mRNA_H-elongata_contig60837.13622.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A6H5JA44_9PHAE (SAC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA44_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.820e-72 Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 1
Query: 7 RDADTTEATLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
R T +ATLEPVVSKLERFVLYET+SHLY+TASD+ ET YRVLK+DRRVV+P SLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGG+ TAKG+GIVGFV+FLDCYYLNFITQRRLVGAIGGNLVYAIK+TEMFAI
Sbjct: 5 RKQSTAKATLEPVVSKLERFVLYETSSHLYLTASDRSETTYRVLKLDRRVVNPTSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGLSMTAKGYGIVGFVRFLDCYYLNFITQRRLVGAIGGNLVYAIKATEMFAI 142
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A835YSI4_9STRA (SacI homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI4_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.830e-50 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 25 EATLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
E TLEPVVSKLERFVLYET H+Y+ DK+++QYRVLK+DR V P +L+DI EDP Y M+EMLDMIHEGNR GG+ + A +GIVGFV+FLDCYYL +TQRR VGAIGGNLVYA+K+TE F I
Sbjct: 64 ETTLEPVVSKLERFVLYETQPHMYLVGCDKLQSQYRVLKMDRSVTHPTALSDIVTEDPTPYGARAMVEMLDMIHEGNRASGGLAKVAVAYGIVGFVRFLDCYYLCLVTQRRRVGAIGGNLVYAVKATETFPI 195
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A7S3YA14_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA14_HETAK) HSP 1 Score: 165 bits (417), Expect = 1.270e-48 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 31 TLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
T+EPVVSKLE FVLYE+ SH+++ D+ TQYRVLK DR V P SL DI ED Y+ ++ EMLDMIHEGN+ VGG+R A+G+G++G V+FLDCYY+N ITQRR VG +GGN++YA+ TE F +
Sbjct: 71 TIEPVVSKLENFVLYESYSHMFLVGCDQYNTQYRVLKFDRWVSRPTSLQDILVEDTNTYSRAEIFEMLDMIHEGNKQVGGLRTVARGYGLIGLVRFLDCYYINLITQRRKVGKLGGNVLYAVAGTETFPV 200
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A7S2RBS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBS4_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.730e-43 Identity = 74/142 (52.11%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 31 TLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMS------------LADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
TLEPVV+KL++F+LYET S+LY+ DK +T YRVLKIDR + LAD+ ED VY ++ +ML+M+HEGN+ GG+ + A G+GI+GFV+FL C+YL FITQRR VG+IGGN +Y IK+TEM+ I
Sbjct: 27 TLEPVVAKLDKFILYETPSYLYVVGGDKQQTSYRVLKIDRSSAVAATSAGSGGSDAKPRLADLLSEDECVYNRQELKDMLEMVHEGNKLQGGLVRVATGYGILGFVRFLGCFYLCFITQRRKVGSIGGNNIYGIKATEMYPI 168
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: F0Y2V1_AURAN (SAC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V1_AURAN) HSP 1 Score: 148 bits (374), Expect = 3.350e-39 Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 1
Query: 37 EPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVD-PMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
EP S LE+FVLY+T SHLYI DK + YRVLKI R L D+ ED Y+ +++ EML+MIHEGNRT GG+ + A G+G++GF +FLDCYY+ +TQRR VG IGGN VY IK+TEM AI
Sbjct: 7 EPTCSGLEKFVLYQTMSHLYIVGCDKRQASYRVLKILRAAAGGDCKLGDVATEDSCAYSKVELKEMLEMIHEGNRTHGGLSRVATGYGLLGFARFLDCYYVILVTQRRKVGQIGGNAVYGIKATEMIAI 135
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A8J2SN27_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN27_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.010e-34 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1
Query: 37 EPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
EP + LE+FV+YET HLY+ D+ + +YRVLK+ RR SL D+ QED Y+ ++ ++L+M HEGN+ GG+R+ A G+GI+GFV+FLDCYY ITQRR VG IGG +Y IK+TE+ I
Sbjct: 6 EPTCAGLEKFVIYETQQHLYVVGCDRQQLKYRVLKVLRRSAP--SLIDLAQEDASSYSKDELRDVLEMAHEGNKQGGGLRRVATGYGILGFVRFLDCYYCVLITQRRKVGRIGGAPIYGIKATELIPI 131
