAAACTTGATTGCGTCGGACTTAGGAGGCAATCCCTGGAAAT TTCCCCCTGAGGCAGTGGTTGAACAAGGAATTGAGGCTGTCAATACATTC CTCTCGGACGTGCAAAACGCGAAGGCGGCGGGCGCCCCAGTCATATCCCT TCAAATTATCAAAGTGGTACTGGTGGGATCGGCGGCGGCGGGGAAAACCA GGTACTCTATTTTTGTCCTTGTTAGACAATGGCTTCGTATAAGCTCGAAT TTTAAGGCAGCACTATTGGGAAAGAGTTTGACGTTGTGCTCGCTAAAGCT CTCATACGCTCGCTCGTGTGGCCCTTCATCTACAGCGGGAGAGTATACCC ATCTTTCGTTAAATAAAGGATCTGCCACACCAAAGCTGTCCTTTTGAAAA TGCTTTGCGTACCACCCGGGCAGGTTAACGGCAGGGTAGGCGATGATAGG GTAGGCAATATTTTGAGCTTGTATGTACACACAGGGTGTGTGATCAAGTG CTTATTAGAAGTGATGCTGCGTGCGTATTCCCGACGCTTCTACGGGACCG ATAAAATACCTGACACATCTATGCTGATGGGAATTCTCACCTCATACAAC CACAATATATTATGCGTATTAAACCACGGCCCGTTGATACAAATTGTAGC AGGTGGTTTTTCATATTTCGAGGCTGGCGAAAGGGAAACACCAGCCAGTG TTTGAGCCACATTTATTTACCTAGTTTATCCATGCTGCTCGTAGCATCGA ATCACGCGCGTTTTGTTGCCCATTGATGATGCCTCCGTATTGATTACATT TCGTGTGTTGCACGTTTCTTGGGAGCATCCCAGCGTTTCACCATTCTTGG TATGGTGAATACTTTAAAAAACGATCCATGTGTATAGATCGTATTTTGCA TTCAGAGTGCGGTGGCCCACGGTAGTGACGTCTCACGTGGTTGACAGCTT TGGGCAAGATCTAAGCTTAGTTTGGCTAATGACCAACTGTCAGGTGAAAT GCTATTCGGCTTGTTTATTTTGTTGCAGTGTGATGAAAAGCATTGTCGCA GGCGCTGGCTGCCCGACGGAAGGGACCCCGGAGGAAGTGAGCACGGTAGG TATCAATCTTCTCCGCTATATACTGGAGGGGACAGCAGTTGAATTCTACG ACTGCGCGGGTCAAGTGGACTACGCTGGAATGCACCAGACGTTTCTGACC CCTCGAGCTCTGTACCTGCTCGTGTGGGACGTTACACGTTTTCGTGGTGT CGATAGCAACGACCTCAGGAAGGTGGGTAAAGTTATAGGCTCGAGGCGGA AATATCGATTATTTCTCGTTCGCACACGGCATCAAGACAGGTTTTTACTG CTAGACCTCATAGTAGTTTCCATACATTGGGTAAGAATCGTGCTCGAGGA ATGGGTGGTTTCGATTTGGTTTTCAAAAGAACCTTTGAAGCCTGCTGCGA GTGAACACTAACGAGACAATGAATTTCTTTGAAAATAATCGAATTGTGCT GGGAGGGGCAGGTCGTCCACGAGGACATCATGAGATGGTTGTACACACTC CACCTTCGGGCACCAGGAGCCACGGTGATAATGGTTGCCAACAAGTGCGA TAGGTCGATGGGCGATTTCTCAGAGACTACAAATCGAGTCGATGCACTTG TAAGACAAATGCTGAAAGATTGGCAGGACCGACGAGGCTTGAACCGTCAT GTAGTCCGAAATGTGGAGATGAGGCTGCTTGAGGGTGCAAGCCGAGTCAG CTGCACTGATTACGGTGGGATCAGGGAATTGGTTCGGCGTATTTCAGCAC AGGGTGCAACATCGATTCAGATGCCACCCGCGTGGAATCTAGCCCTCAAG GTGATTGATGCCCTACGGGACGGTCGTGAACCAGTACGGGCTGTCCGAGA GCATCTACAGCTGGTCGGGACAAGGCTGAACGATCATGAAGGAGCCAATA