prot_H-elongata_contig6049.13593.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6049.13593.1
Unique Nameprot_H-elongata_contig6049.13593.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length354
Homology
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: D8LH71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH71_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 4.060e-88
Identity = 183/372 (49.19%), Postives = 226/372 (60.75%), Query Frame = 0
Query:    1 MRIRLVRQAALSLIRAQEREHAGPDPFDWSNVSTEEYMAAVDRLIPPVDGDMDALDDEK-ITAAKESRNLKDIFLEKRGGVHGCKVLALLRENKLATFEKDMAAFAKELEMALLPIPKILQLYKNSGLLDEGVDEMEDAN--GHDNDVRESPTK-------------RAASSLANGSSKRKRGDSSDPSSALALAKANEVLQREMGGH-PGTVAEALAIGESVRELRSPRRKRTTI----GTGADERWTETETETKKTTPKYLTIHDSPGEQVSFDDSQSIDEPQPSPRTLQDHPTPPKGPVLRSPTRVVSKKKGSRGRARVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNKD 351
            MR  LVRQAALS   AQ+R HA P+PFDW +V T+ Y+  VDRLIP VD D+DALDDE+ ++A+KE RNL D+F EK   V   K+  LL+ENK+ TFEKDM AF + L+ ALLP PK+L +Y N G  D  V +M D    G      + P +             +A S +              P +A ALAKANE LQ+E+  H PGTV+EALAI E +    SP  KR  +    G  AD+R     +   + + K +T  +S GEQV FDDSQS+DEPQ +   L D P+P K   L S +  V  KK S  R R PWTEEEV HL AAV ALG GKW+LAL+QY FQ+CRT+VDLKDKWRNL KD
Sbjct:  114 MRAALVRQAALSCFLAQQRNHARPEPFDWGSVCTKAYIKVVDRLIPQVDFDLDALDDEEQMSASKERRNLTDVFKEKHCSVSSIKLRTLLKENKVGTFEKDMKAFTRALDQALLPRPKLLTMYSNDGS-DMNVVDMTDGRQVGLQGSTSKPPMRSXXXXXXXXXXXXKAVSPMP--------ATEETPPTAQALAKANEGLQQELNDHRPGTVSEALAISERLPPPSSPAAKRAAVEDNSGGPADKRPGRAPS---RRSGKSVTRRESRGEQVDFDDSQSVDEPQEARAALGDRPSPAKAAALPSASGKVKAKKRSGPRTRHPWTEEEVKHLKAAVMALGRGKWSLALAQYKFQDCRTAVDLKDKWRNLTKD 473          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A6B2LV33_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LV33_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 7.760e-8
Identity = 28/51 (54.90%), Postives = 31/51 (60.78%), Query Frame = 0
Query:  300 RVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNK 350
            R+ WTE EV  L   V   G+G WA  L  Y F   RTSV LKDKWRNL+K
Sbjct:   17 RLTWTEHEVKQLEKGVAVYGVGHWAEILKAYKFLPERTSVSLKDKWRNLSK 67          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A369RTP9_9METZ (Telomeric repeat-binding factor 1 n=2 Tax=Trichoplax TaxID=10227 RepID=A0A369RTP9_9METZ)

HSP 1 Score: 64.7 bits (156), Expect = 9.340e-8
Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  298 RARVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNKDKD 353
            R + PW+++E  +L+  V+  G+G WA+ LS++NF   RT+VDLKDKWRN+NK KD
Sbjct:  492 RMKRPWSQKEEDNLSEGVQLYGVGNWAMILSEFNFV-ARTNVDLKDKWRNMNKKKD 546          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A7S2TXX0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TXX0_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 2.390e-6
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  288 VVSKKKGSRGRARVPWTEEEVMHLNAAVKALGIGKWALALSQYN-FQECRTSVDLKDKWRNLNK 350
            + +KKK  + R R+ W+  E  HL   V+  G+GKWA  L +Y    + RTSVDLKDKWRN++K
Sbjct:   44 MATKKKXXQRRKRIFWSTCEETHLRLGVREFGVGKWAKILKKYAPIFKNRTSVDLKDKWRNISK 107          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A7S1HJC0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HJC0_HEMAN)

HSP 1 Score: 58.9 bits (141), Expect = 2.460e-6
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0
Query:  303 WTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNK 350
            WTEEEV  L   V+  G G+WA  L  + F+  RT+V+LKDKWR LNK
Sbjct:  204 WTEEEVEQLKRGVRQYGEGRWAQILDSFTFKATRTAVNLKDKWRTLNK 251          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A7S3Y534_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y534_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 5.460e-6
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  282 LRSPTRVVSKKKGSRGRARVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNK 350
            L SP +  +  +  RG  R  W+  EV +L   V  LG+G WA  L++Y F + RTSV+LKDKWRNL K
Sbjct:  168 LSSPPKGGTFPRRRRGGGRRKWSAAEVRNLERGVAELGVGNWAPILARYQF-DGRTSVNLKDKWRNLEK 235          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: UPI000A2A71D7 (telomeric repeat-binding factor 1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A71D7)

