prot_H-elongata_contig60202.13555.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60202.13555.1
Unique Nameprot_H-elongata_contig60202.13555.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: D8LDG7_ECTSI (Putative ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG7_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.760e-72
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            IF+SWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLA+DGLPPKREVVVYAGMTS QR +YDL  RNALRQAL+DM  EG +R+SE+N  MNQRKVCQHPFLFGEPKDK+TGEYVG+K PE+
Sbjct:  438 IFRSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLAGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEI 573          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A6H5KPB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB1_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.940e-72
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            IF+SWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRR+KKDVLA+DGLPPKREVVVYAGMTS QR +YDLV RNALRQAL+DM  EG +R+SE+N  MNQRKVCQHPFLFGEPKDK+TGEYVG+K PE+
Sbjct:  490 IFRSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRIKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEI 625          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A835Z5K9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K9_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.440e-51
Identity = 83/135 (61.48%), Postives = 111/135 (82.22%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPE 135
            +F+SWFGF+NIGK+ SV+ IV +++ + +VS+LHEILRPFL+RR+K+DVL ++ +PPKREV+VYAGMT LQR++Y LVE   LR  L ++  EG + +S++N  MNQRKVCQHP+LFGEP+DK TGEYVGV  PE
Sbjct:  212 VFRSWFGFRNIGKDISVDQIVSDEEQANVVSQLHEILRPFLLRRLKRDVLQNE-MPPKREVLVYAGMTRLQRTYYSLVEAGTLRDTLCELGIEGAADISQINSNMNQRKVCQHPYLFGEPRDK-TGEYVGVSNPE 344          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A835ZBT7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.060e-46
Identity = 77/135 (57.04%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPE 135
            +F+SWF F  IGK+ +V+ I+ E+Q +K+V++LHEILRPFL+RR+K+DVL  + +PPK E+VVYAGMT LQR++Y LVE   LR+ L+++  EG + +S++N  MN RKVCQHP+LFGEP+DK +GEYVG   PE
Sbjct:  315 VFRSWFRFGTIGKDVTVDKIISEEQQAKVVTRLHEILRPFLLRRLKRDVLQVE-IPPKCEIVVYAGMTRLQRTYYSLVETGTLRETLLELGIEGAAEISQINISMNLRKVCQHPYLFGEPRDK-SGEYVGTTNPE 447          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A7R9U2J9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.650e-45
Identity = 78/143 (54.55%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKE-----TSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPV--MNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            +FQSWFGF+NIG++     TSVE I+DE+++S+IVSKLH+ILRPFL+RR+K+DVL  D +PPKRE+VVY GM+SLQ+ +Y L ++  LRQAL+D+  EG  ++ + +    M+ R++CQHPFL GEPKD +T  Y+GV+ P +
Sbjct:  399 VFQSWFGFRNIGRKKSAAATSVEDILDEEENSRIVSKLHDILRPFLLRRLKRDVL-KDLVPPKREIVVYCGMSSLQQEYYTLCQKKKLRQALIDIGIEGAQQMPDSSGPGGMSLRRICQHPFLLGEPKDPVTNAYIGVQNPNL 540          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A7S3M2I2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2I2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.880e-43
Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGE 127
            +FQSWF FKNIGK+T VE I+  ++  +IV+K+HEILRPF++RR+K + L  D LPPKREVVVY GM+SLQR +Y  V    LR++LV++  EG  ++S++N +MNQRKVC HPFLFG+  D  TGE
Sbjct:  295 VFQSWFDFKNIGKDTKVEDILSTEEQDRIVTKMHEILRPFVLRRIKTETLG-DKLPPKREVVVYCGMSSLQREYYARVLSGTLRESLVEVGVEGAKKISQINMLMNQRKVCNHPFLFGDLLDASTGE 420          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A6U1QEQ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEQ7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.160e-43
Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPE 135
            +FQSWFGF+NIGK+T V  I+DE+  ++IV+KLHEILRPFL+RR+K++VL    +PPK+E+VVYA M+ LQR FY LV++ +LR  L     EG   +S++N  MN RKVC HPFLFGEPK    G Y+G   PE
