mRNA_H-elongata_contig60461.13587.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI) HSP 1 Score: 231 bits (588), Expect = 2.690e-69 Identity = 119/198 (60.10%), Postives = 146/198 (73.74%), Query Frame = 1
Query: 1 IWGLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPHHAIPLVALASCKGPNPRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALTDVDAPEVLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRSMFAPDD 594
I GLCVQ + K+TKFGGV ++EEI L+KGE HIG +HTVIS +ALG+ P+HA+PL+A A C PNP QQ+LAL TI V N+ P FG +GPI+LV SDGDAVRR VLH LT +VL+ FKL++KTTS + + QCFD KHC KR RT+DISKK V+VS G L D+YPELFR+HD NP TY ++F PDD
Sbjct: 90 IVGLCVQCTPRKNTKFGGVSSVEEIAGMLDKGECHIGHQHTVISGAALGDRPYHAVPLLAFAVCNEPNPLQQQLALRTILDVWNSNPAFGNTLGPIVLVCSDGDAVRRKVLHDLTSGGTSDVLNVFKLMDKTTSVEGLMQCFDLKHCAKRYRTKDISKKGVRVS-GGLALNRDTYPELFRVHDGNPEATYDALFNPDD 286
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI) HSP 1 Score: 195 bits (495), Expect = 5.110e-55 Identity = 109/231 (47.19%), Postives = 133/231 (57.58%), Query Frame = 1
Query: 1 IWGLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPHHAIPLVALASCKGPNPRQQRLALETIAH--------------------------------VRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALTDVDAPEVLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRSMFAPDDR 597
I GLCVQH+ KSTKF +DNLE++ L +G HIG EHTVISA ALG++PHHAIP+VA ASCK NP QQ+L ET+ H + F I PI+LV SDGD VRR +L+ T E F LL+ TS + QCFD KH LKR+RTRDISK+ VK+S L CDS+P+LFR +D P ETYR++ PDDR
Sbjct: 90 ILGLCVQHTPPKSTKFD-LDNLEDLSGRLNEGHSHIGSEHTVISACALGDTPHHAIPVVAFASCKARNPGQQQLVFETVRHCIIVSLVEVPGKLCLQLIWLMITRKVEASRGILEVWNDRFAPTIDPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDAMTSEYGVVQCFDLKHNLKRLRTRDISKRGVKISASALPLNCDSFPQLFRWYDCKPNETYRTLLNPDDR 319
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: D7G0J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J3_ECTSI) HSP 1 Score: 148 bits (373), Expect = 2.400e-38 Identity = 81/176 (46.02%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 64 LEEILANLEKGERHIGVEHTVISASALGESPHHAIPLVALASCKGPNPRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALTDVDAPEVLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRSMFAPD 591
L+ A +G R +G + ++ HHAIP+VA ASCK NP QQ++ ETI V N F IGPI+LV SDGD VRR +L+ T E F LL+ TTS + QCFD KH LKR+RTRDISK+ VK+ L CDS+P+LF+ +D P ETYR++ PD
Sbjct: 49 LKTFPAGSTRGTRTVGANTPSSPLALFEKNSHHAIPVVASASCKARNPGQQQVVFETILGVWND--RFAPTIGPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDATTSEHGVVQCFDLKHNLKRLRTRDISKRGVKIPAGALPLYCDSFPQLFQWYDCKPNETYRTLLNPD 222
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A164SFF9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Sistotremastrum niveocremeum HHB9708 TaxID=1314777 RepID=A0A164SFF9_9AGAM) HSP 1 Score: 149 bits (375), Expect = 1.170e-35 Identity = 129/441 (29.25%), Postives = 204/441 (46.26%), Query Frame = 1
Query: 1 IWGLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPHHAI--PLVALASCKGPN-PRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALT-DVDAPE------VLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRSMFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLT-HVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLK----------------DMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMA 1242