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A482UV05_9ARCH (SAC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UV05_9ARCH) HSP 1 Score: 124 bits (312), Expect = 4.750e-33 Identity = 56/109 (51.38%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 94 YITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
Y+ +++ET +R++KI+R + P LA+I +EDPV+Y+P ++ ++LDMIHEGN+T GG+ + A GIVGFVKFL+ YYL ITQ++ VG + GN +Y IK+TEMF I
Sbjct: 3 YLVGFNELETAFRLIKINRTIPYPKELAEILREDPVIYSPKEIGDILDMIHEGNKTSGGLVKIATAVGIVGFVKFLNGYYLTLITQKKEVGCVAGNFIYTIKATEMFPI 111
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A1E7FKZ4_9STRA (Syja_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKZ4_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.510e-28 Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 37 EPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDP--------MSLADICQEDPVVYTPIDMIEMLDMIHEGNRT----------------------VGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
+P + KLER+ L+ T Y+ +K +QYRV+K+DR +++ +L++ EDP VY+ ++ EMLDMIH+GNR ++ AK +GIVGF+KFLDCYYL IT+R VG+IGGN +Y IK+TE F I
Sbjct: 1 DPYIGKLERYELFCTNQSYYLVGCNKQNSQYRVIKMDRTLIERPGLNSNLHKNLSEFLTEDPNVYSQTEIQEMLDMIHDGNRLRREDHRPVSVEDGXXXXXXXXXXXXLKPIAKAYGIVGFIKFLDCYYLTLITRRAKVGSIGGNGIYTIKNTETFPI 158
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: UPI000B8C79A8 (phosphoinositide phosphatase SAC1-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C79A8) HSP 1 Score: 110 bits (275), Expect = 7.950e-28 Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 25 EATLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
E+ ++P E+F LYET + Y+ SD+ + +RVLKIDR ++++ EDPVVY+P ++ +L I EGNR GG+ AK FGI G +KFL+ YYL +T+RR +G I G+ +YAI +++ I
Sbjct: 22 ESEVDPNSYSFEKFRLYETRARFYLVGSDRNKRYFRVLKIDRSEPSDLNIS----EDPVVYSPQEIKNLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGCICGHAIYAIDESQLITI 149
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Match: A0A137PHE0_CONC2 (SAC domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PHE0_CONC2) HSP 1 Score: 116 bits (290), Expect = 1.840e-27 Identity = 57/140 (40.71%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 1 NMRDADTTEATLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRVVDPMSLADICQEDPVVYTPIDMIEMLDMIHEGNRTVGGMRQTAKGFGIVGFVKFLDCYYLNFITQRRLVGAIGGNLVYAIKSTEMFAI 420
N+ D+ T + ++SK F LYET + YI S++ + YR+LKIDR +D +++ ED VVYT + IE+L MI +GN GG+++ GFGI+GF+KF YY+N IT+R + IGG+ +Y I+ T + I
Sbjct: 20 NIHDSTPTHPNTQLILSK---FTLYETKTRFYIVGSNQSDNYYRILKIDRTSIDELNIT----EDEVVYTKSECIELLSMIDQGNLQAGGLQKVCSGFGIIGFIKFTQGYYINLITKRTAIALIGGHYIYHIEDTALLPI 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60837.13622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60837.13622.1 >prot_H-elongata_contig60837.13622.1 ID=prot_H-elongata_contig60837.13622.1|Name=mRNA_H-elongata_contig60837.13622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MRDADTTEATLEPVVSKLERFVLYETTSHLYITASDKMETQYRVLKIDRRback to top mRNA from alignment at H-elongata_contig60837:811..1334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60837.13622.1 ID=mRNA_H-elongata_contig60837.13622.1|Name=mRNA_H-elongata_contig60837.13622.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=524bp|location=Sequence derived from alignment at H-elongata_contig60837:811..1334- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60837:811..1334- >mRNA_H-elongata_contig60837.13622.1 ID=mRNA_H-elongata_contig60837.13622.1|Name=mRNA_H-elongata_contig60837.13622.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig60837:811..1334- (Himanthalia elongata Himel1 dioecious)back to top |