prot_H-elongata_contig60353.13576.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig60353.13576.1
Unique Name	prot_H-elongata_contig60353.13576.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	161

Homology

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: D8LB17_ECTSI (PINc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB17_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.900e-111
Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 0

Query:    1 KAKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 160
            KAKEAETNHVKQVPT+MFFAHNTALGPPYHVL+DTNFINFSIKNKLDI KAMMDCLLAKAIPC+TDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSH GTYADDCLVQRAEQHRCYIVATCDK+LKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT
Sbjct:   41 KAKEAETNHVKQVPTAMFFAHNTALGPPYHVLIDTNFINFSIKNKLDIVKAMMDCLLAKAIPCVTDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHTGTYADDCLVQRAEQHRCYIVATCDKELKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 200

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A836CF02_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF02_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.010e-97
Identity = 133/160 (83.12%), Postives = 149/160 (93.12%), Query Frame = 0

Query:    1 KAKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 160
            KAKE ET  V Q P++MFF +NTALGPPYHV+VDTNFINFSIKNKLD+ K+MMDCLLAKA PCITDCV+AELEKLGPKYR+ALRL+KD RFQRLPCSH+GTYADDC++QRAEQHRCYIVATCDK+LKRRIRKI GVPIMYISNRK++IERM EAFGAPP+
Sbjct:   41 KAKEKETRQVTQTPSAMFFKYNTALGPPYHVIVDTNFINFSIKNKLDMVKSMMDCLLAKATPCITDCVIAELEKLGPKYRIALRLAKDERFQRLPCSHKGTYADDCILQRAEQHRCYIVATCDKELKRRIRKIAGVPIMYISNRKYTIERMPEAFGAPPS 200

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A812Y1D1_SYMMI (FCF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1D1_SYMMI)

HSP 1 Score: 278 bits (710), Expect = 2.410e-93
Identity = 127/160 (79.38%), Postives = 145/160 (90.62%), Query Frame = 0

Query:    1 KAKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 160
            KA++  + HV Q PT++FF HNT LGPPYHVLVDTNFINF+IKNKL+I K+MMDCLLAK IPCITDCV+AELEKLG KYR+ALRL+KDPRF+RLPCSH GTYADDCL+ R +QHRCYIVATCDKDLKRRIRK+PGVPIMYI++RKFS+ERM EAFGAP T
Sbjct:   39 KAQKEASRHVTQAPTALFFTHNTQLGPPYHVLVDTNFINFAIKNKLEIYKSMMDCLLAKCIPCITDCVMAELEKLGTKYRLALRLAKDPRFERLPCSHPGTYADDCLLHRCQQHRCYIVATCDKDLKRRIRKVPGVPIMYINSRKFSVERMPEAFGAPKT 198

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A397JSP6_9GLOM (PINc domain-containing protein n=2 Tax=Glomeromycetes TaxID=214506 RepID=A0A397JSP6_9GLOM)

HSP 1 Score: 266 bits (679), Expect = 2.490e-88
Identity = 118/156 (75.64%), Postives = 145/156 (92.95%), Query Frame = 0

Query:    3 KEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 158
            +++E  +V QV +S+FF +NTALGPPYHVLVDTNFINFSI+NKL++ +AMMDCL AK+IPCITDCV+AELEKLGPKYR+ALR+++DPRF+RLPC+H+GTYADDCLVQR  QH+CYIVATCD+DLKRRIRKIPG+PIMYIS RK++IER+ EA+GAP
Sbjct:   62 RKSEVRNVPQVASSLFFRYNTALGPPYHVLVDTNFINFSIQNKLELVQAMMDCLYAKSIPCITDCVMAELEKLGPKYRIALRIARDPRFERLPCTHKGTYADDCLVQRVMQHKCYIVATCDRDLKRRIRKIPGIPIMYISKRKYTIERLPEAYGAP 217

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A2T9YA09_9FUNG (PINc domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YA09_9FUNG)

HSP 1 Score: 262 bits (670), Expect = 1.620e-87
Identity = 117/163 (71.78%), Postives = 146/163 (89.57%), Query Frame = 0