Sbjct:  412 VFQSWFGFRNIGKDTQVSDIIDEEHKNRIVTKLHEILRPFLLRRLKQNVLVD--MPPKKELVVYAPMSQLQRDFYALVQKGSLRDVLTTWGIEGAKGISQINDCMNLRKVCNHPFLFGEPKTN-EGVYLGEANPE 543          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A7S0BX46_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX46_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.650e-39
Identity = 70/140 (50.00%), Postives = 99/140 (70.71%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKE----TSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            +FQSWFGF++IG      TS + I+ EQQ +  V+KLHEILRPFL+RR+K+DVL    LPPK+EVV+Y+GM+ LQ  + DL+E+  +RQ L++    G S++S+ N  MN RK   HPFLFGEP D ++G ++G   P++
Sbjct:   67 VFQSWFGFRDIGSSKQGGTSEDDILAEQQQNSTVTKLHEILRPFLLRRIKRDVLTD--LPPKKEVVIYSGMSKLQSGYADLIEKGTIRQILMNQGISGASKLSQTNKQMNHRKNSNHPFLFGEPIDSVSGLHLGTAHPQL 204          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A7S2K5C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5C2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.890e-39
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            +FQSWFGFK IG++T  + +++ Q+  + V+KLH ILRPFL+RRMKKDVL    +PPK+EVVVYAGM+ LQ  + D +E   L++ L+    E G  +S+ N +MN RK   HPFLFGEP D  TG ++G   P++
Sbjct:  243 VFQSWFGFKGIGQQTKEDEVLEAQRRDQTVTKLHSILRPFLLRRMKKDVLKD--MPPKKEVVVYAGMSKLQLGYMDQIEAGTLKEMLLAQGIETGKSLSQTNKMMNHRKNANHPFLFGEPIDPNTGIHMGTAHPQL 376          
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Match: A0A7S0UK64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UK64_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.110e-38
Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 0
Query:    1 IFQSWFGFKNIG----KETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVLASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSEMNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV 136
            +FQSWFGFK+IG    K TS E I+ EQ+ +K V+KLHEILRPFL+RR+K DVL    +PPK+EVVVY+GM+ LQ  + DL+E+  LR  L+         +S+ N +MNQRK   HPF+FGEP D  TG ++G   P++
Sbjct:  112 VFQSWFGFKDIGQKSHKGTSEEDIMLEQRKNKTVTKLHEILRPFLLRRVKVDVLKE--MPPKKEVVVYSGMSKLQLGYADLIEKGVLRDELLRQGIADARNLSQTNKMMNQRKNVNHPFMFGEPLDPSTGTHIGTIYPQL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60202.13555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDG7_ECTSI1.760e-7285.29Putative ATP-dependent helicase YFR038W n=1 Tax=Ec... [more]
A0A6H5KPB1_9PHAE1.940e-7285.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5K9_9STRA2.440e-5161.48SNF2 family N-terminal domain-containing protein n... [more]
A0A835ZBT7_9STRA3.060e-4657.04P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7R9U2J9_9STRA4.650e-4554.55Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3M2I2_9STRA2.880e-4357.48Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A6U1QEQ7_9STRA5.160e-4356.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0BX46_9STRA1.650e-3950.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2K5C2_9STRA4.890e-3950.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S0UK64_9STRA1.110e-3851.43Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 22..55
e-value: 1.6E-17
score: 65.1
NoneNo IPR availableGENE3D3.40.50.300coord: 56..127
e-value: 1.6E-17
score: 65.1
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..124
NoneNo IPR availablePANTHERPTHR10799:SF923HELICASE, LYMPHOID-SPECIFICcoord: 2..124
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 23..116
e-value: 2.6E-12
score: 46.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60202contigH-elongata_contig60202:1673..3279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60202.13555.1mRNA_H-elongata_contig60202.13555.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60202 1673..3279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60202.13555.1 ID=prot_H-elongata_contig60202.13555.1|Name=mRNA_H-elongata_contig60202.13555.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
IFQSWFGFKNIGKETSVESIVDEQQHSKIVSKLHEILRPFLIRRMKKDVL
ASDGLPPKREVVVYAGMTSLQRSFYDLVERNALRQALVDMDFEGGSRVSE
MNPVMNQRKVCQHPFLFGEPKDKLTGEYVGVKTPEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase