prot_H-elongata_contig60493.13594.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60493.13594.1
Unique Nameprot_H-elongata_contig60493.13594.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig60493.13594.1 vs. uniprot
Match: D8LTL8_ECTSI (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL8_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.780e-21
Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 0 
Query:    2 VQETFPFVKTSTERGPGDAVIIVCARAEVYPELRKLLSEFDLEALQRLVNRGPNVATGSKENVTLACDADRDHRTKVHRAIA 83
            VQETFPF+KT+TE+ P  +V +VC +A   P LR LLS  DLEALQRLVNRGP+   G+   VTL+ D DR +RT VHRAI+
Sbjct:  220 VQETFPFIKTTTEKAPDGSVTVVCTQASPLPALRGLLSGPDLEALQRLVNRGPS-GKGADSGVTLSSDMDRANRTLVHRAIS 300
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60493.13594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTL8_ECTSI7.780e-2159.76TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60493contigH-elongata_contig60493:119..1049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60493.13594.1mRNA_H-elongata_contig60493.13594.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60493 119..1061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60493.13594.1 ID=prot_H-elongata_contig60493.13594.1|Name=mRNA_H-elongata_contig60493.13594.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MVQETFPFVKTSTERGPGDAVIIVCARAEVYPELRKLLSEFDLEALQRLV
NRGPNVATGSKENVTLACDADRDHRTKVHRAIA
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