I GLC +H +S +F +D +EIL L GE H+ E +V++ S LG+SP + P+V +CK P Q RL T ++ E + G + ++ +DGDA RR L LT D E +L P L + T FD KH KR R+ +S K + ++ G L D + + P T R + AP+D+Q+V +A+++L + +A F LA+ L+ + +LL + T+R+ L LS AHLL+ + + + Q Y D Q+TI+ ++CV KV+ P+ + L +I TDALE LF + RT+ + NVD +LA R AV I + +W + RL+ + DH+N + W+ +++ N+ W +GR A
Sbjct: 152 IIGLCREHGHKRSLEFNTMDEADEILKCLVSGEMHLSSEASVLAVSGLGDSPKEGVARPIVLSGTCKRETVPNQTRLLRLTADTLKE---ELKSVNGRLYVIATDGDARRRRALIPLTLSHDLQEGSPLYSMLGPLPLFNRRMGVDECTVDFDQKHLFKRARSALLSAKGITIN--GVKLTKDVIKAHLKS-EGMPETTARILLAPEDKQDVPVALRLLSAIARLPDAKPES----PPLFRLARKC--LRYLGHLYRHLLEAHTNLKLTLREQLAHLSAAAHLLLAGYTAFKGDLCPSQFYFDQQSTIKTAYFCVAKVKRDNPKGQLHLMRIGTDALEKLFGIYRTMIGNDTNVDTYQLASRATGAVNCTRILEEKPDWDPGTRRLQMKSSIVESTEDDSVAAEKSDHINPKAWE-----GDVHVEHANLQTHWIQGRATA 575
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A074RND4_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Rhizoctonia solani 123E TaxID=1423351 RepID=A0A074RND4_9AGAM) HSP 1 Score: 144 bits (362), Expect = 2.580e-33 Identity = 127/437 (29.06%), Postives = 194/437 (44.39%), Query Frame = 1
Query: 1 IWGLCVQHSLA---KSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPH-HAIPLVALA-SCKGPNPRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALT---DVDAPEVLHP----FKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRS---MFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLTHVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLK----DMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMATSIL 1254
I G+C H+ + G++ + + A L+ G H E TVI+ + G PH +A ++AL+ +CK + L + + +P A GPI + +DGD RR + H + + L+P L +T D KH KR T SK + VS LI Y +L S PGET S +F D QNV A ++L + + + +A H + + + +P+ ++ Q L LS AHLL L+R ++GQLY D+Q TI+ ++ V K Q+ P+ ++L Q TD LE F+ +RT+TH N+D +LA R AA ++EIY +N + + S RL IDH N W S +R CW+ G+ A+ IL
Sbjct: 159 IAGICRDHASKFDLNAVSSRGLEGIRAVQAALDAGHCHRAKEATVIAIAGFGAEPHIYAARMIALSGTCKAESEEAGYLVIVYTIESWDVSPHGRAMHGPISSLETDGDPKRRRIFHRYCIRIRLPSTSKLYPALGSLPLFNTFCGPDEITNGGDFKHEEKRFATALRSKDGIMVSN---ALISSGYIKLLLA--SLPGETLASVNPLFDVTDHQNVPNANRLLCLLYQASQLPD---------VVMAPEHQAFVILGELLHSFTQPFTNPALSLSQQLTHLSTCAHLLFALYRLNGGSFISGQLYYDVQTTIKTAYFTVAKSQQIDPDGPVYLLQTGTDRLEQRFSTMRTMTHDRNMDIVQLADRAEAAQYIDEIYARNPDLYRGSYRLSLDGNTGIDHTNPASWTGDVTASSAGIR-----SCWSAGQERASQIL 576
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A165AWI1_EXIGL (Uncharacterized protein (Fragment) n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165AWI1_EXIGL) HSP 1 Score: 134 bits (337), Expect = 1.790e-30 Identity = 122/443 (27.54%), Postives = 189/443 (42.66%), Query Frame = 1
Query: 1 IWGLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESP--HHAIPLVALASCKGPNPRQQ----RLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALT---DVDAPEVLHPF----KLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPG---ETYRSMFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRT-LTHVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLK------------DMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMA 1242
I G C +H S +F VD + + +E + H+ E TV++ A P + A P +CK Q R ALE + N +GP + SDGD VRR + A+T D+ A L+P L + T +T D KH KR+R + KV+ G + P + R H + G ET ++ P+D Q+V L ++L +A E + ++ L + I LL+ + +VR+ LE LS VAH+++ L+R R + QLY DI ++ +F+C K + H + L +D LE F + RT + N D +L+ R+ A V + I ++ EW + RL+ +DH+N W L + V L CWN GR +A
