prot_H-elongata_contig60013.13534.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60013.13534.1
Unique Nameprot_H-elongata_contig60013.13534.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: D8LIP8_ECTSI (RING-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIP8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 2.400e-31
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MTVHTHRVGAMPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            MTV THR GA+PL G+ES GTI+IQY FPSGTQ  +HPN G  YHGTSRTAYLPDN  GREVL+L +KSF+QRMTFT
Sbjct:  289 MTVRTHRRGAIPLSGYESDGTILIQYSFPSGTQSSKHPNPGSAYHGTSRTAYLPDNAAGREVLALLRKSFEQRMTFT 365          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A7S2XY22_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY22_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.430e-27
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MTVHTHRVGAMPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            M V    VG  PL GHE+ GTI I Y FPSGTQGP+HPN G  YHGTSR A+LPD PEG E+L L Q  FD+++TFT
Sbjct:   33 MQVDRAPVGGCPLAGHEAHGTIFISYQFPSGTQGPQHPNPGRPYHGTSRFAFLPDTPEGNEMLRLLQICFDRKLTFT 109          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A671Y6X3_SPAAU (E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671Y6X3_SPAAU)

HSP 1 Score: 99.8 bits (247), Expect = 1.490e-24
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 0
Query:   11 MPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            + L G E  GTIVI YYFP G Q  RHPN G RYHGTSRTAYLPDN EG+EVL L QK+F+Q++ FT
Sbjct:   78 LSLPGFEGYGTIVISYYFPDGKQTERHPNPGQRYHGTSRTAYLPDNKEGKEVLHLLQKAFNQKLIFT 144          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: C3Y3J1_BRAFL (E3 ubiquitin-protein ligase (Fragment) n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y3J1_BRAFL)

HSP 1 Score: 96.7 bits (239), Expect = 1.610e-23
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0
Query:   13 LQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            L G+E+ GTIVI YYF SGTQGP HPN GH + GTSRTAYLP+N EGRE + L +++FD R+ FT
Sbjct:   64 LPGYENYGTIVINYYFSSGTQGPDHPNPGHHFSGTSRTAYLPNNEEGREFVQLLKRAFDNRLVFT 128          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: UPI0016020830 (probable E3 ubiquitin-protein ligase DTX3 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016020830)

HSP 1 Score: 94.7 bits (234), Expect = 2.650e-23
Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    5 THRVGAM-PLQGHE-----SVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            THR+  +  L G+E     S+ TI I YYFP GTQGP HPN G  Y GTSRTAYLPDN EGREVL L +++FD R+ FT
Sbjct:    2 THRIDYLHSLPGYEYMNCRSIATIEIHYYFPDGTQGPEHPNPGKPYTGTSRTAYLPDNAEGREVLRLLKQAFDSRLVFT 80          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A6P8HJI7_ACTTE (E3 ubiquitin-protein ligase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HJI7_ACTTE)

HSP 1 Score: 96.3 bits (238), Expect = 6.680e-23
Identity = 46/76 (60.53%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    2 TVHTHRVGAMPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            T+H      + L G+E  GT+ I Y FPSG QGP HPN G RY GTSRTAYLPD  EGREVL L QK+F+ R+TFT
Sbjct:  122 TMHHSLEPYLRLPGYERYGTVRIDYNFPSGKQGPEHPNPGQRYSGTSRTAYLPDCSEGREVLDLLQKAFNARLTFT 197          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A671YA38_SPAAU (E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671YA38_SPAAU)

HSP 1 Score: 95.5 bits (236), Expect = 8.040e-23
Identity = 44/67 (65.67%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   11 MPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            + L G E  GTIVI YY PSG Q  RHPN G RY GTSRTAYLPDN EG+EVL L QK+F+Q++ FT
Sbjct:   86 LSLPGFEDCGTIVIDYYLPSGEQTERHPNPGQRYDGTSRTAYLPDNKEGKEVLHLLQKAFNQKLIFT 152          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: UPI0011C0D1F1 (E3 ubiquitin-protein ligase DTX3L-like isoform X1 n=3 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D1F1)

HSP 1 Score: 99.8 bits (247), Expect = 1.060e-22
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 0
Query:   11 MPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            + L G E  GTIVI YYFP G Q  RHPN G RYHGTSRTAYLPDN EG+EVL L QK+F+Q++ FT
Sbjct:  711 LSLPGFEGYGTIVISYYFPDGKQTERHPNPGQRYHGTSRTAYLPDNKEGKEVLHLLQKAFNQKLIFT 777          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A835ZAV4_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.070e-22
Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 0
Query:   11 MPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            M   G+   GTIVI Y F SG QGP+HP+ G RY GTSR AYLPD P+GR VL+L Q+ FDQR+TFT
Sbjct:   28 MHCSGYAGAGTIVINYAFSSGIQGPKHPHPGQRYSGTSRVAYLPDTPDGRAVLALLQRCFDQRLTFT 94          
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Match: A0A671YA43_SPAAU (E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671YA43_SPAAU)

HSP 1 Score: 95.9 bits (237), Expect = 1.310e-22
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0
Query:   13 LQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRTAYLPDNPEGREVLSLFQKSFDQRMTFT 77
            L G E  GTIVI YY PSG Q  RHPN G RYHGTSRTAYLPDN EG+EVL L +++F+Q++ FT
Sbjct:  124 LPGFEDCGTIVIDYYIPSGKQTERHPNPGQRYHGTSRTAYLPDNKEGKEVLRLLRRAFNQKLIFT 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60013.13534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP8_ECTSI2.400e-3174.03RING-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
A0A7S2XY22_9STRA7.430e-2762.34RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A671Y6X3_SPAAU1.490e-2467.16E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata ... [more]
C3Y3J1_BRAFL1.610e-2364.62E3 ubiquitin-protein ligase (Fragment) n=3 Tax=Bra... [more]
UPI00160208302.650e-2359.49probable E3 ubiquitin-protein ligase DTX3 n=1 Tax=... [more]
A0A6P8HJI7_ACTTE6.680e-2360.53E3 ubiquitin-protein ligase n=1 Tax=Actinia tenebr... [more]
A0A671YA38_SPAAU8.040e-2365.67E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata ... [more]
UPI0011C0D1F11.060e-2267.16E3 ubiquitin-protein ligase DTX3L-like isoform X1 ... [more]
A0A835ZAV4_9STRA1.070e-2262.69RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A671YA43_SPAAU1.310e-2266.15E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039396Deltex, C-terminalPFAMPF18102DTCcoord: 9..77
e-value: 1.2E-25
score: 90.2
IPR039399Deltex, C-terminal domain superfamilyGENE3D3.30.390.130coord: 1..77
e-value: 6.0E-27
score: 96.3
NoneNo IPR availablePANTHERPTHR12622:SF36coord: 1..77
IPR039398Deltex familyPANTHERPTHR12622DELTEX-RELATEDcoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60013contigH-elongata_contig60013:1894..3054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60013.13534.1mRNA_H-elongata_contig60013.13534.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60013 1873..3054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60013.13534.1 ID=prot_H-elongata_contig60013.13534.1|Name=mRNA_H-elongata_contig60013.13534.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MTVHTHRVGAMPLQGHESVGTIVIQYYFPSGTQGPRHPNTGHRYHGTSRT
AYLPDNPEGREVLSLFQKSFDQRMTFT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039396Deltex_C
IPR039399Deltex_C_sf
IPR039398Deltex_fam