prot_H-elongata_contig60322.13571.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60322.13571.1
Unique Nameprot_H-elongata_contig60322.13571.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length300
Homology
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 8.820e-131
Identity = 196/271 (72.32%), Postives = 221/271 (81.55%), Query Frame = 0
Query:    1 SSAADFESGGCATLTDMYNIQSGSGPLYTLDDDDNIVDGGGGSV--TGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDD---TCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIY 266
            S ++ F  GGCATLTDMYN QSGSGPLY LD  +NIV GGGGS   TG WLLT  L +LD VTLY+HGTS GGD DVLRI+STDD F E+RG+GGSLSF  TTVTSWDTD G ERT Y  GRSFINCV++  +DD    +C G ++K+ GEC MDIIDS MGN+G++D+ESYGLTWKVRG C+D SN E+ D  NVYGDI+GSEIYGMYYGMYSYGH+GG WTDNVMRDNI YGFDPHDD+D+L IA N VYGNGNHGIIASKRCNNVEIY
Sbjct:  405 SDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQ--FDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY 673          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 5.060e-128
Identity = 193/302 (63.91%), Postives = 229/302 (75.83%), Query Frame = 0
Query:    4 ADFESGGCATLTDMYNIQSGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSE----QTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKS------NPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHGEL 295
            A FE GGC TLT MY  Q G GPLY LD+++++V   GG+ TG WLL  +LRV+D  TL +HGT+  GD DVLR+ ST D F EVRGYGG+L F+STTVTSWDTD+G ER    DGRSFINCV++      WD   CDG ++++ GEC MDII S MGN+G++D+ESYGLTWKVRG C          N E+F+  NVYGDI  SEIYGMYYG YSYGH+GG W  N+MRDNIQYGFDPHDD+D+L I+NN VYGNGNHGIIASKRCNNV+I+ NEVYDGG++AVGIFLHRSSD A VH  +
Sbjct:  191 AYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVV---GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWD---CDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNV 486          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 5.810e-116
Identity = 177/297 (59.60%), Postives = 217/297 (73.06%), Query Frame = 0
Query:    4 ADFESGGCATLTDMY------NIQSGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDT-FHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHG 293
            A+ + GGC TL+D+Y      N  +  GP++ LD +D  VD    + TG+WLLT DL V    TLY  G  +GG+C  LRI ST  + F E+RG+GG+L F+ T VTSWD D    + +Y DGRSFI CVSE    +DTC   A  +MGEC MDIIDS MG LGY  SE+YG+TWKVRG+C+D SNP+VFD  NVYGD++GS+I+ MYYGMYS+GH+GG WT+N+M DN QYGFDPHDD+D LIIA N+VY N NHGIIASKRCNNV+IY NEVYDGG +A GIFLHRS DD+ V+G
Sbjct:    4 AEGDGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDR-VDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYG 296          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 2.270e-113
Identity = 183/290 (63.10%), Postives = 212/290 (73.10%), Query Frame = 0
Query:    9 GGCATLTDMYNIQSG---SGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDT-FHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDD-DTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHG 293
            GGCATLTD+Y  Q G    GPL+ LD +DN+V   GGS TG WLL  D+ V +   L +HG   GGD  VLRI+ST    ++E+RG+GGSLSF  T VTSWDTD     T+Y   RSFI CVSE+  D  DTCDG A   MGEC MDII S MG +GY  +ESYG++WKVRGYC++  NPEVF+RT V GDI  S+IYGMYYG YS+GH+GG WT N M DN QYGFDPHDD+DNL IA N V+GNGNHGIIASKRCNNV+I+ N VYDGG+ AVGIFLHRSSDD  V G
Sbjct:  405 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVV---GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWG 691          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 7.000e-110
Identity = 177/292 (60.62%), Postives = 212/292 (72.60%), Query Frame = 0
Query:    7 ESGGCATLTDMYNIQ------SGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIEST-DDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALV 291
            E  GC T+TD+YN +      S  GP+Y LDDD   +D   G +T  WLL  +L +      Y  GTS GGDC+ LRI+ST  D FHEVRG+GGSL F+ T VTSWDT +   + +Y +GRSF+NCVSE+   DD C+G A  +MGEC MDII+S +  LGY+DSESYG+TWKVRG+C D SNPEVF+ TNVYGD+ GS+I+ +YYG YSYGH+GG WT+N M DN QYGFDPHDD+D L IA NEVY N NHGIIASKRCNNV+I+ NEV DGG  A GIFLHRSSD A V
Sbjct:  445 EGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSG-ITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDD-CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAV 734          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 1.580e-105
Identity = 163/286 (56.99%), Postives = 202/286 (70.63%), Query Frame = 0
Query:    9 GGCATLTDMYNIQSGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDD-TCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHG 293
            GGC TL  ++  ++G GPLY +D D   V     S TG WLLT +L V D +TL ++G+  GGD D LR+ ST++TF  +R +GGSL F ST V SWDT + S     +DGRS+I+ +SE   D+D TC+G A   MGE  MDI  S +G LGY+DSESYGLTWKVRG+C DKSNPEVFD  NVYG++  S+I+ M +G+Y+YGH+ G+W  N M DN  YGFDPHDD+D L I +NEVY NG HGIIASKRCN V I GNEVY G + + GIFLHRSSDDA+V G
Sbjct:   67 GGCVTLGQIWESRAGKGPLYAVDPDSGNVST---SATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 3.850e-104
Identity = 163/286 (56.99%), Postives = 202/286 (70.63%), Query Frame = 0
Query:    9 GGCATLTDMYNIQSGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDD-TCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHG 293