TTGTGGCACAGACCTTCACGACAAAGGCGGAACTGTTCCACGTTTTAGAA AACATCATGCGGGAAGTGTCACGCGACGTGAAAGTGACGGGGCAGACAGC AGCGGGTTTCAACATGACAAGTGCTCTTGATGGTGCCCTTTGGATCAGGT AGGGTATACGCTTTTGAATTTTATCACTTGACGATCAGGCTAATGTTTGT CATGCTGTTATTAATAGTGTATCATGTGACATGCGAAGAAGTATCTCTGG GGAAAAATATTCCTAGAACCTATTCTATTAATAGTAGTCATCTATTGGAA CCACGGTGCATATACGAGGAGCAGGATCAAATTAAAGTTGGTTGATAATA TGGGTATGCCGTGGCCAAGCGGTAAGACTTTGCTGATTTTGACACACGGC TTTTTAACCCACGTGTGCTTGATGTATCTGACGTGGTCTTCCAGTGAATT TGCAGGGCAAGTTTTAAGCATCGACAGTGGCGACATAATTTTCCTGGATG TAAACTGGCTCTCAGACGTTTTAAGCCCTATTATGAGCCACAAGCTGCGA AGAGAAATGTTCCCATCAGCGGCCCTCTGCAAGCATAGAGATAGCCTCGT CTTCGATGGTGTTCTCCGGTGGGAGTTCGCCTTCCACCTTTGGACGCCGG TCCTTAAGAAAGCGGTACCGGGGTCGGAAAACAGGGTGATCGATGCTCTG TTTCGCGTTCTAGTTAAGCTTGGTTTGATCCTTCATCTAGGCCGAACGGC AATTTTGGGCAATGACTGCGTGTCTTCCACGTCGCCTGGGGTCAGCAAGT CAAAAGACATGTTGGTAATCATGCGATTACCCGAGACATGCAGCGATGCG CAACGAGAAGATCTTGGTTCGGCGATCATGGAGGCATTATACGGCTGTCG GGAGGTAGTATTCAAGTGGAAATTTGACGCGGCGGGGCCCCCCTATGGAC TGGTGGAGCGGTTGATAGCTTCGTGTCATGTCATTGGCGTTGTAGAGCAG GGTGTGTGCTGGAGGTACGGGGCTTTGTTTAAGAGCCATGCGATGACGAA GAGACGCGGAAGAGGTGTCCGATTGTACACATTCGCCATTCACTACGACG TGCTCTACGCCACTGACGGTCAACCGGAGCGCGTGCTGACTTTGAGGATG GTTGGCCCCCTCGAAAACGAAAGAGTGTGGGCTGCACTCCGATACGTGGC GTCGGCGATGGTTATCATTTCAAGGGAATGGCCTGGTGTGCTGTGGGAGG GCTGGCCGGTGTGTTTGAAGCATCCGAATTCCCGCATGTTCTTGGCGCCT CCAGCAGAGGTGCTTACATGAAAGGCTTGCTGGTAAATGTTACGTATATT GCCAAAACATATTAACATACGCTCTTCGCAATGCACGAATTTATTCCCCA TTTGCCTGAATGACTAGAGCTTAGTGGTACATGTGACCTGCGTTTTCAAA ACAATTTTACCGACTCTCTTCGTAATGCACGCCCTTCTGCCCCACTTGTT TAAATTATTTCACTTATGGCCTCATTTATTGTTTCTTGACATTGAACGCA CACAGGCAATAATCAACGGTCCATTACTACCCGAAGCAGCTGAACCTGTT CCGAGTGGGTGTGACTGTACACTGGAGGCGAATGGAGGGCTTGGCCTAGT TCTCAGTCGTCTTGGCAAGGTGATCGACACGAGAAAAGGTGTGGAAGTTA ATAGCGCTCATGATACTGTCATGTAGCTAGTATTTCTGTGTCTCAGAGAA ATGTGTGTTTTTTTGTCGCCCGCAACTTCTGAAGACGATTATTCACATCT GTATCATAATGTGTTTAAGTAGGATCGAACCGTGGGGTCGATTGTCTTAA ACATACTTGAACAATAATCAATCACGTTGACTCTGATCGCACAATACGAC TATGTGTATGTGTGTGTATATTTATTAAATTGCACATTACCGCGCAATCT