prot_H-elongata_contig60205.13556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60205.13556.1
Unique Nameprot_H-elongata_contig60205.13556.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig60205.13556.1 vs. uniprot
Match: D7FRM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 2.350e-90
Identity = 145/197 (73.60%), Postives = 167/197 (84.77%), Query Frame = 0
Query:    1 MYFACRIFNVVGTSNSKAFATVKKGHNLLHLLLSMLAWCVRCTDPPFPGGEDRLKLMVQVLQGLFLLGARLTTEEKNKNKAALEGENMKRLGYVLVDILHLDHQHLDAFMAKLQALNLMLDMPDSFAEVLIEYGCLPRILQILELQLVRQAYREGGGIDAAAELTPALLVLNKIVLASEKSRTAVKAAIFPPEADAV 197
            +YFACRIFNVVG+SN  AF  +KK  +LL LLLS+LA CVRCT PPFPGGEDR+KLMVQ LQGLFLLG R T EEK K   ALEG+ MKRLGYVLVDILHLDH  +D FMAKLQ LNL+LDMP  FAEVL+E+GCLPR++Q++ELQLVRQ +++GG +DAAAELTP LLVLNK+VLASE+S+ AVK AIFPPEAD V
Sbjct:  166 LYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQEEKKK---ALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGG-VDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEV 358          
BLAST of mRNA_H-elongata_contig60205.13556.1 vs. uniprot
Match: A0A7S2XIN1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIN1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.660e-16
Identity = 54/182 (29.67%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   22 VKKGHNLLHLLLSMLAWCVRCTDPPFPG---GEDRLKLMVQVLQGLFLL-GARLTTEEKNKNKAALEG---ENMKRLGYVLVDILHLDHQHLDAFMAKLQALNLMLDMPDSFAEVLIEYGCLPRILQILELQLVRQAYREGGGIDA-AAELTPALLVLNKIVLASEKSRTAVKAAIFPPEAD 195
            VK G ++  +L+  L W ++ ++P FPG    + R  L +++L+ L+ L   ++   ++       E    +NMK++G +L  IL+L +++   +  KL A+NL++D P  +A++L+  G +P +L IL+LQ+ +    EGG   + A  + P L V+N+   A+   +  VK  +FP   D
Sbjct:  341 VKGGTDITSVLVETLTWTIK-SEPSFPGDASSDRRADLALEILRVLYALRNGQIAGSQRGSFSEIQEKRIEDNMKKMGALLCAILNLPNENKQVYDVKLAAINLLMDAPIEYAQILLTNGNIPSLLMILDLQVTKVVVEEGGAKTSNATSIIPILAVMNRFSAANPCIQNIVKEDVFPTNHD 521          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60205.13556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRM4_ECTSI2.350e-9073.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XIN1_9STRA4.660e-1629.67Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60205contigH-elongata_contig60205:238..2960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60205.13556.1mRNA_H-elongata_contig60205.13556.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60205 211..2960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60205.13556.1 ID=prot_H-elongata_contig60205.13556.1|Name=mRNA_H-elongata_contig60205.13556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
MYFACRIFNVVGTSNSKAFATVKKGHNLLHLLLSMLAWCVRCTDPPFPGG
EDRLKLMVQVLQGLFLLGARLTTEEKNKNKAALEGENMKRLGYVLVDILH
LDHQHLDAFMAKLQALNLMLDMPDSFAEVLIEYGCLPRILQILELQLVRQ
AYREGGGIDAAAELTPALLVLNKIVLASEKSRTAVKAAIFPPEADAV
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