mRNA_H-elongata_contig5998.13529.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5998.13529.1
Unique NamemRNA_H-elongata_contig5998.13529.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: D7FLW6_ECTSI (RNA methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW6_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 3.780e-95
Identity = 192/429 (44.76%), Postives = 239/429 (55.71%), Query Frame = 3
Query:    3 GYYNTRYGCEPASAT---------DNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADRE---------DFDSGGYNNALNNGVAFATGHPD-----LLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKV------RRGE----SNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLD--------------DAEEDT---FLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            GYYNTRYG + + A+              AG RDPR+ +++RSWFEGKKCLDVGCNEGHLTLA+VR FRPRRMVG+DID YLV+ AR+ L+ EIN+A    K    R          + D G    A     +     PD        S P +  +  G   A   +      E   +VP +       R+G     S  V   + R G         S++ G E     + +D +   KP      S+S   +G  DA     T  +   +              DA  D     L+GC V FR EDFV EAH   GYD VCLFSVVKWMH+NGGD+A++GVFRKT+ LLRPGGRLILEPQPWK+YRKSARQHG+ +A      I++RP DF A+LTGEVGFRSWEE+G+P EGVG FAKRS+HVF+K
Sbjct:   38 GYYNTRYGIDGSGASAXXXXXXXXXXXXXAGARDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRTFRPRRMVGLDIDSYLVRRARKELSMEINAAAHAGKSTEFRPLMPRSLRGGEDDVGDEEQATPATASIPVARPDEEAHGADSSTPKLKANAGGEGDASGVSGGARSTEPEVHVPGRKNECRDSRKGSVGAASESVALPESRGGGTTGGAAAGSTSVGTEIDPVRKDRDTR---KPVATVGGSLSDTHEGGNDATADDTTSGSTVAEAATVVAVAAAGVVADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGLPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 463          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A2D4C8W2_PYTIN (RNA methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8W2_PYTIN)

HSP 1 Score: 145 bits (366), Expect = 2.240e-35
Identity = 114/346 (32.95%), Postives = 148/346 (42.77%), Query Frame = 3
Query:   75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAR---------EALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPL--VPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
            DPRL +L + WF GK+ LDVGCN G LT+AI ++F P  ++G+D+D  L+  AR         E L G + +   +A R  D  D        A ++    A  H +   S  +  VP S +   T   +      K SA  V  KV                           A G+E  R+                                                       V F+ ED V +AH G  YD +  FSV KW+HL  GD  ++GVF+  H+LL PGGRLILEPQPWKSY K  R+   A   AN DKI++RP DF AFL   VGF+S E L
Sbjct:   35 DPRLAVLSKDWFAGKRGLDVGCNSGDLTVAIAKKFEPAYLLGIDVDPQLIARARGQLKDIMQREHLQGALEAVATSATRSDDATDA-------ATDSSAEAAPSHDESKTSAMVTDVPLSFKLWKTPAHS------KTSAPKVLGKV---------------------------ALGSEFPRN-------------------------------------------------------VVFKREDIVKDAHAGKDYDFITCFSVTKWIHLFHGDDGIKGVFQHLHDLLAPGGRLILEPQPWKSYHK--RKFTSAVTAANYDKIQLRPKDFPAFLVETVGFKSCEFL 283          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A3B3RW34_9TELE (RNA methyltransferase n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RW34_9TELE)