Sbjct: 171 ILGPCREHGGMCSLEFCSVDEAKALFRAIEAEKVHVASEATVLAIGAFSSDPIIYEARPFGISGTCKREKVEGQEQLIRTALEACKRLENE-------LGPCYCIASDGDGVRRSAMAAITMCEDLPASSPLYPLLGPLPLFNRWTGPNALTCDIDMKHVAKRLRNTLLRVSGTKVN--GVTIT----PLVLRAHLIDGGMHAETADALLNPNDHQDVVLMYRLL---AAIARLPETSTNNTPISQDVRRV---LWLLGQIYYYLLSAYTEVRLSVREQLEYLSAVAHMVMELYRSDRQAFIPSQLYIDIMIMVKNVFFCFAKTKVHDSKARFLLMLRGSDRLEKNFGLTRTSVGSDRNADVYQLSTRMLAMVQIALILAEHPEWHRGPRRLRLPPNILSEADLDSRVDHINPAAWV-----GDLTVTSVIPLTCWNHGRELA 589
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A066VD41_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Rhizoctonia solani AG-8 WAC10335 TaxID=1287689 RepID=A0A066VD41_9AGAM) HSP 1 Score: 134 bits (338), Expect = 3.560e-30 Identity = 126/437 (28.83%), Postives = 186/437 (42.56%), Query Frame = 1
Query: 1 IWGLCVQHSLA---KSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPH-HAIPLVALA-SCKGPNPRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHA-------LTDVDAPEVLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRS---MFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLTHVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLK----DMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMATSIL 1254
I G+C H+ + G++ + I A LE G H E TVI+ + G H +A ++AL+ +CK + L + N +P GPI + +DGD +R + H L L L +T D KH K T SK + V+ LI + L + S PGET S +F D QNV A ++L + + + LA H + + + +P+ ++ Q L LS AHLL L+R ++GQLY D+Q TI+ ++ V K QE PE ++L Q TD LE FA + T+TH N+D +LA R AA ++EIY +N + + S RL IDH N W +R CW+ G+ A+ IL
Sbjct: 202 IAGICRDHASKFDLNAVSSRGLEGIRAIQAALEAGHCHRAKEATVIAIAGFGAEAHIYAARMIALSGTCKAESEEAGYLLMVCTVDGWNLSPHGLVMYGPISSLETDGDPKQRRIFHRYCIRAKLLPTSKLYPALGSLPLFNTFCGPDEITHDGDFKHEEKHFATALRSKDGIMVAN---TLISSGHIRL--LVASLPGETLASVTPLFDVTDHQNVPNANRLLCLVYQASQLPD---------IVLAPEHQSFVILGELLHSFTQPFTNPTLSLSQQLTHLSTCAHLLFALYRLNGGAFISGQLYYDVQTTIKTAYFTVAKSQEIDPEGPVYLLQTGTDRLEQRFATMWTMTHDRNMDIVQLADRAEAAQYVDEIYARNPDLYQGSYRLSLDGNTGIDHTNPASWTGDVTASGAGIR-----SCWSTGQERASQIL 619
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.130e-29 Identity = 83/241 (34.44%), Postives = 117/241 (48.55%), Query Frame = 1
Query: 622 ILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLTHVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLKDMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMATSILKTHDDY-AHVTHATFDVLENEGITIFFPFG 1341
+++ V VA AD+ G + +D++V A+I + LL VL + + + +LL GL+ VA LL+ ++R ++T GQL D+QATIR +FY VL+ Q CP ++LW I TD LENLFA+VRTLTH NVDAKE R GA + +E++ D +D IL+ H Y A V T L+ G+T F PFG
Sbjct: 1 MMQTVVSVAAADKPTFAGLDASPTMQAAVEDMQVLASITEPLLDVLLNSEEKISELLRGLARVAFLLLFVYRMKKTRFKPGQLDHDLQATIRLLFYVVLEAQVRCPRERLYLWMIGTDGLENLFAIVRTLTHASNVDAKEAIERFGAVIGVEQV---------------DAVD------------------------------------ILRGHPSYEASVNRETISELQKVGVTTFLPFG 190
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A371DN83_9APHY (PHD domain-containing protein n=1 Tax=Polyporus brumalis TaxID=139420 RepID=A0A371DN83_9APHY) HSP 1 Score: 130 bits (326), Expect = 1.540e-28 Identity = 123/474 (25.95%), Postives = 205/474 (43.25%), Query Frame = 1
Query: 1 IWGLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESPHH--AIPLVALASCKGPNPRQQRLALETIAHVRNTTPEFGAAIGPIILVTSDGDAVRRGVLHALT-----DVDAP--EVLHPFKLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMH--DSNPGETYR--SMFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFRERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLTHV-INVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRL------------KDMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMATSILKTHD-DYAHVTHATFDVLENEGITIFFPFG 1341