Query:    2 AKEAETN----HVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 160
            AKE E+     H++Q  +S+FF +NTALGPPYH+++DTNFINFSI+NKL+I K+MMDCLLAK IPCITDCV+AELEKLGPKYR+ALR+++DPRF+RLPCSH+GTYADDC+VQR  QHRCYIVATCD+DLKRRIRK+ G+PIMYIS+ +++IER+ EA+GAP T
Sbjct:   18 AKETESKAVVRHIQQEASSLFFKNNTALGPPYHIIIDTNFINFSIQNKLEIMKSMMDCLLAKCIPCITDCVMAELEKLGPKYRIALRIARDPRFERLPCSHKGTYADDCIVQRITQHRCYIVATCDRDLKRRIRKVAGIPIMYISSHRYTIERLPEAYGAPKT 180

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: W2G0I5_PHYPR (PINc domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G0I5_PHYPR)

HSP 1 Score: 263 bits (673), Expect = 1.850e-87
Identity = 121/157 (77.07%), Postives = 142/157 (90.45%), Query Frame = 0

Query:    1 KAKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGA 157
            K KEAE   + Q+P++MFF +N+ALGPPY+VLVDTNFINFSIKNKL++  AMMDCLLAK+ PCITDCV+AELEKLG KYRVALRL+KDPRF+RLPC+H+GTYADDCLVQR +QHRCYIVATCD++LKRRIRK+PGVPIMYISNRK+ IER+ EA  A
Sbjct:   56 KRKEAEPKQIDQIPSNMFFKYNSALGPPYNVLVDTNFINFSIKNKLEVVSAMMDCLLAKSTPCITDCVMAELEKLGHKYRVALRLAKDPRFERLPCTHKGTYADDCLVQRVQQHRCYIVATCDRELKRRIRKVPGVPIMYISNRKYVIERLPEANAA 212

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A1Y1ZF27_9FUNG (Fcf1-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZF27_9FUNG)

HSP 1 Score: 260 bits (664), Expect = 2.280e-86
Identity = 119/163 (73.01%), Postives = 142/163 (87.12%), Query Frame = 0

Query:    1 KAKEAE-----TNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 158
            K KE E       H+ QV +S+FF +NTALGPPYHVLVDTNFINFSI+NKL++ K+MMDCL AK IPCITDCV+AELEKLGPKYRVALR+++DPRF+RLPC+H+GTYADDCLV R  QH+CYIVATCD+DLKRRIRKIPG+PIMYI+  K++IER+ EA+GAP
Sbjct:   32 KKKEEEKEKSLVTHIPQVASSLFFRYNTALGPPYHVLVDTNFINFSIQNKLELVKSMMDCLYAKCIPCITDCVMAELEKLGPKYRVALRVARDPRFERLPCAHKGTYADDCLVNRVMQHKCYIVATCDRDLKRRIRKIPGIPIMYIAQHKYTIERLPEAYGAP 194

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A1Y1W6E1_9FUNG (Fcf1-domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W6E1_9FUNG)

HSP 1 Score: 259 bits (662), Expect = 5.090e-86
Identity = 113/153 (73.86%), Postives = 140/153 (91.50%), Query Frame = 0

Query:    6 ETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 158
            + NHV++  ++MFF +NTALGPPYHV+VDTNFINFS++NKL++ + MMDCL AK IPCITDCV+AELEKLGPKYR+ALR+++DPRF+RLPC+H+GTYADDC+VQR  QHRCYIVATCDKDLKRRIRKIPGVPIM+I N K++IER+ +A+GAP
Sbjct:   42 QINHVQREASNMFFKYNTALGPPYHVIVDTNFINFSLQNKLELVRGMMDCLYAKCIPCITDCVLAELEKLGPKYRIALRVARDPRFERLPCTHKGTYADDCIVQRVNQHRCYIVATCDKDLKRRIRKIPGVPIMFIVNHKYTIERLPDAYGAP 194

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: UPI0009E60673 (rRNA-processing protein FCF1 homolog n=2 Tax=Scleractinia TaxID=6125 RepID=UPI0009E60673)

HSP 1 Score: 259 bits (661), Expect = 6.530e-86
Identity = 115/156 (73.72%), Postives = 139/156 (89.10%), Query Frame = 0

