mRNA_H-elongata_contig117407.1361.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.260e-23 Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALKNTWGVVEEWQRS 225
+PLD WR +++PLLAALAR +LAIP+SQAQSERVFS+AG T TR+RL ENVELLV L+N WGVV+EW++S
Sbjct: 482 NPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 1.650e-22 Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALKNTWGVVEEWQRS 225
DPLDWWR+ FP LA LAR +LAIPA+QA+SER+FS AG I T+ RN L+ VELLV L+++W +VEEW++S
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A2G9RVU8_LITCT (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RVU8_LITCT) HSP 1 Score: 79.3 bits (194), Expect = 2.320e-16 Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALK 189
DPL WW+ N K+P +A +ARC LA+P S SERVFS+AG I T TR+ LS +NV++LV LK
Sbjct: 153 DPLTWWKSNECKYPHIATMARCYLAVPGSSVPSERVFSTAGDIVTATRSTLSPDNVDILVFLK 215
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME) HSP 1 Score: 75.1 bits (183), Expect = 4.500e-16 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVAL 186
D +DWW+ N +FP+LAA+AR LAIPA+Q SER+FS AG I T TR++L ENVE L L
Sbjct: 16 DIIDWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 7.230e-16 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 4 PLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALKNT 195
PL+WWR+ ++P LA+LAR +L IPA QAQSERVFSSAG + T+TR R+ ENV L+V L+NT
Sbjct: 480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 76.6 bits (187), Expect = 9.300e-16 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 7 LDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELL 177
+ WW+ N V+FPLLAA+AR LLAIPA+Q SER+FS+AG I + R+RL SENVE+L
Sbjct: 104 ISWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSRLCSENVEML 160
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 1.970e-15 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 37 FPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALKNTWGVVEEWQRS 225
FP LA LAR +LAIPA+QA+SER+FS AG I T+ RN L+ VELLV L+++W +VEEW++S
Sbjct: 154 FPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: A0A3N0YQ94_ANAGA (Zinc finger BED domain-containing protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YQ94_ANAGA) HSP 1 Score: 77.8 bits (190), Expect = 2.870e-15 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALKNTWGVV 207
DPL WW+ N K+P +A +ARC LA+P S SERVFS+AG I T R+ LS +NV++LV LK + ++
Sbjct: 95 DPLTWWKSNECKYPHIAKMARCYLAVPGSSVPSERVFSTAGDIVTAKRSTLSLDNVDILVFLKKIFEII 163
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: UPI0020143E0A (zinc finger BED domain-containing protein 4-like n=4 Tax=Euteleostomi TaxID=117571 RepID=UPI0020143E0A) HSP 1 Score: 76.6 bits (187), Expect = 9.970e-15 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVALK 189
DPL WW+ N K+P +A +ARC LA+P S SERVFS+AG I T R+ LS +NV++LV LK
Sbjct: 270 DPLTWWKSNECKYPHIAKMARCYLAVPGSSVPSERVFSTAGDIVTAKRSTLSPDNVDILVFLK 332
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 70.5 bits (171), Expect = 2.260e-14 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRLSSENVELLVAL 186
DPL WW+ + +P++AAL + LAI AS A SERVFS+AG I T RN LS+ENV LL+ L
Sbjct: 1 DPLKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFL 62 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117407.1361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig117407.1361.1 >prot_H-elongata_contig117407.1361.1 ID=prot_H-elongata_contig117407.1361.1|Name=mRNA_H-elongata_contig117407.1361.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp DPLDWWRLNTVKFPLLAALARCLLAIPASQAQSERVFSSAGQIFTQTRNRback to top mRNA from alignment at H-elongata_contig117407:450..692+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig117407.1361.1 ID=mRNA_H-elongata_contig117407.1361.1|Name=mRNA_H-elongata_contig117407.1361.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=243bp|location=Sequence derived from alignment at H-elongata_contig117407:450..692+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig117407:450..692+ >mRNA_H-elongata_contig117407.1361.1 ID=mRNA_H-elongata_contig117407.1361.1|Name=mRNA_H-elongata_contig117407.1361.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at H-elongata_contig117407:450..692+ (Himanthalia elongata Himel1 dioecious)back to top |