mRNA_H-elongata_contig60760.13614.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: D8LHX2_ECTSI (Serine/threonine protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX2_ECTSI) HSP 1 Score: 290 bits (743), Expect = 9.050e-89 Identity = 176/367 (47.96%), Postives = 205/367 (55.86%), Query Frame = 1
Query: 1 GFPLGVRHIFGIFDGHGGDSVAEFCRSQLIDGIVKRLGERHSSSRVKRTCYNGST----------------EDTHEY------------------------GPLDIADCVRNMSREVDARAKGKFFTPTGRYVVPSVYDPLDVTPPPKEEKDDENGTGITSGMLIHNWHRSLKCYIESRASPFINRYCPCFCCPSSE-----------GRRKSKSPEAYDG------------TIDAD--ELSISTCGTT-SIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G PLGVRHIF +FDGHGGDSVAE+CR+ L D IV+R+ E + + T +T E +E+ P A CVR+ REVDA KG FFTP GRYV P V DPLD +P K T +SG ++ +E R R PS++ G RK E G T DAD STCGTT S+IVV++DAFI+CCN GDSRAVLASEG S+ LS+DH+PDN ER+RIEAAGG V+H RV+G LAVSRCIGDH FKSDP LPLERQMVVCDPEVTV RSDEDEF+VMACDGVWDVM
Sbjct: 77 GCPLGVRHIFCLFDGHGGDSVAEYCRTYLADRIVQRIREAQALATTSATTTEAATIAQSAQARVPANGAGKEGINEHPGGGGGGRTFGDGERGSDGGTATAAPYMAAGCVRDACREVDAEVKGTFFTPAGRYVAPRVDDPLDPSP-----KQQPTRTSSSSGGFGEGADQARPMSMEERRLEKAKRK------PSTQANKSPARDGDAGARKENGGETNAGFAGGWGDGSGNATDDADGGPTRFSTCGTTTSLIVVVSDAFIICCNTGDSRAVLASEGASRQLSVDHKPDNRAERQRIEAAGGKVEHNRVEGKLAVSRCIGDHPFKSDPNLPLERQMVVCDPEVTVIKRSDEDEFVVMACDGVWDVM 432
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A024UCH5_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCH5_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.400e-34 Identity = 65/119 (54.62%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 547 GTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G T+I +TD FIV N+GDSR+VLA++G P+S DH+P+N ER+RIE AGG+V++ RV+G LAVSR +GD +K P LP Q V +P+V V R+ EDEFL++ACDG+WDVM
Sbjct: 120 GCTAIAAFVTDLFIVVANSGDSRSVLATDGGVIPMSYDHKPNNTGERQRIENAGGSVRNNRVNGDLAVSRALGDFIYKQRPDLPAAAQQVSAEPDVKVAERTKEDEFLLLACDGIWDVM 238
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.910e-34 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 547 GTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G T+I VIT + IVC +AGDSR ++ + G + LS DH+PD ER RIE+AGG V +RVDG LAV+R +GD +K P LP++RQ V C P+V T RS DE LV+ACDG+WDVM
Sbjct: 126 GCTAICAVITPSHIVCASAGDSRGIMVTSGQVRALSEDHKPDGAIERERIESAGGCVSMRRVDGDLAVARALGDFQYKDRPDLPVDRQKVTCVPDVRTTPRSSGDEVLVLACDGIWDVM 244
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A507CA16_9FUNG (PPM-type phosphatase domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CA16_9FUNG) HSP 1 Score: 136 bits (343), Expect = 3.100e-34 Identity = 64/120 (53.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 547 GTTSIIVVITD-AFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G T++ ++TD ++C NAGDSRAVL+ +GV++P+S DH+P NP+E RRI AAGG V+ RV+G LA+SR IGD FK P+LP E Q+V +PE+ +++DEFLV+ACDG+WD M
Sbjct: 126 GCTAVCAILTDDGKVICGNAGDSRAVLSVKGVAEPMSYDHKPVNPEESRRIVAAGGFVEFGRVNGNLALSRAIGDFDFKQSPQLPAEDQIVTVNPEIITRQMTEDDEFLVLACDGIWDCM 245