            GGC TL  ++  ++G GPLY +D D   V     S TG WLLT +L V D +TL ++G+  GGD D LR+ ST++TF  +R +GGSL F ST V SWDT + S     +DGRS+I+ +SE   D+D TC+G A   MGE  MDI  S +G LGY+DSESYGLTWKVRG+C DKSNPEVFD  NVYG++  S+I+ M +G+Y+YGH+ G+W  N M DN  YGFDPHDD+D L I +NEVY NG HGIIASKRCN V I GNEVY G + + GIFLHRSSDDA+V G
Sbjct:   67 GGCVTLGQIWESRAGKGPLYAVDPDSGNVST---SATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 8.390e-104
Identity = 167/297 (56.23%), Postives = 205/297 (69.02%), Query Frame = 0
Query:    5 DFESGGCATLTDMYNIQ-----SGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDT-FHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHGEL 295
            D E  GC T+TD+YN +     S  GP++ LDD  N V      ++ +WLLT +L +      Y  G+SIGGDCD LRI+ST  T FHEVR +GGS+ F+ST VTSWDT + + + +Y  GRSF+NCVSE+   +  C G A  +MGEC MDII+S +G LGY+DSESYGLTWKVRG+C D SNP+VFD TNVYG++ GS+I+  YYG YSYGH+GG W +N M DN QYGFDPHDD+D L              IIASKRCNNV+IY NEVYDGG  A GIFLHRSSD A+VH  +
Sbjct:   81 DAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPK-VLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGE-VCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNV 363          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 1.960e-102
Identity = 170/305 (55.74%), Postives = 208/305 (68.20%), Query Frame = 0
Query:    5 DFESGGCATLTDMYNIQ------SGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIESTD-DTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWKVR---------GYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHG 293
            D ES GC TLTD+YN +      S  GPLY LD   + +     SVT +WLL  +L V +    Y  G+  GGDCD LRI+ST  D ++EVRG+GGS+ F  T VTSWDT +   + +Y  GRSF+NCVSE+   + TCDG A  DMGEC MDII+S MG +G++DSESYGLTWKVR         G+C D SNP+VF+ TNVYGDI+ S+I+ MYYG YSYGH+GG WT+N M DN QY            +ANN+VY N NHGIIASKRCNNV+IY N+V DGG +AVGIFLHRSSD+A V+G
Sbjct:   16 DAESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPT-SVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGE-TCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYG 306          
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 2.450e-101
Identity = 166/293 (56.66%), Postives = 199/293 (67.92%), Query Frame = 0
Query:   14 LTDMYNIQ------SGSGPLYTLDDDDNIVDGGGGSVTGRWLLTMDLRVLDDVTLYMHGTSIGGDCDVLRIEST-DDTFHEVRGYGGSLSFKSTTVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMDIIDSVMGNLGYYDSESYGLTWK--------VRGYCTDKSNPEVFDRTNVYGDIQGSEIYGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNGNHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALV 291
            +TD+YN +      S  GP+Y LDDD   +D   G +T  WLL  +L +      Y  GTS GGDC+ LRI+ST  D FHEVRG+GGSL F+ T VTSWDT +   + +Y  GRSF+NCVSE+   DD C+G A  +MGEC MDII+S +  LGY+DSESYG+TWK        VRG+C D SNPEVFD TNVYGD+ GS+I+ +YYG YSYGH+GG WT+N M DN QYGFDPHDD+D L              IIASKRCNNV+I+ NEV DGG  AVGIFLHRSSDDA V
Sbjct:    1 MTDLYNFRGTEKDGSSKGPVYMLDDDGTKLDIPSG-ITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDD-CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAV 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60322.13571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE8_ECTSI8.820e-13172.32Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G8D9_ECTSI5.060e-12863.91Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FRR8_ECTSI5.810e-11659.60Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE2.270e-11363.10MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LC73_ECTSI7.000e-11060.62Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FXE5_ECTSI1.580e-10556.99Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI3.850e-10456.99Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI8.390e-10456.23Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE1.960e-10255.74MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KWQ2_9PHAE2.450e-10156.66MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 190..211
e-value: 3400.0
score: 3.4
coord: 260..284
e-value: 56.0
score: 12.6
coord: 236..258
e-value: 5.5
score: 16.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 14..295
e-value: 1.7E-70
score: 239.8
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 195..288
e-value: 6.8E-9
score: 35.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 48..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60322contigH-elongata_contig60322:1866..3512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60322.13571.1mRNA_H-elongata_contig60322.13571.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60322 1866..3512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60322.13571.1 ID=prot_H-elongata_contig60322.13571.1|Name=mRNA_H-elongata_contig60322.13571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp
SSAADFESGGCATLTDMYNIQSGSGPLYTLDDDDNIVDGGGGSVTGRWLL
TMDLRVLDDVTLYMHGTSIGGDCDVLRIESTDDTFHEVRGYGGSLSFKST
TVTSWDTDSGSERTSYSDGRSFINCVSEQTWDDDTCDGAASKDMGECTMD
IIDSVMGNLGYYDSESYGLTWKVRGYCTDKSNPEVFDRTNVYGDIQGSEI
YGMYYGMYSYGHEGGEWTDNVMRDNIQYGFDPHDDTDNLIIANNEVYGNG
NHGIIASKRCNNVEIYGNEVYDGGDEAVGIFLHRSSDDALVHGELRSCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence