prot_H-elongata_contig117330.1360.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117330.1360.1
Unique Nameprot_H-elongata_contig117330.1360.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: D8LSC2_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC2_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 7.600e-38
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 0
Query:   68 QGGALMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKRE 153
            +G  LMSAEEVL +VLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFY+ATVGQ+AG DSP++EAL+ECR+NADDTFR AMKRE
Sbjct:   47 EGEGLMSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLDSPVLEALSECRKNADDTFRHAMKRE 132          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.510e-18
Identity = 61/151 (40.40%), Postives = 77/151 (50.99%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGA----LMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFR 147
            RY  D+LAWVHQ  A E+EL  ALFG   G+        + GG G +  +  A A   D     G     A    L++    L  V+  +ARPL++R+ TVLE VR+A   YRLL  LAFY  TVGQ+      L  ALTE R +    FR
Sbjct:  310 RYTADVLAWVHQTAAAERELLAALFGSG-GDAAHNGARRLGGGSGSSGGAEPADADGVDGAAEAGGADADAGSAGLVTVPAALSGVMSAVARPLRARLGTVLEDVRDAVTAYRLLGFLAFYGETVGQLVDSREGLGLALTEARADGLTRFR 459          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A316U6R8_9BASI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U6R8_9BASI)

HSP 1 Score: 79.7 bits (195), Expect = 2.060e-14
Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGALMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKRE 153
            RYVGD+LAWVHQAVA+E+E  G L G+A GEG         G +G           D  +G + G+ QG   +   E+L R L+G  RPLQ R+     S     V ++L NL+ FYK T+    G    L + L E   ++   F   ++R+
Sbjct:  370 RYVGDMLAWVHQAVASEREFLGQLLGEAEGEGGRKTGERRRGIEGSI---------DWSSGEK-GLPQGKKAIYMRELLDRCLEGCCRPLQVRIEQTTRSQEGCIVPFKLANLVQFYKVTMQSTIGSKVSLTKTLEEISVSSYQAFFGTLERQ 512          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: C1MX75_MICPC (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MX75_MICPC)

HSP 1 Score: 79.3 bits (194), Expect = 2.760e-14
Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALF-GDAAGEGXXXXXXVVEGGDGVATASA---TAAARDRDNGPRRGMKQGGALMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKRE 153
            RYVGD+L W+HQA A EKEL  AL   +   EG         GGDG  T       AA+ +    P     +   L    +VL R+L G+ RP + RV  VL S   A V ++L NLL FY+  + +I G D+ L   + EC  +A  TF   ++++
Sbjct:  275 RYVGDMLGWLHQATAGEKELVDALLLAETPREG---------GGDGAETGGXXXPNAASPNAXXTPTPPEDEDDELADPAKVLDRILDGVCRPFKVRVEQVLSSTPPALVAFKLGNLLTFYRGVMVKIIGADAGLAATIDECGSSAKMTFESMIQKD 422          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: C1EEF9_MICCC (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Micromonas TaxID=38832 RepID=C1EEF9_MICCC)

HSP 1 Score: 78.6 bits (192), Expect = 5.100e-14
Identity = 55/163 (33.74%), Postives = 76/163 (46.63%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGALMSAEE-------VLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKREVVQ 156
            RY GD+L W+HQA A EKEL  AL                EG DG    +                 + GA +  EE       VL R+L+G+ RP + R+   L +   A V Y+L NLL FY+ T+G I G+D+ L+  + ECR +A  TF   + R   +
Sbjct:  278 RYAGDMLGWLHQAAAGEKELVAALL-------------ATEGDDGDEEKNXXXXXXXXXXXXXXXXHKEGAGVDEEEEAADPEAVLDRILEGVCRPFKVRLEQALNASPTALVAYQLANLLDFYRETLGAIVGKDASLVATVEECRASAARTFEDQISRRAAK 427          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A7S1X027_9CHLO (Conserved oligomeric Golgi complex subunit 6 (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X027_9CHLO)

HSP 1 Score: 77.8 bits (190), Expect = 9.050e-14
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGALMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTF 146
            RY+GD+LAWVHQ++A+E EL  +LFG  AGE            +G+           +++G    ++  G + S   +L RV + I RPL+ R+  VL S     + +RL +LLAFY AT+G I GE+  L+E L  C+  A   F
Sbjct:  283 RYIGDMLAWVHQSLASEHELLVSLFG--AGE------------EGMTR---------KESGE---LRLSGDMPSTAVLLDRVFESICRPLKVRIEQVLMSSPSLLLCFRLSHLLAFYSATMGNILGEEGQLVETLKGCKEMASRIF 402          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A5C3EZF5_9BASI (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A5C3EZF5_9BASI)