GGCTCTGTCATACTAGTTCTTCTAGGCTACTCTCGTATTGATCCTCCCAA TGGGGGATTCAATCATATTTGTTACACAACCCTCTGATCAGACGTGTGCG TGTATGTGTGTATATTTACAAAAATTATACATAACCGCGCAATTCGACTG TTATGCTAGCTTTCCTAGGTCACTCTCGCATTGATTCTCCCAATGGGGGA TACAATCATTATTTGTGTGCATTTATTAAATTGTACACAACCGCGCAATC CGGCTCTGTCATGCTAGCTCTTCTAGGCTACTCTGGCATTGATCCTTCCA ATGGGGGATTGAATCATATTTGCTACAAACGTGTGTGTGTGTGTGTGTGC TTGTGTGTGCGTGTGTATATTTATGATAATGCAAATAACCGCGCAATCTG GCTCTGTCATGTAAGTCCTTCTAGGCTACTCTCGCATTGATACTCCTAAA ATCAGACGTGACAACAGAGGAAAACTATCTCTACAATTCGTATATAAGCC ATCAACACCTTGCGCTTCCTTTTATACTTCCTTGTTCGCCATATAGCTTC GGTCGGCCCCTATTGGACCAACGTCTGTGTGTATATTTATTAAATTGCGC ATAACTGCGCAATCCGGCCCTGTCATGCTATAATAGTCCTTCTAGACTAC TTTCACATTGATTTTTCCCATGGGGGGCTCAATCAAATTTGCTACAAAAG CATCTGATCCGACGTGACTGTTTGTGGGTGTATCATTATAGTGTGTGTAT GTGTATTTGTTAAATTGCACATAACCGCACAAATCGGCCCTGTCATGCTA GTTCGTCTAGGCTACACGCATTGCTTTTGAGTGTGTGTAGTCATCATTTA TAGCAGAGTGTGGATCAACTGGAAATGGTTGCCAATCCTGCTAGTGCTGA ACTGAACAGGTCAATCCAACGTCTTCAAGGATAGGCGGACGCCTCATTAC TGTCATGCCGTTTTGCGCGGTCTAATAGAAATTAATAAAAATGGGAAATA TTTTTCCCCATCCCCATTCATGCCTGCATATTAGGTAGCGTGAGACGGGT TCGGCCGCCTCGACCCGCATGAACTCGCTCTTTGTACCCAGGCTGAACCT GGTATTGATATCCAACCATCGTACCCTTTTCTCTCTCACCGCTTTTCTTA GTTGATCCGTTCGAGAAAGTCAAGGAGCCCATTAAGGTGCGTGGCTGCTG CCGCGACGCCTGGATTCACTTCAGACCGAACGCCTGGCGAGTGACCGTAG CTCTCGGGACGCTGTCGCTAACCCTTTTTTGCTCAGCTACGGTCCCGGGT ATCACCGAGGAGAACGCTATGCTGTGGATAACTTCGTTATCGGTGGTTGT ATTCTTGCTTGTAGCGGCTCTACCCGCTGTATGTGTCGCTTACCGATATA TGGTTAGAAATCCGCCTGTGTCCCACGATGCTTTGGGGGCTTAGTTGGGA CGCTGCGGTCACCATTTTTTTAGAGTGACCCCCGTTGTGCTGTCGAAGAC AAGGGTAGATTTAAAATATATTTTTGTCTGGCGAGAAGTTTGGCATTGAT AAGACGTTCATGTTTTTATTTATCGTAGGTTGCCCGCAGCCTCCTTCATA TGTGTCCGTTGCTGCTACATGTAATTCTTGTCGCGTGGGGTTATATCCCC TTGGCTCCATTTGCCCGTTACTTCGGTGCGTTAGACTCGATGGATCCCTC CGCTTACCTAGGCTATGTGACTATCTCCATCCGTTGACCTTTTATAGCTG CATCTCCCTGATAGCTATCGTTATCATGGCGTTATTTTAGACCATTCTTT GTTAAGCTCTGGGCATCGTCGGATTTATACCGCTCTCCCGGTGGTATGTT TTACCGTAGAAGTAGCATGTCCAGTCTATACTACGGTATGTCGTTCGTTT GCGTTTTAATCGTGTATTTTCCCTTTTTATGTGGCTTGAAAAATTTGCTG