prot_H-elongata_contig60332.13574.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 6.160e-18 Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 15 WIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHKAQQTHVIIL 102
WIGDS ++ H T+D + +YN R P + + DG +L+ +C G++DVVFH R D +T+ D++ VPDL F+LVS + Q+TH ++L
Sbjct: 16 WIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCREDVLVTMKDIAVVPDLAFDLVSLNVIQETHDLLL 103
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 4.580e-13 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 11 RNDFWIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFH-----GRNDERMTLCDVSHVPDLKFNLVSFHKAQQTHVIIL 102
R FW DSGA+ + + +M+++R P GK I +GT LRVQC+G +++ FH G D R+ + DV VP + FNL S H Q+ I+L
Sbjct: 637 REKFWA-DSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGTYLRVQCVGKVNMAFHMQDQGGERDFRVQMSDVYVVPGITFNLFSLHHTQRKQRIVL 732
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A835CFI5_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A835CFI5_9FABA) HSP 1 Score: 57.8 bits (138), Expect = 1.570e-7 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
Query: 15 WIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVS-------------FH------KAQQTHVIIL 102
W DSGAS H+TNDAS + VR P G+ + T++GT L +Q +G ++ N + + L + HVP + NL+S FH K+Q+TH ++L
Sbjct: 310 WYPDSGASSHLTNDASNL-QVRQPYNGQELVHTANGTGLPIQSVGYSNI--SSSNSQILHLSQLYHVPSVSKNLISVSKFAKDNRVYFEFHANEFSIKSQETHQVLL 413
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A803LD36_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LD36_CHEQI) HSP 1 Score: 55.5 bits (132), Expect = 9.740e-7 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0
Query: 13 DFWIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHK 93
D W+ DSGA+ H+ +D + ++ TP L + I DG+R+ V+ G + + NDE ++L +V HVPD KFNL+S HK
Sbjct: 275 DKWLLDSGATDHIFSDIA-LFAKLTPVLTPYYITIPDGSRILVKNTGVVKL-----NDE-ISLLNVLHVPDFKFNLISVHK 348
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A834U2Q9_9FABA (F-box protein interaction domain protein n=1 Tax=Senna tora TaxID=362788 RepID=A0A834U2Q9_9FABA) HSP 1 Score: 55.5 bits (132), Expect = 1.040e-6 Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 12 NDFWIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHKAQQ 96
ND WI DSGAS HMT +AS +++ P ++ +DGT +V IG++ + + +TL +V HVP L NL+S K Q
Sbjct: 92 NDSWIVDSGASDHMTGNAS-LFSTLGPCKTSLQVKIADGTMAKVLGIGSVKI------SDTITLLNVLHVPTLACNLLSISKLTQ 169
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A7D9IJR2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IJR2_PARCT) HSP 1 Score: 54.7 bits (130), Expect = 1.710e-6 Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 0
Query: 1 MTFAAQSQDARNDFWIGDSGASCHMTNDAS---KMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLC---DVSHVPDLKFNLVSFHKAQQT 97
+ A S + R + WI DSGA+CHM NDAS K++N+ P ++ +DG ++ G + N ++ C DV +VP L NLVS KA ++
Sbjct: 41 VNHAFSSVNGRTNTWIIDSGATCHMCNDASQFVKLHNLEKP----EDVTLADGHVVKATGRGVVKTKIESPNGQKGKSCVLQDVLYVPSLSNNLVSVSKATKS 139
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A2I0VFZ4_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VFZ4_9ASPA) HSP 1 Score: 54.3 bits (129), Expect = 2.630e-6 Identity = 30/89 (33.71%), Postives = 46/89 (51.69%), Query Frame = 0
Query: 5 AQSQDARNDFWIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHK 93
A S A N+ W DSGAS H+TN + ++ +P G I DG + + G + R ++TL + H+P+LK+NL+S K
Sbjct: 309 AASDSATNNNWFLDSGASAHLTNSLDNL-SIASPYQGSDSITIGDGRSMSIANSGTGSLPIPAR---KLTLDQILHIPELKYNLLSISK 393
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A834WYN7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WYN7_9FABA) HSP 1 Score: 53.5 bits (127), Expect = 4.710e-6 Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 15 WIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHKAQQ 96
W DSGAS H+TNDAS +++ P G ++ ++GT L + +G ++ H + + ++L ++ HVP + NL+S K Q
Sbjct: 322 WYPDSGASHHITNDASNLHS-HQPYTGSEQVHAANGTGLVIHNVGQSEI--HTNSSKILSLKNLFHVPSVTKNLLSVSKCAQ 400
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A834T3C8_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T3C8_9FABA) HSP 1 Score: 52.4 bits (124), Expect = 1.120e-5 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
Query: 15 WIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDGTRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHKAQQ 96
WI DSGAS HMT +AS +++ P ++ +DGT +V IG+I + +TL +V +VP L NL+S K Q
Sbjct: 74 WIVDSGASDHMTGNAS-LFSTLAPCASSLQVKIADGTMAKVSAIGSIKI------STTLTLMNVLYVPALACNLLSISKLTQ 148
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Match: A0A834WRC4_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WRC4_9FABA) HSP 1 Score: 52.4 bits (124), Expect = 1.220e-5 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
Query: 15 WIGDSGASCHMTNDASKMYNVRTPPLGKHEIMTSDG--TRLRVQCIGNIDVVFHGRNDERMTLCDVSHVPDLKFNLVSFHK 93
W DSGAS H+TNDA+ + + G + T++G T L + +GN +V H +N + + L D+ HVP + NL+S K
Sbjct: 320 WYPDSGASSHLTNDATNLQEQQAY-TGPDTVHTANGNATGLSISTVGNSEV--HTQNHKSLLLKDLYHVPSISKNLISVSK 397 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60332.13574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig60332.13574.1 ID=prot_H-elongata_contig60332.13574.1|Name=mRNA_H-elongata_contig60332.13574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bpback to top |