HSP 1 Score: 58.2 bits (139), Expect = 1.090e-5
Identity = 35/71 (49.30%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  282 LRSPTRV--VSKKKGSRGRARVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNK 350
            L SP R   +S  K  + R + PWTEEE+  L   V   G G WA  L  Y+F+  RTSVDLKDKWRN +K
Sbjct:  389 LPSPKRCLNISLPKPPKRRKKNPWTEEELSWLCKGVDIYGEGNWAKILRMYSFR-FRTSVDLKDKWRNFSK 458          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A453LQW1_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LQW1_AEGTS)

HSP 1 Score: 55.5 bits (132), Expect = 2.320e-5
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  295 SRGRARVPWTEEEVMHLNAAVKALGIGKWALALSQYNFQE---CRTSVDLKDKWRNLN 349
            S G  +  WT EE   L A +   G+G W L L   +F+    CR++VDLKDKWRN+N
Sbjct:   28 SMGARKQKWTSEEEAALRAGIARYGVGSWRLILKDDDFRSILSCRSNVDLKDKWRNIN 85          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A453LQX0_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LQX0_AEGTS)

HSP 1 Score: 53.9 bits (128), Expect = 2.350e-5
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:  303 WTEEEVMHLNAAVKALGIGKWALALSQYNFQE---CRTSVDLKDKWRNLN 349
            WT EE   L A +   G+G W L L   +F+    CR++VDLKDKWRN+N
Sbjct:    6 WTSEEEAALRAGIARYGVGSWRLILKDDDFRSILSCRSNVDLKDKWRNIN 55          
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Match: A0A7S0KDI4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KDI4_MICPS)

HSP 1 Score: 56.2 bits (134), Expect = 3.600e-5
Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  287 RVVSKKKGSRGRA---RVPWTEEEVMHLNAAVKALGIGKWALAL--SQYNFQECRTSVDLKDKWRNL 348
            RV  KK+G RG     R+ WT+EEV  L   V   G G W   L   ++ FQ+ RT+VDLKDKWRN+
Sbjct:  283 RVGGKKRGWRGEGISPRISWTDEEVEALREGVNKHGKGNWKAILVEKRHVFQQERTTVDLKDKWRNM 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6049.13593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LH71_ECTSI4.060e-8849.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6B2LV33_9EUKA7.760e-854.90Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A369RTP9_9METZ9.340e-851.79Telomeric repeat-binding factor 1 n=2 Tax=Trichopl... [more]
A0A7S2TXX0_9EUKA2.390e-646.88Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S1HJC0_HEMAN2.460e-654.17Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S3Y534_HETAK5.460e-646.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI000A2A71D71.090e-549.30telomeric repeat-binding factor 1 n=1 Tax=Exaiptas... [more]
A0A453LQW1_AEGTS2.320e-544.83Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453LQX0_AEGTS2.350e-548.00Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A7S0KDI4_MICPS3.600e-547.76Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 300..348
e-value: 6.9E-6
score: 26.2
NoneNo IPR availableGENE3D1.10.246.220coord: 289..353
e-value: 3.6E-14
score: 54.5
NoneNo IPR availablePANTHERPTHR46734:SF1TELOMERIC REPEAT-BINDING FACTOR 1coord: 144..351
NoneNo IPR availablePANTHERPTHR46734FAMILY NOT NAMEDcoord: 144..351
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 295..353
score: 10.964
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 298..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6049contigH-elongata_contig6049:3719..8731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6049.13593.1mRNA_H-elongata_contig6049.13593.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6049 3650..9707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6049.13593.1 ID=prot_H-elongata_contig6049.13593.1|Name=mRNA_H-elongata_contig6049.13593.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=354bp
MRIRLVRQAALSLIRAQEREHAGPDPFDWSNVSTEEYMAAVDRLIPPVDG
DMDALDDEKITAAKESRNLKDIFLEKRGGVHGCKVLALLRENKLATFEKD
MAAFAKELEMALLPIPKILQLYKNSGLLDEGVDEMEDANGHDNDVRESPT
KRAASSLANGSSKRKRGDSSDPSSALALAKANEVLQREMGGHPGTVAEAL
AIGESVRELRSPRRKRTTIGTGADERWTETETETKKTTPKYLTIHDSPGE
QVSFDDSQSIDEPQPSPRTLQDHPTPPKGPVLRSPTRVVSKKKGSRGRAR
VPWTEEEVMHLNAAVKALGIGKWALALSQYNFQECRTSVDLKDKWRNLNK
DKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf