prot_H-elongata_contig60790.13617.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60790.13617.1
Unique Nameprot_H-elongata_contig60790.13617.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
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BLAST of mRNA_H-elongata_contig60790.13617.1 vs. uniprot
Match: D7FJW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW8_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 7.220e-80
Identity = 128/171 (74.85%), Postives = 144/171 (84.21%), Query Frame = 0 
Query:    1 MGVTCESMSLKLLTGQARLVEALAGMYMKSVIFFADEGRGEFSIPGAPQQAFLPYERALYSAGMRDGDVVTLVDGLPATQGTLAKLGVKAHSQCNQPCVACVRLTFLRPIGASPTIPLASPQSVIDRWRELVRIIVLDSVPESQRKKEVLEQLERLQDASTLRTLACHSFE 171
            +GVTCE+MSL+LLT Q+RLVEALAGMYMKS +F ADEG GE S+PGAPQ AFLP ERALY+AGMRDGDVVTLVDGLPATQ TL  LG KAHS CN+PCVA VRLTFLRP G S  +P  SPQSV+D WRE VR+IVL+SVPES RK EV+ +L RLQDA+TLR LAC +FE
Sbjct:   13 VGVTCETMSLQLLTAQSRLVEALAGMYMKSTMFRADEGLGELSLPGAPQ-AFLPVERALYAAGMRDGDVVTLVDGLPATQETLGALGDKAHSNCNEPCVASVRLTFLRPCGTS--VPPRSPQSVLDLWREHVRVIVLNSVPESNRKHEVMLELSRLQDATTLRALACQAFE 180
[Close]
BLAST of mRNA_H-elongata_contig60790.13617.1 vs. uniprot
Match: A0A6H5JPZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPZ0_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.430e-58
Identity = 109/159 (68.55%), Postives = 122/159 (76.73%), Query Frame = 0 
Query:    1 MGVTCESMSLKLLTGQARLVEALAGMYMKSVIFFADEGRGEFSIPGAPQQAFLPYERALYSAGMRDGDVVTLVDGLPATQGTLAKLGVKAHSQC-----------------NQPCVACVRLTFLRPIGASPTIPLASPQSVIDRWRELVRIIVLDSVPE 142
            +GVTCE+MSL+LLT Q+RLVEALAGMYMKS +F ADEG GE S+PGAPQ AFLP ERALY+AGMRDGDVVTLVDGLPATQ TL  LG KAHS+C                 N+PCVA VRLTFLRP G S  +P  SPQSV+D WRE VR+IVL+SVPE
Sbjct:  311 VGVTCETMSLQLLTAQSRLVEALAGMYMKSTMFRADEGLGELSLPGAPQ-AFLPVERALYAAGMRDGDVVTLVDGLPATQDTLGALGDKAHSKCRKLFTAWSPPPPFPSPQNEPCVASVRLTFLRPCGTS--VPPRSPQSVLDLWREHVRVIVLNSVPE 466
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60790.13617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJW8_ECTSI7.220e-8074.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPZ0_9PHAE1.430e-5868.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60790contigH-elongata_contig60790:1117..2842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60790.13617.1mRNA_H-elongata_contig60790.13617.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60790 1117..2854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60790.13617.1 ID=prot_H-elongata_contig60790.13617.1|Name=mRNA_H-elongata_contig60790.13617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MGVTCESMSLKLLTGQARLVEALAGMYMKSVIFFADEGRGEFSIPGAPQQ
AFLPYERALYSAGMRDGDVVTLVDGLPATQGTLAKLGVKAHSQCNQPCVA
CVRLTFLRPIGASPTIPLASPQSVIDRWRELVRIIVLDSVPESQRKKEVL
EQLERLQDASTLRTLACHSFE
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