prot_H-elongata_contig60648.13605.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60648.13605.1
Unique Nameprot_H-elongata_contig60648.13605.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
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BLAST of mRNA_H-elongata_contig60648.13605.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.600e-54
Identity = 98/138 (71.01%), Postives = 119/138 (86.23%), Query Frame = 0 
Query:    2 QAKDVVAEYAISGELEEAFTCLSEIDEAVRWAAVSEAISDGMERKQKHRDALAVVLAAAAKKGALTEDSLLRGINDVLELIPDVCLDVPQATTYVASAVAPLVLAGHLTLGSVVASPCEGLLEAGKAAEFAVAALKEV 139
            + KDVVAE+A+SGEL EA TCL EID  VRWAAVSEA++D  ERKQKHRDAL VVLAA AK GAL+E++LL+G  DVL+++PDVC+DVPQAT YVASA+APLVL GH+ LG +++SPCEGL+E GKAAEFAV A+K+V
Sbjct:  771 KGKDVVAEFAVSGELGEACTCLMEIDAEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQV 908
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BLAST of mRNA_H-elongata_contig60648.13605.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.570e-54
Identity = 97/138 (70.29%), Postives = 119/138 (86.23%), Query Frame = 0 
Query:    2 QAKDVVAEYAISGELEEAFTCLSEIDEAVRWAAVSEAISDGMERKQKHRDALAVVLAAAAKKGALTEDSLLRGINDVLELIPDVCLDVPQATTYVASAVAPLVLAGHLTLGSVVASPCEGLLEAGKAAEFAVAALKEV 139
            + KDVVAE+A+SGEL EA TCL EID  VRWAAVSEA++D  ERKQKHRDAL VVLAA AK GAL++++LL+G  DVL+++PDVC+DVPQAT YVASA+APLVL GH+ LG +++SPCEGL+E GKAAEFAV A+K+V
Sbjct:  731 KGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSKEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAMKQV 868
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BLAST of mRNA_H-elongata_contig60648.13605.1 vs. uniprot
Match: A0A8K1FHI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHI0_PYTOL)

HSP 1 Score: 65.9 bits (159), Expect = 8.050e-10
Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 0 
Query:    4 KDVVAEYAISGELEEAFTCLSEIDEAVRWAA-VSEAISDGMERKQKHRDALAVVLAAAAKKGALTEDSLLRGINDVLELIPDVCLDVPQATTYVASAVAPLVLAGHLTLGSVVASPCEGLLEAGKAAEF 131
            K +  EY    +LEEA TC+SE++ +   A  V++ ++ G+E+ +K R+A+A +LA   ++  L  ++    ++++LE   D+ +D+P   TY+A  +AP V AG +++  +V S  + +   GKAA+ 
Sbjct:  734 KGIFEEYVELRDLEEAVTCVSELNSSEHHALIVTQTMNVGLEKGKKEREAVATLLAGLHERQVLDSEAFATSLHELLEFAEDLEIDIPLTLTYIAEMIAPSVAAGGVSVSRLVES-IQHMTYNGKAAKL 861
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60648.13605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKQ5_ECTSI1.600e-5471.01Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A6H5L9P4_9PHAE3.570e-5470.29MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A8K1FHI0_PYTOL8.050e-1031.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003891Initiation factor eIF-4 gamma, MA3SMARTSM00544ma3_7coord: 1..110
e-value: 4.2E-15
score: 66.2
IPR003891Initiation factor eIF-4 gamma, MA3PFAMPF02847MA3coord: 4..110
e-value: 3.4E-15
score: 56.0
IPR003891Initiation factor eIF-4 gamma, MA3PROSITEPS51366MIcoord: 1..119
score: 16.067
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..139
e-value: 7.0E-29
score: 102.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60648contigH-elongata_contig60648:26..1150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60648.13605.1mRNA_H-elongata_contig60648.13605.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60648 26..1150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60648.13605.1 ID=prot_H-elongata_contig60648.13605.1|Name=mRNA_H-elongata_contig60648.13605.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MQAKDVVAEYAISGELEEAFTCLSEIDEAVRWAAVSEAISDGMERKQKHR
DALAVVLAAAAKKGALTEDSLLRGINDVLELIPDVCLDVPQATTYVASAV
APLVLAGHLTLGSVVASPCEGLLEAGKAAEFAVAALKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003891Initiation_fac_eIF4g_MI
IPR016021MIF4-like_sf
IPR016024ARM-type_fold