CACGTTGGTTAAAAGTGTTGTATTTTCCCCCTGGAGGCAAAAGGGTCTTC GCAGCCGAGTGTTGGCGGAGGCAGCCTCAATTCGGGTCGAATCCTGGTTT TCTGCACTACGAATTTAGCAGCGTAGAGTCGGACGATCGAGTATGTTGCT TCTATTCAAATACATAGAAGTGGGATTTGTGCATGTACCTAATTTGATTT CACCGGATTGGCCGGGATAACACCCTTCTCTGTAAAATAAATTTCTTGTG CTGCCACGGCATCTGATATTTTCCTCTCACTTGAGGTATTGAGGGGTATT TGCATCTTTTGCTAGAGAGTTTCGTGCATTTATTTCCGGGGGTAGAGAGA GATGCACAATACGATGCCAGCGGCCAAACGTAGAGTGTATAATACCTTCT TATTATATAGCACTTGCTTTACTCGGTCAATAGCCTACAGCCGAAATATC TATATAATTAACGAATGTTCTAAGTGTACCAACGACACGCTACTCAGAGG TGCCGGATTGCTGAAAACTTAGTCGCTTGAGGGGTGGTGTTGCACTCCGA GCTGGTCGTCCAGCAACGCTTAGAAAAACATTTCCTCGAAATAGACAAGT GTTGGATTGCCGTCTGTCATTATATTTTTTATTCTGGTTTTCGAAAGTCT AATCGAATGCATTTCAACAACACGACGCCATTTCCTCAGTAGTCTTATTG AATGTATTTCACCAACGCGACACCTTTTCTCTCCGGAGATTTTGTTTTAG AGTCACGAGTACGACCAATATACCGAGGAGCTCTAAGCACATTCATCGTT TCGGAGAAGCTCAGTGGTAAAAAGGTTTTGAAGTACTACATGAGAATATA GGTGGAAGTATCCAGGTGGAAGTCTTCACTGAAATAACTATTGTTAAACA GACTCGAAGAATGCGCACATTTAGCAACTCGATTTTGTTCAGGTTCCTTT GTGGCTAGGGAGAATAAAGTCAAACAAAATAACTATAAGCAGGGATATTT GCCATGTAATATTTAGTGAAAATTATAGGGTGTTAGTTGGCTTAAACCTA TTATTTATATTTATAGGTAAAGGCTGCCCACACGAGGGGCTATATATGGC ATTTCGATTGGAAAGGGATTAGTAGCAATAATCAAAG
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Coding sequence (CDS) from alignment at H-elongata_contig609:3103..15789+

>mRNA_H-elongata_contig609.13631.1 ID=mRNA_H-elongata_contig609.13631.1|Name=mRNA_H-elongata_contig609.13631.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4236bp|location=Sequence derived from alignment at H-elongata_contig609:3103..15789+ (Himanthalia elongata Himel1 dioecious)
ATGAAAAGCATTGTCGCAGGCGCTGGCTGCCCGACGGAAGGGACCCCGGA
GGAAGTGAGCACGGTAGGTATCAATCTTCTCCGCTATATACTGGAGGGGA
CAGCAGTTGAATTCTACGACTGCGCGGGTCAAGTGGACTACGCTGGAATG
CACCAGACGTTTCTGACCCCTCGAGCTCTGTACCTGCTCGTGTGGGACGT
TACACGTTTTCGTGGTGTCGATAGCAACGACCTCAGGAAGATGAAAAGCA
TTGTCGCAGGCGCTGGCTGCCCGACGGAAGGGACCCCGGAGGAAGTGAGC
ACGGTAGGTATCAATCTTCTCCGCTATATACTGGAGGGGACAGCAGTTGA
ATTCTACGACTGCGCGGGTCAAGTGGACTACGCTGGAATGCACCAGACGT