I G+C +H S +F +D L + L + H E TVI+ S L ++ + A+P V +CK + + LE T G+ + + SDG++ R L ALT V +P +L P L + +T D +H LKR R + ++++ S P L ++H D ++Y S+ +P+D Q+V LA K+L ++ A+ +T + L + + LL D S ++R LE L V+HLL++L+ + G + LY D Q I+ + C K+ P +++ + TD LE +F +VRT+ NVD +LA R+ A I ++ EW + RL DH+N W ++++ + + CW GRR+A S L+ D Y H+ + + + + PFG
Sbjct: 633 ILGVCREHGHQCSLEFRSLDELRVLSDLLSSQQVHAATEATVIAVSCLSDNHNEYAALPFVISGTCKQEDANAHAVLLERAVEALRTHFGLGSR-RKVYCIASDGESRRGKALGALTMSRELGVSSPIYPLLRPLSLFNRLVGANDLTCDKDWRHVLKRFRNALLRSAPLRINGSSL-----SRP-LIKVHLMDGLKMKSYTADSLLSPNDPQDVTLAFKLLNSISSLSLAEPTS----STPI-YQRTRRSLSLLGRVYMRLLKCYTDTSSSLRDQLEQLGAVSHLLLVLYMHDKGGFIPAILYLDAQIMIKNAYVCTAKMIVDRPTGRIWIIMLGTDGLEKVFGIVRTMIGSDSNVDQLQLANRVTGATQCSRILQEHPEWDRGPRRLAVPSLQGRADDVSTAADHVNPASWT-----GDVSVQDIVLQTCWYRGRRLAESDLQEFDIPYEHILCPSASTRD---VDVLRPFG 1086
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Match: A0A8H8S8A2_9AGAM (Uncharacterized protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8S8A2_9AGAM) HSP 1 Score: 123 bits (308), Expect = 3.070e-26 Identity = 116/442 (26.24%), Postives = 194/442 (43.89%), Query Frame = 1
Query: 7 GLCVQHSLAKSTKFGGVDNLEEILANLEKGERHIGVEHTVISASALGESP--HHAIPLVALASCKGPNPRQQRLALETIAHV-RNTTPEFGAAIGPIILVTSDGDAVRRGV----LHALTDVDAPEVLHPF----KLLEKTTSRKCMTQCFD*KHCLKRIRTRDISKKEVKVSKEGFVLICDSYPELFRMHDSNPGETYRSMFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFGLAKLHDDLKVKATIGDNLLAVLCDPSKTVRQLLEGLSCVAHLLIILFR--ERRTGVMTGQLYDDIQATIRGIFYCVLKVQEHCPETLMFLWQISTDALENLFAMVRTLT-HVINVDAKELAGRLGAAVALEEIYGKNNEWAKNSLRLK------------DMIDHLNVRIWKEAGPPDSLNLRVVNVLGCWNEGRRMATSIL 1254
G+C +H + LE+++ ++K E HI E TVI+ L + + A P+V +CK ++ ++T V + P+ G +G +I +TSDG+A RRG L + + + P +L +T D KH KR+R + V+ V I + L P M PDD+Q+V LAV++LR + D K A+ L + T+ D ++ D S ++ + LE LS AHL + L + T + QLY D+ I+ + C K + + P+ +L + TD LE+ F +VRT+ + N D +LA RL A I ++ +W + RLK IDH++ +WK ++N+ V+ L W +GR+ ++++
Sbjct: 481 GVCREHGDRVALSMDSFSELEQLVNAIDKKEVHIASECTVIAIGLLTQDKRLYAARPIVISGTCKRKKSKEHTQLIQTTIQVCQLLAPKVG--LGRLICLTSDGEA-RRGASFSDLTLIKPIQPTSAIFPLLSGLQLFNTLVGIDDLTGDKDYKHVFKRLRNLLLGPLGTFVNG---VHITSAVLRLHLRDCGVPKTRIDHMLCPDDKQDVTLAVRLLRSVSGMPPPDSD------AKPAYARSRRALNLLGTLMDLIIKPYIDISLSLSEQLEHLSGAAHLTLWLHTCSTKATRFLPLQLYGDLMIMIKNAYICFAKAKVNDPKGHFWLILLGTDRLESAFGIVRTMVGNNTNADILQLASRLSNATTCANILAEHPQWDRAPRRLKLYSIDSSTAGIAPSIDHISPAVWK-----GNVNVEHVHPLTTWRKGRQSLSALV 905 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60461.13587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60461.13587.1 >prot_H-elongata_contig60461.13587.1 ID=prot_H-elongata_contig60461.13587.1|Name=mRNA_H-elongata_contig60461.13587.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp MHDSNPGETYRSMFAPDDRQNVGLAVKILRKQVEVANADEGQLGGFATKFback to top mRNA from alignment at H-elongata_contig60461:2268..3617- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60461.13587.1 ID=mRNA_H-elongata_contig60461.13587.1|Name=mRNA_H-elongata_contig60461.13587.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1350bp|location=Sequence derived from alignment at H-elongata_contig60461:2268..3617- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60461:2268..3617- >mRNA_H-elongata_contig60461.13587.1 ID=mRNA_H-elongata_contig60461.13587.1|Name=mRNA_H-elongata_contig60461.13587.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig60461:2268..3617- (Himanthalia elongata Himel1 dioecious)back to top |