HSP 1 Score: 77.8 bits (190), Expect = 9.590e-14
Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGALMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKREVV 155
            RYVGD+LAW+HQ +A+E+E   ALFG+  GEG         G +G    SA+ +    D      M  G AL+   EVL R L+G  RPL+ RV   + S   +   YRL +L+ FY+ T+ +  G  + L + L E    +   F + + R+  
Sbjct:  350 RYVGDMLAWIHQTLASEREFLTALFGEKEGEGGRRIGQRRRGLEGSVDLSASLSGGAGDAAA---MGPGEALV--REVLNRNLEGCCRPLKIRVQQTVRSQEGSVTTYRLAHLVHFYRQTMEKTIGTKAVLSQTLAEISTTSLSAFYVTLDRQAA 499          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A433QYJ7_9FUNG (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QYJ7_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 1.010e-12
Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGG----------ALMSAE----EVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTF 146
            RYVGD+LAW+HQAVA E+E   ALF D  GE               +T S+  + +     P  G+ + G          AL S E    E+L RVL+G +RPL++RV  VL S   A   YR+ NL+ FY  T+G++ GE + L + L E    A   F
Sbjct:   71 RYVGDMLAWLHQAVAGEREFLEALF-DYRGEN--------------STNSSRRSVKQAPRSPE-GVNENGETADGEVIHIALQSDESAILELLDRVLEGTSRPLKTRVEQVLISQPGAITSYRISNLIQFYSITIGKMLGERAELSKTLNEITEAAFRMF 214          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A433DD44_9FUNG (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DD44_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 1.110e-12
Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGG----------ALMSAE----EVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTF 146
            RYVGD+LAW+HQAVA E+E   ALF D  GE               +T S+  + +     P  G+ + G          AL S E    E+L RVL+G +RPL++RV  VL S   A   YR+ NL+ FY  T+G++ GE + L + L E    A   F
Sbjct:   71 RYVGDMLAWLHQAVAGEREFLEALF-DYRGEN--------------STNSSRRSVKQAPRSPE-GVNENGETADGEVIHIALQSDESAILELLDRVLEGTSRPLKTRVEQVLISQPGAITSYRISNLIQFYSITIGKMLGERAELSKTLNEITEAAFRMF 214          
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Match: A0A8H4RYJ8_9HELO (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RYJ8_9HELO)

HSP 1 Score: 74.7 bits (182), Expect = 1.120e-12
Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 0
Query:    1 RYVGDILAWVHQAVATEKELAGALFGDAAGEGXXXXXXVVEGGDGVATASATAAARDRDNGPRRGMKQGGA-----LMSAEEVLRRVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAMKREVV 155
            RYVGD+LAW H A  +E+E    LF              +  GD +A      A R+ +   R    + GA     L +  E++ R + G+AR L+ R+  V+++  E  + YR+ NLL FY+ T  ++ G+DS L+++LT    +A   FR  M+  V 
Sbjct:  308 RYVGDMLAWTHSATVSEREALEVLF--------------ISEGDEIA--KGIQAGRENEPWNRIAEDEEGASSFDGLKALNELVDRDVAGVARVLRQRIGQVIQTHEETIMAYRIANLLNFYRVTFSKLLGDDSVLLDSLTNLEESALKQFRALMRDHVA 451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117330.1360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC2_ECTSI7.600e-3884.88Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A836CBI3_9STRA6.510e-1840.40Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A316U6R8_9BASI2.060e-1435.95Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
C1MX75_MICPC2.760e-1436.31Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
C1EEF9_MICCC5.100e-1433.74Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
A0A7S1X027_9CHLO9.050e-1436.99Conserved oligomeric Golgi complex subunit 6 (Frag... [more]
A0A5C3EZF5_9BASI9.590e-1434.84Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
A0A433QYJ7_9FUNG1.010e-1237.50Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A433DD44_9FUNG1.110e-1237.50Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A8H4RYJ8_9HELO1.120e-1231.88Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010490Conserved oligomeric Golgi complex subunit 6PFAMPF06419COG6coord: 1..154
e-value: 3.1E-30
score: 105.0
IPR010490Conserved oligomeric Golgi complex subunit 6PANTHERPTHR21506COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6coord: 1..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117330contigH-elongata_contig117330:218..1167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117330.1360.1mRNA_H-elongata_contig117330.1360.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117330 218..1167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117330.1360.1 ID=prot_H-elongata_contig117330.1360.1|Name=mRNA_H-elongata_contig117330.1360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
RYVGDILAWVHQAVATEKELAGALFGDAAGEGGGGGSSVVEGGDGVATAS
ATAAARDRDNGPRRGMKQGGALMSAEEVLRRVLQGIARPLQSRVSTVLES
VREAGVGYRLLNLLAFYKATVGQIAGEDSPLMEALTECRRNADDTFRLAM
KREVVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010490COG6