prot_H-elongata_contig60652.13606.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60652.13606.1
Unique Nameprot_H-elongata_contig60652.13606.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A4Y9ZWQ0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZWQ0_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 3.080e-18
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAGGKA-LSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR ART+   QH YI ++  RF +     + +       LS + SP T AE+ +MR ++YRE VGALM+A+  TR DIS     L++F  + GP HW   ++  +Y
Sbjct:  110 RDREARTIHLSQHSYIDSILRRFNLEDAKPVSTPMETHLRLSTAQSPSTTAEYAQMRDVLYREAVGALMYASLATRPDISYAVLVLSRFATNAGPAHWEAVKRVFRY 216          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 85.1 bits (209), Expect = 3.430e-17
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTK-TSIIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            R+R  R L   Q   + T+ ++F +    S+   A  G  LS + SPQTD E EEM+QI Y+E VGAL++ +T TR DIS    Q+AKFN +PG  HW+  ++  +Y
Sbjct:  220 RNRERRHLSISQPDAVDTILKKFKMGDCNSVSTPAEPGLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRY 326          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 85.1 bits (209), Expect = 4.620e-17
Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVT--KTSIIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            R+R  R L   Q QYI    E FG+T  K +  P       LSKS SPQT  E EEM +I Y   VG+L++ ATMTR DI+  A  LA+FN +PG  HW+  +  L+Y
Sbjct:  326 RNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPN-LILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRY 432          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 83.6 bits (205), Expect = 1.700e-16
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTS--IIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR ART+   Q  YI T+  RF + + +   IP    G  L    SP T  +FE+MR + YRE VG+LM+AA  TR DI+     L++F  +PG  HW   ++ L+Y
Sbjct: 1268 RDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIP-LQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRY 1374          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A6H5J9U3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.870e-16
Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR A T++  Q  YI+++ ERF V +TS IP  A    +++S       E EE   + +RE+VG LMW A+ TR DIS     +A+ ++ P  +HW+ AQK L Y
Sbjct:   28 RDREAGTIEISQESYIRSVLERFNVVRTSSIP--ASPTVVNRSVM-----ENEEAGDVPFREVVGCLMWIASQTRPDISNAVRAVARHSNEPKLSHWKAAQKILNY 126          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 82.8 bits (203), Expect = 3.000e-16
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKT-SIIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR+ RTL   QH YI  +  RF +    S+      G  LS    P T  +FE+M+ I YRE++G+LM+AA  TR DI+     L++F  +PG  HW  A++  +Y
Sbjct:  352 RDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRY 458          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A401H3M5_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H3M5_9APHY)

HSP 1 Score: 81.6 bits (200), Expect = 3.710e-16
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAG-GKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR ARTL   Q  YI  +  RF +     + +    G  LS    P T  EFE+MR + YRE +G+LM+AA  TR DI+     L++F  +PG  HW  A++ L+Y
Sbjct:  131 RDRAARTLSLSQRAYIDGIVARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRY 237          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 82.0 bits (201), Expect = 5.490e-16
Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAGGK-ALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR  RT+   Q  YI T+  RF +     + +A     +L+   SP T  ++++MR I+YRE +G+LM+AA  TR D+S     L++F  +PG  HW  A++ ++Y
Sbjct:  270 RDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRY 376          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 81.6 bits (200), Expect = 8.030e-16
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0
Query:    2 RDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAG-GKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            RDR ARTL   Q  YI  +  RF +     + +    G  LS    P T  EFE+MR + YRE +G+LM+AA  TR DI+     L++F  +PG  HW  A++ L+Y
Sbjct: 1200 RDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRY 1306          
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 79.0 bits (193), Expect = 1.740e-15
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   30 SIIPSAAGGKALSKSDSPQTDAEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRVAQKALQY 107
            S+   A  G  LS + SPQTD E EEM+QI Y+E VGAL++ +T TR DIS    Q+AKFN +PG  HW+  ++  +Y
Sbjct:    6 SVSTPAEPGLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRY 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60652.13606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZWQ0_9AGAM3.080e-1839.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1BA9BB3.430e-1742.06uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]
E2LZP6_MONPE4.620e-1745.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY1.700e-1640.74Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A6H5J9U3_9PHAE1.870e-1640.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A401GP19_9APHY3.000e-1639.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H3M5_9APHY3.710e-1640.19Transposon Ty5-1 protein n=1 Tax=Sparassis crispa ... [more]
A0A4Y9ZVS1_9AGAM5.490e-1636.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY8.030e-1640.19Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
UPI001E1BDE4E1.740e-1548.72secreted RxLR effector protein 161-like n=1 Tax=Da... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60652contigH-elongata_contig60652:568..888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60652.13606.1mRNA_H-elongata_contig60652.13606.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60652 4..888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60652.13606.1 ID=prot_H-elongata_contig60652.13606.1|Name=mRNA_H-elongata_contig60652.13606.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MRDRNARTLKFDQHQYIQTMAERFGVTKTSIIPSAAGGKALSKSDSPQTD
AEFEEMRQIIYREIVGALMWAATMTRLDISLVAHQLAKFNDSPGPTHWRV
AQKALQY
back to top