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A6G0WXM2_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXM2_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.230e-33 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 547 GTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G T+I VITD I+ N+GDSR+VLAS+G P+S DH+P+N ER+RIE AGG+V++ RV+G LAVSR +GD +K L E Q V +PE+ V +R+ +DEFL++ACDG+WDVM
Sbjct: 120 GCTAIAAVITDTHIIVSNSGDSRSVLASDGGVVPMSFDHKPNNLPERKRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRGDLKAEEQQVSAEPEIVVHSRTKDDEFLILACDGIWDVM 238
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A812LQD7_SYMPI (Ptc2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812LQD7_SYMPI) HSP 1 Score: 135 bits (341), Expect = 3.720e-33 Identity = 103/321 (32.09%), Postives = 146/321 (45.48%), Query Frame = 1
Query: 1 GFPLGVRHIFGIFDGHGGDSVAEFCRSQLIDGIVKRL------GERHSSSRVKRTCYNG--STEDT-----HEYGPLDIADCVRNMSREVDARAKGKFFTPTGRYVVPSVYDPLDVTPPPKEEKDDENGTGITSGMLIHNWHRSLKCYIESRASPFINRYCPCFCCPSSEGRRKSKSPEAYDGTIDADELSISTCGTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVK--------HKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDV 900
G L +FG+FDGHGG VA FC+ L D I ++L G R S + + + +D HE L + VR ++ + A E++D + G+ S L+ N +S + S + R +SK+P AD + G T++ V+++D IVC NAGDSRAVL G LS DH+P+ ER RIEAAGG ++ H RV+G L +SR IGD +K P L ERQM+ P++ A + ED+F+ +ACDGVWDV
Sbjct: 47 GDELDELSLFGVFDGHGGAEVAAFCKQHLPDEIRRQLRKRLADGARLSGDVLGEALISAFHAMDDMLRSPEHERQLLALKQAVRPSAKGIGAAXXXXXXXXXXXXXXXXXXXXX------XEKEDGKKPRGVLS--LLSNSIQSTLEQARDKGSLSREEAKQVMMKMALLRRLESKAPSLSSDAAAADNV-----GCTAVCVLLSDTEIVCANAGDSRAVLCRGGSPVELSHDHKPNEAGERERIEAAGGRIEEIPVGARVHYRVNGNLNLSRSIGDLEYKKQPALGHERQMICSTPDIVKMALNKEDDFIALACDGVWDV 354
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A0N5A867_9BILA (PPM-type phosphatase domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5A867_9BILA) HSP 1 Score: 133 bits (334), Expect = 5.370e-33 Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 547 GTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G+T+++V+I D I C N GDSRAV++ GV+KPLS+DH+P N ER+RI AAGG V+ RV+G LA+SR +GD FK+D E Q++ P+VTV +D+ EFL++ACDG+WDVM
Sbjct: 116 GSTAVVVIIKDNKIYCGNVGDSRAVVSVRGVAKPLSLDHKPVNANERQRIYAAGGYVELNRVNGNLALSRALGDFSFKTDLDRSAEEQIITAYPDVTVEKLTDDHEFLILACDGIWDVM 234
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A7S3W7P7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W7P7_9SPIT) HSP 1 Score: 127 bits (319), Expect = 5.910e-33 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 547 GTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVKHKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDVM 903
G T+ + +IT I+C N+GDSR VL+ +G + +S DH+PDN ER RI++AGG V+ RV G L++SR +GD +K LP E+QM+ C PE+ AR D+DEFL++ACDG+WD +
Sbjct: 13 GCTACVAMITKDEIICANSGDSRCVLSRKGSAIEMSEDHKPDNAGERSRIQSAGGFVEEGRVKGVLSLSRALGDLEYKMSSHLPEEKQMITCVPEMRKQARKDDDEFLIIACDGIWDCL 131
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A812UGV4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UGV4_9DINO) HSP 1 Score: 133 bits (334), Expect = 6.210e-33 Identity = 99/319 (31.03%), Postives = 147/319 (46.08%), Query Frame = 1