TTCTGACCCCTCGAGCTCTGTACCTGCTCGTGTGGGACGTTACACGTTTT
CGTGGTGTCGATAGCAACGACCTCAGGAAGGTCGTCCACGAGGACATCAT
GAGATGGTTGTACACACTCCACCTTCGGGCACCAGGAGCCACGGTGATAA
TGGTTGCCAACAAGTGCGATAGGTCGATGGGCGATTTCTCAGAGACTACA
AATCGAGTCGATGCACTTGTAAGACAAATGCTGAAAGATTGGCAGGACCG
ACGAGGCTTGAACCGTCATGTAGTCCGAAATGTGGAGATGAGGCTGCTTG
AGGGTGCAAGCCGAGTCAGCTGCACTGATTACGGTGGGATCAGGGAATTG
GTTCGGCGTATTTCAGCACAGGGTGCAACATCGATTCAGATGCCACCCGC
GTGGAATCTAGCCCTCAAGGTGATTGATGCCCTACGGGACGGTCGTGAAC
CAGTACGGGCTGTCCGAGAGCATCTACAGCTGGTCGGGACAAGGCTGAAC
GATCATGAAGGAGCCAATATTGTGGCACAGACCTTCACGACAAAGGCGGA
ACTGTTCCACGTTTTAGAAAACATCATGCGGGAAGTGTCACGCGACGTGA
AAGTGACGGGGCAGACAGCAGCGGGTTTCAACATGACAAGTGCTCTTGAT
GGTGCCCTTTGGATCAGGTCGTCCACGAGGACATCATGAGATGGTTGTAC
ACACTCCACCTTCGGGCACCAGGAGCCACGGTGATAATGGTTGCCAACAA
GTGCGATAGGTCGATGGGCGATTTCTCAGAGACTACAAATCGAGTCGATG
CACTTGTAAGACAAATGCTGAAAGATTGGCAGGACCGACGAGGCTTGAAC
CGTCATGTAGTCCGAAATGTGGAGATGAGGCTGCTTGAGGGTGCAAGCCG
AGTCAGCTGCACTGATTACGGTGGGATCAGGGAATTGGTTCGGCGTATTT
CAGCACAGGGTGCAACATCGATTCAGATGCCACCCGCGTGGAATCTAGCC
CTCAAGGTGATTGATGCCCTACGGGACGGTCGTGAACCAGTACGGGCTGT
CCGAGAGCATCTACAGCTGGTCGGGACAAGGCTGAACGATCATGAAGGAG
CCAATATTGTGGCACAGACCTTCACGACAAAGGCGGAACTGTTCCACGTT
TTAGAAAACATCATGCGGGAAGTGTCACGCGACGTGAAAGTGACGGGGCA
GACAGCAGCGGGTTTCAACATGACAAGTGCTCTTGATGGTGCCCTTTGGA
TCAGTGAATTTGCAGGGCAAGTTTTAAGCATCGACAGTGGCGACATAATT
TTCCTGGATGTAAACTGGCTCTCAGACGTTTTAAGCCCTATTATGAGCCA
CAAGCTGCGAAGAGAAATGTTCCCATCAGCGGCCCTCTGCAAGCATAGAG
ATAGCCTCGTCTTCGATGGTGTTCTCCGGTGGGAGTTCGCCTTCCACCTT
TGGACGCCGGTCCTTAAGAAAGCGGTACCGGGGTCGGAAAACAGGGTGAT
CGATGCTCTGTTTCGCGTTCTAGTTAAGCTTGGTTTGATCCTTCATCTAG
GCCGAACGGCAATTTTGGGCAATGACTGCGTGTCTTCCACGTCGCCTGGG
GTCAGCAAGTCAAAAGACATGTTGGTAATCATGCGATTACCCGAGACATG
CAGCGATGCGCAACGAGAAGATCTTGGTTCGGCGATCATGGAGGCATTAT
ACGGCTGTCGGGAGGTAGTATTCAAGTGGAAATTTGACGCGGCGGGGCCC
CCCTATGGACTGGTGGAGCGGTTGATAGCTTCGTGTCATGTCATTGGCGT
TGTAGAGCAGGGTGTGTGCTGGAGGTACGGGGCTTTGTTTAAGAGCCATG
CGATGACGAAGAGACGCGGAAGAGGTGTCCGATTGTACACATTCGCCATT
CACTACGACGTGCTCTACGCCACTGACGGTCAACCGGAGCGCGTGCTGAC
