prot_H-elongata_contig60817.13619.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig60817.13619.1
Unique Name	prot_H-elongata_contig60817.13619.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	137

Homology

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A6H5KT04_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT04_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 6.300e-64
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S +LGFLAAGV LGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSV R++AMKRD FG+GLATFG++AAAVAG  YLAGLTGAQM+VIGGGVALSSSAFVLQLL+DRDD+GTRYGRACFGILLFQ
Sbjct:  363 SPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGMSAAAVAGACYLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 489

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: D8LS49_ECTSI (Similarity to sodium/hydrogen exchanger and potassium exchanger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS49_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 7.780e-62
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S +LGFLAAGV LGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSV R++AMKRD FG+GLATFGV+AAAVAG  Y+AGLTGAQM+VIGGGVALSSSAFVLQLL+DRDD+GTRYGRACFGILLFQ
Sbjct:  331 SPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGACYVAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 457

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A835Z5B4_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 9.520e-48
Identity = 92/127 (72.44%), Postives = 105/127 (82.68%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLA G +LGPN L +++DVKA EVLGE+GIVFFLFEMGLELS+QR+ AMK+D FG+GLA F +TA  VA V   AGL    ++VIGGG+ALSSSAFVLQLLKDRDDMGTRYGRA FGILL Q
Sbjct:   16 SPILGFLATGTLLGPNGLRLIADVKATEVLGELGIVFFLFEMGLELSIQRLAAMKKDVFGLGLAQFFLTALGVAAVASRAGLGAPALVVIGGGIALSSSAFVLQLLKDRDDMGTRYGRASFGILLLQ 142

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A4D9D2S5_9STRA (Na_H_Exchanger domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.010e-43
Identity = 77/127 (60.63%), Postives = 101/127 (79.53%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFL  G+VLGP  LS+V+D+K  E L E+GIVFFLFEMGLELSV+R+++M+RD FG+G A F ++A A+  +  + GL G   +V+GG +ALSSSAFVLQLL+D+D +GTR+GRA FG+LLFQ
Sbjct:   71 SPILGFLLTGMVLGPRGLSVVNDIKTTEALAELGIVFFLFEMGLELSVERLISMRRDVFGLGFAQFSLSAVAIFILSRMRGLPGPTSVVVGGALALSSSAFVLQLLRDKDSLGTRHGRASFGVLLFQ 197

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A7S2A6S9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6S9_TRICV)

HSP 1 Score: 152 bits (383), Expect = 3.570e-43
Identity = 81/128 (63.28%), Postives = 101/128 (78.91%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLA-GLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLAAG +LGPN L  +S +   E L E+GIVFFLFEMG+ELS +R+L+MK+D FG+GL+ F  TA AVA VG +A GL    ++V+GGG+ALSSSAFVLQLLKD+D + TR+GRA FG+LLFQ
Sbjct:  126 SPILGFLAAGTILGPNALGWISGIHTTETLAELGIVFFLFEMGIELSFERLLSMKKDVFGLGLSQFLTTAVAVAAVGRVAFGLPANALVVLGGGLALSSSAFVLQLLKDKDQLATRFGRASFGVLLFQ 253

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A7S3L4P7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4P7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 6.510e-42
Identity = 80/127 (62.99%), Postives = 103/127 (81.10%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLA+G++LGPN   ++S +   E L E+GIVFFLFEMG+ELSV+R++ M++D FG+GL  FG+TA AVAG G L GL G  ++V+GGG+ALSSSAFVLQLLKD+D + TR+G+A FGILLFQ
Sbjct:  254 SPILGFLASGMLLGPNGCGLISGIHTTETLAELGIVFFLFEMGIELSVERLMQMRKDVFGLGLGQFGLTALAVAGFGSLFGLPGNALVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGILLFQ 380

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A7S2MX89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MX89_9STRA)

HSP 1 Score: 152 bits (383), Expect = 7.110e-42
Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLAAG++LGPN   ++S +   E L E+GIVFFLFEMG+ELS  R+L+MK+D FG+GL+ F  TA  + GVG L GL G   +V+GGG+ALSSSAFVLQLLKD+D + TR+G+A FG+LLFQ
Sbjct:  239 SPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFNRLLSMKKDVFGLGLSQFLTTAITIGGVGRLCGLPGNAGVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQ 365

