mRNA_H-elongata_contig60682.13608.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: D7G5U6_ECTSI (FGGY_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U6_ECTSI) HSP 1 Score: 277 bits (708), Expect = 2.420e-87 Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLIS--ELSPEEEARAVVEGRFLSMRAHAKELGVGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMECRTRGVPYVSFREIYG 537
GNTMYHPCDP AWF MLVYKNGSLTREAVRDRRAGGSWD FS LL G PGN G+LGLFLDLFEITPQINRQG+F VD DR + ELS EEE RAVVEGRFLSM+AHA+ELGV +P R+LATGGGS N E L LADVFQAPVFTAAASDSAA+GAALRAKHG+E RGVPYV F E+YG
Sbjct: 374 GNTMYHPCDPAAWFVMLVYKNGSLTREAVRDRRAGGSWDVFSRLLRDGRPGNGGKLGLFLDLFEITPQINRQGNFVVDAEDRQSAQGELSAEEEVRAVVEGRFLSMKAHARELGVAKPERVLATGGGSNNAELLQVLADVFQAPVFTAAASDSAAVGAALRAKHGVEGLRRGVPYVPFAEVYG 556
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: W7T5Q4_9STRA (Xylulose kinase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5Q4_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.100e-45 Identity = 93/168 (55.36%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELGVGR-PSRILATGGGSKNPEA--LLADVFQAPVFTAAASDSAAIGAALRAKHGMECR 495
G+ M P P WFAML YKNG+L REAVRDR AGG W +F L+A PGN G L + L + EI P + +GSF VD D ++ LS EARAVVE RFLSMR HA LG+ PSRI+ATGGGS + +LADVF APV A +S++AA+GAALRA HG++C+
Sbjct: 334 GHVMVSPRGPDEWFAMLCYKNGALAREAVRDRVAGGCWKKFDDLVASAPPGNDGNLAMTLVMEEIVPVLPIRGSFRVDAQDEPVAALSEAHEARAVVEARFLSMRVHAGNLGLPTAPSRIIATGGGSMSTSLTQVLADVFNAPVLVADSSEAAAVGAALRAGHGLKCK 501
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A6H5KR75_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR75_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.940e-42 Identity = 87/167 (52.10%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISE-LSPEEEARAVVEGRFLSMRAHAKELGVGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMEC 492
G+ M +P + ++FAMLVYKNG+L+RE VRD GSW +LA PGN G +GLF+D+ EITPQI G F D ++ E P EARAVVE RFLSMR + +G+ RP+ +LATGGG+ +P + LADVF APV D+AAIGAALRAKHG C
Sbjct: 365 GHIMANPVEESSYFAMLVYKNGALSRERVRDELCSGSWGELDKILASTSPGNGGHIGLFVDMPEITPQIATTGRFRRGPEDEVVDEAFPPGVEARAVVESRFLSMRGRMQRMGIPRPTAVLATGGGTNSPSMMQVLADVFSAPVLLRTVPDAAAIGAALRAKHGYLC 531
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A836CEA2_9STRA (Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA2_9STRA) HSP 1 Score: 156 bits (394), Expect = 8.930e-41 Identity = 90/175 (51.43%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGN--DRLISE---LSPEEEARAVVEGRFLSMRAHAKELGVGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMECRTRG 504
G+ M DP A FAMLVYKNG +TR+ +RD AGG W F LLAG PGN G +GLFLDL EITPQ+ R G FF +++E LS ARA+VEGRFLSMRA +G+G R+LA GG S + + LADVF +PV+ A D+A +GAALRAKHG+ + G
Sbjct: 301 GHVMVSALDPAASFAMLVYKNGGVTRQRMRDEHAGGDWAAFEELLAGSPPGNDGVMGLFLDLPEITPQVERVGRFFASAAAPSSILTETTSLSAATFARALVEGRFLSMRARLTRMGIGPAQRVLAMGGASASAAMMQVLADVFASPVYVGAVPDAAVVGAALRAKHGVLSQRAG 475
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A0S7HGZ0_9TELE (XYLB (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HGZ0_9TELE) HSP 1 Score: 145 bits (367), Expect = 2.670e-40 Identity = 85/166 (51.20%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELG--VGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGM 486
G+ P +P + A+L +KNGSLTRE VR+R GSWD FS L G GN G +G + D EITP G D NDR +S SPE E RA+VEG+FLS R HA+ LG +G SR+LATGG S N + L L+DVF APV+T SDSA +G+A RA HG+
Sbjct: 36 GHVFRSPVEPDGFMALLCFKNGSLTRERVRNRCCSGSWDVFSQALDGTPLGNHGNIGFYFDTMEITPPA--VGLHRFDANDRQVSSWSPELEVRALVEGQFLSRRLHAERLGYSIGSGSRVLATGGASANRQILQVLSDVFNAPVYTIDLSDSACLGSAYRALHGL 199
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A7X7J8S5_9BACT (Carbohydrate kinase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7J8S5_9BACT) HSP 1 Score: 152 bits (383), Expect = 3.190e-40 Identity = 88/178 (49.44%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELGVGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMECRTRGVPYVSFRE 528
G+ P DP + A++ YKNGSLTRE VRDR AGGSW +F LA +PGNRGR+G + E+TP + R G + D R I + E+ARAV+EG+FLSMR H + +G+ P +ILATGG S N L +ADVF APV+T+ +SA++GAA RA HG +C R YV F E