TTTGAGGATGGTTGGCCCCCTCGAAAACGAAAGAGTGTGGGCTGCACTCC
GATACGTGGCGTCGGCGATGGTTATCATTTCAAGGGAATGGCCTGGTGTG
CTGTGGGAGGGCTGGCCGGTGTGTTTGAAGCATCCGAATTCCCGCATGTT
CTTGGCGCCTCCAGCAGAGTGAATTTGCAGGGCAAGTTTTAAGCATCGAC
AGTGGCGACATAATTTTCCTGGATGTAAACTGGCTCTCAGACGTTTTAAG
CCCTATTATGAGCCACAAGCTGCGAAGAGAAATGTTCCCATCAGCGGCCC
TCTGCAAGCATAGAGATAGCCTCGTCTTCGATGGTGTTCTCCGGTGGGAG
TTCGCCTTCCACCTTTGGACGCCGGTCCTTAAGAAAGCGGTACCGGGGTC
GGAAAACAGGGTGATCGATGCTCTGTTTCGCGTTCTAGTTAAGCTTGGTT
TGATCCTTCATCTAGGCCGAACGGCAATTTTGGGCAATGACTGCGTGTCT
TCCACGTCGCCTGGGGTCAGCAAGTCAAAAGACATGTTGGTAATCATGCG
ATTACCCGAGACATGCAGCGATGCGCAACGAGAAGATCTTGGTTCGGCGA
TCATGGAGGCATTATACGGCTGTCGGGAGGTAGTATTCAAGTGGAAATTT
GACGCGGCGGGGCCCCCCTATGGACTGGTGGAGCGGTTGATAGCTTCGTG
TCATGTCATTGGCGTTGTAGAGCAGGGTGTGTGCTGGAGGTACGGGGCTT
TGTTTAAGAGCCATGCGATGACGAAGAGACGCGGAAGAGGTGTCCGATTG
TACACATTCGCCATTCACTACGACGTGCTCTACGCCACTGACGGTCAACC
GGAGCGCGTGCTGACTTTGAGGATGGTTGGCCCCCTCGAAAACGAAAGAG
TGTGGGCTGCACTCCGATACGTGGCGTCGGCGATGGTTATCATTTCAAGG
GAATGGCCTGGTGTGCTGTGGGAGGGCTGGCCGGTGTGTTTGAAGCATCC
GAATTCCCGCATGTTCTTGGCGCCTCCAGCAGAGGCAATAATCAACGGTC
CATTACTACCCGAAGCAGCTGAACCTGTTCCGAGTGGGTGTGACTGTACA
CTGGAGGCGAATGGAGGGCTTGGCCTAGTTCTCAGTCGTCTTGGCAAGGT
GATCGACACGAGAAAAGGCAATAATCAACGGTCCATTACTACCCGAAGCA
GCTGAACCTGTTCCGAGTGGGTGTGACTGTACACTGGAGGCGAATGGAGG
GCTTGGCCTAGTTCTCAGTCGTCTTGGCAAGGTGATCGACACGAGAAAAG
TTGATCCGTTCGAGAAAGTCAAGGAGCCCATTAAGGTGCGTGGCTGCTGC
CGCGACGCCTGGATTCACTTCAGACCGAACGCCTGGCGAGTGACCGTAGC
TCTCGGGACGCTGTCGCTAACCCTTTTTTGCTCAGCTACGGTCCCGGGTA
TCACCGAGGAGAACGCTATGCTGTGGATAACTTCGTTATCGGTGGTTGTA
TTCTTGCTTGTAGCGGCTCTACCCGCTGTATGTGTCGCTTACCGATATAT
GGTTAGAAATCCGCCTGTGTCCCACGATGCTTTGGGGGCTTAGTTGATCC
GTTCGAGAAAGTCAAGGAGCCCATTAAGGTGCGTGGCTGCTGCCGCGACG
CCTGGATTCACTTCAGACCGAACGCCTGGCGAGTGACCGTAGCTCTCGGG
ACGCTGTCGCTAACCCTTTTTTGCTCAGCTACGGTCCCGGGTATCACCGA
GGAGAACGCTATGCTGTGGATAACTTCGTTATCGGTGGTTGTATTCTTGC
TTGTAGCGGCTCTACCCGCTGTATGTGTCGCTTACCGATATATGGTTAGA
AATCCGCCTGTGTCCCACGATGCTTTGGGGGCTTAG
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