Query:    3 KEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 158
            ++ ET HV+Q  +++FF +NT LGPPY++LVDTNFINFSIKNKLDI K+MMDCL AK +PCITDCV+AELEKLG KYRVALR++KDPRF RLPC H+GTYADDC+V R +QH+CYIVATCD+DLKRRIRK+PGVPIMYIS  K++IERM +A+GAP
Sbjct:   39 EDNETRHVEQSSSALFFQYNTQLGPPYYILVDTNFINFSIKNKLDIVKSMMDCLYAKCVPCITDCVMAELEKLGSKYRVALRMAKDPRFDRLPCMHRGTYADDCIVNRIQQHKCYIVATCDRDLKRRIRKVPGVPIMYISQHKYTIERMPDAYGAP 194

[Close]

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Match: A0A397WAQ8_9GLOM (Fcf1-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397WAQ8_9GLOM)

HSP 1 Score: 258 bits (660), Expect = 8.960e-86
Identity = 118/155 (76.13%), Postives = 140/155 (90.32%), Query Frame = 0

Query:    3 KEAET-NHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAKAMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFG 156
            KE ET  +V QV +S+FF HN ALGPPYH+LVDTNFINFSI+NKL++ +AMMDCL AK IPCITDCV+AELEKLGPKYR+ALR+++DPRF+RLPCSH+GTYADDCLV+R  QH+CYIVATCDKDLKRRIRKIPG+PIMYIS RK++IER+ E +G
Sbjct:   38 KEKETIRNVPQVASSLFFRHNAALGPPYHILVDTNFINFSIQNKLELVQAMMDCLYAKCIPCITDCVMAELEKLGPKYRIALRVARDPRFERLPCSHKGTYADDCLVKRVMQHKCYIVATCDKDLKRRIRKIPGIPIMYISKRKYTIERLPENYG 192

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot

BLAST of mRNA_H-elongata_contig60353.13576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LB17_ECTSI	1.900e-111	96.25	PINc domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A836CF02_9STRA	4.010e-97	83.13	Fcf1-domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A812Y1D1_SYMMI	2.410e-93	79.38	FCF1 protein n=1 Tax=Symbiodinium microadriaticum ...	[more]
A0A397JSP6_9GLOM	2.490e-88	75.64	PINc domain-containing protein n=2 Tax=Glomeromyce...	[more]
A0A2T9YA09_9FUNG	1.620e-87	71.78	PINc domain-containing protein n=1 Tax=Smittium si...	[more]
W2G0I5_PHYPR	1.850e-87	77.07	PINc domain-containing protein n=7 Tax=Phytophthor...	[more]
A0A1Y1ZF27_9FUNG	2.280e-86	73.01	Fcf1-domain-containing protein n=1 Tax=Basidiobolu...	[more]
A0A1Y1W6E1_9FUNG	5.090e-86	73.86	Fcf1-domain-containing protein n=1 Tax=Linderina p...	[more]
UPI0009E60673	6.530e-86	73.72	rRNA-processing protein FCF1 homolog n=2 Tax=Scler...	[more]
A0A397WAQ8_9GLOM	8.960e-86	76.13	Fcf1-domain-containing protein n=2 Tax=Gigaspora T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002716	PIN domain	SMART	SM00670	PIN_9	coord: 29..128 e-value: 1.9E-11 score: 54.0
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 54..150 e-value: 2.2E-37 score: 127.4
None	No IPR available	GENE3D	3.40.50.1010		coord: 8..156 e-value: 6.1E-46 score: 158.1
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 3..156
None	No IPR available	PANTHER	PTHR12416:SF2	FCF1, RRNA-PROCESSING PROTEIN	coord: 3..156
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 27..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig60353	contig	H-elongata_contig60353:1274..2673 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig60353.13576.1	mRNA_H-elongata_contig60353.13576.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig60353 1274..2673 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig60353.13576.1 ID=prot_H-elongata_contig60353.13576.1|Name=mRNA_H-elongata_contig60353.13576.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
KAKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIAK
AMMDCLLAKAIPCITDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHQG
TYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIER
MAEAFGAPPT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002716	PIN_dom
IPR006984	Fcf1/Utp23
IPR029060	PIN-like_dom_sf