Sbjct: 323 GHIFGSPIDPEGYMALIGYKNGSLTREWVRDRFAGGSWPQFERCLAETQPGNRGRIGFYYREPEMTPPVFRTGVWRFDCRGRPIRRFNEGEDARAVIEGQFLSMRLHGRNIGLA-PRKILATGGASVNRSILKTMADVFGAPVYTSCRPNSASLGAAYRALHGWDC-ARKKRYVPFME 498
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A7C5EKG9_9BACT (Carbohydrate kinase n=2 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5EKG9_9BACT) HSP 1 Score: 150 bits (380), Expect = 8.720e-40 Identity = 86/180 (47.78%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELGVGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMECRTRG--VPYVSFRE 528
G+ +P DP A+ AML KNGSLTRE VRD A GSWD F+ L PGN G +G ++ EITP I + G + DG R + P E RAVVEG+FL+MR HA+++G+ +ILATGG S N L +ADVF PV+ A ++SAA+GAA RA HG C +G VP+ + E
Sbjct: 321 GHIFVNPVDPEAYMAMLCIKNGSLTREYVRDMAASGSWDEFNRKLESTPPGNNGNIGFYIREPEITPPILKTGIYRFDGAGRSVEAFDPAAETRAVVEGQFLAMRLHARKIGISA-EKILATGGASSNRSILKVMADVFGVPVYVAEQANSAALGAACRAFHGWLCAMKGSFVPFAAAME 499
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: H2YXB8_CIOSA (Xylulose kinase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YXB8_CIOSA) HSP 1 Score: 150 bits (378), Expect = 1.300e-39 Identity = 80/167 (47.90%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELG--VGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGME 489
G+ +P + A+ A+L +KNGSLTRE RD + GSW +FS L G G+LG++ D+ EITP + QG + D ND++++ SP EE R+++EG+FL+ R HA++LG +G SR+LATGG S N E L L+DVFQAPV+T S+SA +G A RAKHG++
Sbjct: 313 GHIFINPVEDDAYMALLCFKNGSLTRERFRDEYSSGSWAKFSEQLQSSVAGINGKLGIYFDVMEITPAV--QGQYRFDANDKMVASFSPAEEVRSLIEGQFLAKRYHAEKLGYRLGPESRVLATGGASSNKEILQVLSDVFQAPVYTLDTSNSACLGCAYRAKHGVK 477
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A3B5KYU5_9TELE (Xylulokinase homolog (H. influenzae) n=1 Tax=Xiphophorus couchianus TaxID=32473 RepID=A0A3B5KYU5_9TELE) HSP 1 Score: 143 bits (361), Expect = 7.660e-39 Identity = 85/166 (51.20%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQGSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELG--VGRPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGM 486
G+ P +P + A+L +KNGSLTRE VRDR GSWD FS L G GN G +G + D EITP G D NDR ++SPE E RA+VEG+FLS R HA+ LG +G SR+LATGG S N + L L+DVF APV+T SDSA +G+A RA HG+
Sbjct: 100 GHVFCSPVEPDGFMALLCFKNGSLTRERVRDRCCSGSWDVFSQALDGTPLGNHGNIGFYFDTMEITPPA--VGLHHFDANDR---QVSPELEVRALVEGQFLSRRLHAERLGYSIGSASRVLATGGASANRQILQVLSDVFNAPVYTIDLSDSACLGSAYRALHGL 260
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Match: A0A813D3V9_9DINO (Xylb protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813D3V9_9DINO) HSP 1 Score: 142 bits (357), Expect = 8.450e-39 Identity = 82/182 (45.05%), Postives = 111/182 (60.99%), Query Frame = 1
Query: 1 GNTMYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRGRLGLFLDLFEITPQINRQ-GSFFVDGNDRLISELSPEEEARAVVEGRFLSMRAHAKELGVG--RPSRILATGGGSKNPEAL--LADVFQAPVFTAAASDSAAIGAALRAKHGMECRTRGVPYVSFREI 531
G + +P DP ++ MLV+KNGSL RE V GG W+ ++ +LA +PGN G +G + EITP Q G F DG ++ + +P E RAVVEG+FL+MRA A+ +G+ RI+ATGG S N L LADVF PVFT SDSA++GAALRA HG+ C + ++SF +
Sbjct: 20 GMVLRNPVDPNSYMGMLVFKNGSLAREQVLKTVCGGQWETWAKMLAETQPGNGGSIGFYFHSPEITPTTGDQSGIFRFDGEEKEVGSFAPSTEVRAVVEGKFLAMRAFAQGIGMDPTEVKRIIATGGASSNKAILQVLADVFGVPVFTLDQSDSASLGAALRAGHGLRCLSSEGGFLSFAKF 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60682.13608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60682.13608.1 >prot_H-elongata_contig60682.13608.1 ID=prot_H-elongata_contig60682.13608.1|Name=mRNA_H-elongata_contig60682.13608.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp MYHPCDPRAWFAMLVYKNGSLTREAVRDRRAGGSWDRFSGLLAGGEPGNRback to top mRNA from alignment at H-elongata_contig60682:840..3414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60682.13608.1 ID=mRNA_H-elongata_contig60682.13608.1|Name=mRNA_H-elongata_contig60682.13608.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2575bp|location=Sequence derived from alignment at H-elongata_contig60682:840..3414+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60682:840..3414+ >mRNA_H-elongata_contig60682.13608.1 ID=mRNA_H-elongata_contig60682.13608.1|Name=mRNA_H-elongata_contig60682.13608.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig60682:840..3414+ (Himanthalia elongata Himel1 dioecious)back to top |