Query: 1 GFPLGVRHIFGIFDGHGGDSVAEFCRSQLIDGIVKRLGERHSSS---------RVKRTCYNGSTE----DTHEYGPLDIADCVRNMSREVDARAKGKFFTPTGRYVVPSVYDPLDVTPPPKEEKDD-ENGTGITSGMLIHNWHRSLKCYIESRASPFINRYCPCFCCPSSEGRRKSKSPEAYDGTIDADELSISTCGTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVK--------HKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGV 891
G L +FG+FDGHGG VA FC+ L D + ++L +R + + ++ E HE L + R ++ + + EEKDD + G+ S L+ N +S + S + R +SK+P ++ AD + G T++ V+++D IVC NAGDSRAVL EG + LS DH+P+ +ER RIEAAGG ++ H RV+G L +SR IGD +K P + ERQM+ P++ S ED+F+V+ACDGV
Sbjct: 19 GEELDGLSLFGVFDGHGGAEVAAFCKQYLPDEVRRQLRKRLADGARLSGDVLGEALISSFHAMDEMLRSPEHERQLLALKQAARPSAKGIGGASSSXXXXXXXXXXXXXXXX---------EEKDDGKKPRGVLS--LLSNSIQSTLAQARDKGSLSREEAKQVMMKMALLRRLESKAP-----SLSADPAAADNVGCTAVCVLLSDTEIVCANAGDSRAVLCREGQAVELSQDHKPNEARERERIEAAGGRIEEIPVGARVHYRVNGNLNLSRSIGDLEYKKQPTMGHERQMICSTPDIVKMPLSKEDDFIVIACDGV 321
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Match: A0A812RQN1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812RQN1_9DINO) HSP 1 Score: 134 bits (337), Expect = 6.430e-33 Identity = 100/322 (31.06%), Postives = 145/322 (45.03%), Query Frame = 1
Query: 1 GFPLGVRHIFGIFDGHGGDSVAEFCRSQLIDGIVKRLGERHSSS---------RVKRTCYNGSTE----DTHEYGPLDIADCVRNMSREVDARAKGKFFTPTGRYVVPSVYDPLDVTPPPKEEKDD-ENGTGITSGMLIHNWHRSLKCYIESRASPFINRYCPCFCCPSSEGRRKSKSPEAYDGTIDADELSISTCGTTSIIVVITDAFIVCCNAGDSRAVLASEGVSKPLSIDHRPDNPQERRRIEAAGGTVK--------HKRVDGCLAVSRCIGDHHFKSDPKLPLERQMVVCDPEVTVTARSDEDEFLVMACDGVWDV 900
G L +FG+FDGHGG VA FC+ L D + ++L +R + V + ++ + HE L + R S+ + + EEKD+ + G+ S L+ N +S + S + R +SK+P AD + G T++ V++ D+ IVC NAGDSRAVL LS DH+P+ ER RIEAAGG ++ H RV+G L +SR IGD +K P L ERQM+ P++ S ED+F+++ACDGVWDV
Sbjct: 39 GDELDELSLFGVFDGHGGAEVAAFCKQFLPDEVRRQLRKRLADGARLSGDVLGEVLISSFHAMDDMLRSPEHERQLLALKQVARTTSKGIGGASSSSXXXXXXXXXXXXXXX--------XEEKDEGKKPHGVLS--LLSNSIQSTLAQARDKGSLSREEAKQVMMKMALLRRLESKAPSLSPDAAAADNV-----GCTAVCVLLNDSEIVCANAGDSRAVLCRASNPVELSQDHKPNEAGERERIEAAGGRIEEIPVGARVHYRVNGNLNLSRSIGDFEYKKQPSLGHERQMICSTPDIVKMPLSKEDDFVILACDGVWDV 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60760.13614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60760.13614.1 >prot_H-elongata_contig60760.13614.1 ID=prot_H-elongata_contig60760.13614.1|Name=mRNA_H-elongata_contig60760.13614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp GFPLGVRHIFGIFDGHGGDSVAEFCRSQLIDGIVKRLGERHSSSRVKRTCback to top mRNA from alignment at H-elongata_contig60760:1118..3604+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60760.13614.1 ID=mRNA_H-elongata_contig60760.13614.1|Name=mRNA_H-elongata_contig60760.13614.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2487bp|location=Sequence derived from alignment at H-elongata_contig60760:1118..3604+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60760:1118..3604+ >mRNA_H-elongata_contig60760.13614.1 ID=mRNA_H-elongata_contig60760.13614.1|Name=mRNA_H-elongata_contig60760.13614.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig60760:1118..3604+ (Himanthalia elongata Himel1 dioecious)back to top |