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A7S4VUL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUL3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.250e-41
Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLAAG++LGPN   ++S +   E L E+GIVFFLFEMG+ELS  R+++MK+D FG+GL+ F  TA AV GVG   GL G   +V+GGG+ALSSSAFVLQLLKD+D + TR+G+A FG+LLFQ
Sbjct:  242 SPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFDRLISMKKDVFGLGLSQFITTAIAVGGVGKFCGLPGNACVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQ 368

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A7S0Y7X8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7X8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 8.920e-41
Identity = 76/127 (59.84%), Postives = 104/127 (81.89%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLA+G++LGPN   +++D+   EVL E+GIVFFLFEMG+ELS++R+ +MKRD FG+GL+ F  +A A+AGVG + GL    ++V+GGG+ALSSSAFVLQLLKD++ + TR+G+A FG+LLFQ
Sbjct:    5 SPILGFLASGMLLGPNGFGLIADIHTTEVLAELGIVFFLFEMGIELSIERLTSMKRDVFGLGLSQFLASAIAIAGVGKVVGLPANAVVVLGGGLALSSSAFVLQLLKDKNQLATRFGKASFGVLLFQ 131

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BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Match: A0A1E7FVM6_9STRA (Na_H_Exchanger-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVM6_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.930e-40
Identity = 79/127 (62.20%), Postives = 101/127 (79.53%), Query Frame = 0

Query:    1 SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQRMLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSAFVLQLLKDRDDMGTRYGRACFGILLFQ 127
            S ILGFLA+G++LGPN   ++  + A E L E+GIVFFLFEMGLELSV R+L+MKRD FG+GL+ F  +A A+AGVG +  L    ++VIGGG+ALSSSAFVLQLLKD++ M TR+G+A FG+LLFQ
Sbjct:   39 SPILGFLASGMLLGPNGFGLIGGIHATETLAELGIVFFLFEMGLELSVARLLSMKRDVFGLGLSQFLCSALAIAGVGKILKLPANALVVIGGGLALSSSAFVLQLLKDKNQMATRFGKASFGVLLFQ 165

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot

BLAST of mRNA_H-elongata_contig60817.13619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KT04_9PHAE	6.300e-64	88.19	Na_H_Exchanger domain-containing protein n=1 Tax=E...	[more]
D8LS49_ECTSI	7.780e-62	88.19	Similarity to sodium/hydrogen exchanger and potass...	[more]
A0A835Z5B4_9STRA	9.520e-48	72.44	Sodium/hydrogen exchanger family-domain-containing...	[more]
A0A4D9D2S5_9STRA	2.010e-43	60.63	Na_H_Exchanger domain-containing protein n=1 Tax=N...	[more]
A0A7S2A6S9_TRICV	3.570e-43	63.28	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S3L4P7_9STRA	6.510e-42	62.99	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S2MX89_9STRA	7.110e-42	61.42	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A7S4VUL3_9STRA	2.250e-41	61.42	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S0Y7X8_9STRA	8.920e-41	59.84	Hypothetical protein n=1 Tax=Pseudo-nitzschia deli...	[more]
A0A1E7FVM6_9STRA	2.930e-40	62.20	Na_H_Exchanger-domain-containing protein (Fragment...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 1..128 e-value: 6.9E-29 score: 102.8
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 2..127 e-value: 9.2E-21 score: 74.1
None	No IPR available	PANTHER	PTHR46157	FAMILY NOT NAMED	coord: 1..127
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 82..86
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..48
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..81
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 87..106
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 107..136
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..28
None	No IPR available	TMHMM	TMhelix		coord: 26..48
None	No IPR available	TMHMM	TMhelix		coord: 87..106
None	No IPR available	TMHMM	TMhelix		coord: 60..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig60817	contig	H-elongata_contig60817:1742..3069 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig60817.13619.1	mRNA_H-elongata_contig60817.13619.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig60817 1742..3069 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig60817.13619.1 ID=prot_H-elongata_contig60817.13619.1|Name=mRNA_H-elongata_contig60817.13619.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
SSILGFLAAGVVLGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVQR
MLAMKRDTFGMGLATFGVTAAAVAGVGYLAGLTGAQMIVIGGGVALSSSA
FVLQLLKDRDDMGTRYGRACFGILLFQVRRARGGER*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038770	Na+/solute_symporter_sf
IPR006153	Cation/H_exchanger