HSP 1 Score: 144 bits (364), Expect = 1.690e-32
Identity = 128/392 (32.65%), Postives = 174/392 (44.39%), Query Frame = 3
Query:    3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDF-----DSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVS-------VVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADAR-ANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            G YN  YG      ++        DPR+ +L+  WF+GK  LD+GCN GHLTLAI + +RP R+VG+DID  LV  AR+ +   ++       RRA RED      DS G  +AL    +    +      RP   +S +     L      +     A  P  V RG++  V             C     +   E V  T      +E +P +N+   V         +S G   A     T      D     +F+ G  V     D +L A     YD +   SV KW+HLN GD  VQ +F +    LRPGG  ILEPQPW SY K  +   + DA   N   IR +P  F+ +LT EVGF S+E +G P      F +R I++F K
Sbjct:  415 GNYNKYYGYRNPGWSE--------DPRMCVLQPEWFQGKAVLDLGCNTGHLTLAIAKNWRPARIVGLDIDSALVHAARQNIRHYLSEVQAQQARRAVREDAGGSHGDSTGRRDALPESPSGGAANNVQKMDRP--DKSDKKTEAGLDVMWVPDGSTKLAEPPVSVERGDTGAV-------------C-----SEDMEGVEGT------MEPEPPRNSPMDVDHPFPVSLKISRGPIAAPPLPDTPPAVPGDFPANISFVRGNYV--LDNDILLHAQKP-EYDVILCLSVTKWVHLNWGDSGVQRLFHRVFRHLRPGGLFILEPQPWGSYGKRKK---LTDAIFKNYHSIRFKPDQFSTYLTSEVGFSSYELIGTPKSSSRGF-QRPIYLFRK 765          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A329RWP6_9STRA (RNA methyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWP6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.390e-31
Identity = 117/366 (31.97%), Postives = 157/366 (42.90%), Query Frame = 3
Query:    6 YYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
            YY  R G +     ++       DPRL  L RSWFEGK+ LD+GCN G LT+ I ++  P  ++GVD+D  L+  AR  L        K+  R+   E               AF+      + +     +S  G A + +  S EE         E V+ GE    + G   +G+  A                     NK+                       L  K +  +    A     +   AVG        F+ ED V +AH G GYD +  FSV KW+HL  GD+ ++ VF K +ELL PGGRLI+EPQPWKSY K  R+       AN  KI++RP DF   L   VGFRS E L
Sbjct:   39 YYTYRLGQKHQGELED-------DPRLAALDRSWFEGKRGLDIGCNSGELTITIAKRLEPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AFSE-----IPAVKAPAKSEEGAAASPADVSDEE--------KEAVKVGEDGIKKTG---DGDAFA---------------------NKMP----------------------LSFKLWKPSMHSQATVPRAIGKAAVGSKFPLNVVFKREDIVSDAHAGKGYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLIIEPQPWKSYHK--RKFTSEVTAANYPKIQLRPKDFPKHLVESVGFRSCEFL 314          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6A3JM65_9STRA (RNA methyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JM65_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.850e-31
Identity = 119/369 (32.25%), Postives = 158/369 (42.82%), Query Frame = 3
Query:    6 YYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDG---AKDADLHGKTFTTATLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
            YY  R G +     ++       DPRL  L RSWF+GK+ LD+GCN G LT+AI ++  P  ++GVD+D  L+  AR  L        K+  R+   E               AF                   G   A+ T S  + K S+A                       H+     A  +  AE     +K+D K           S   V DG   A +  L  + +  +    A     +   AVG        F+ ED V +AH G  YD +  FSV KW+HL  GD+ ++ VF K +ELL PGGRLI+EPQPWKSY K  R+       AN  KI++RP DF   L   VGFRS E L
Sbjct:   51 YYTYRLGQKHQGELED-------DPRLAALDRSWFDGKRGLDIGCNSGDLTIAIAKRLAPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AF-------------------GEIPAVKTTSKSDKKGSSAG----------------------HVDAESPADVSGEAEQEVVEKKEDEK----------KSNVKVGDGDAFASEMPLSFRLWKPSMQTQASVPKAIGKAAVGSEFPLNVIFKREDIVADAHAGKEYDFITCFSVTKWIHLFHGDEGIKKVFEKIYELLTPGGRLIIEPQPWKSYHK--RKFTSDVTAANYPKIQLRPKDFPKHLVEAVGFRSCEFL 337          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: G3QBV8_GASAC (RNA methyltransferase n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3QBV8_GASAC)

HSP 1 Score: 135 bits (340), Expect = 4.750e-31
Identity = 114/381 (29.92%), Postives = 169/381 (44.36%), Query Frame = 3
Query:    3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFT-TATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMAD-ARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            G YN  YG     A++        D R+ +L+  WFEGK  LD+GCN GHLTL I +  RP R++G+DID  LV  AR+ +   ++       R A +E       N    +G      H D   S          G  A                     +GES   E GK     H  + G        + V++   +   +++ P  ++ +    VS       +     T TAT    E  + ++     +  E+  L       YD +   SV KW+HLN GD  ++ +F++ +  LRPGG  ILEPQPW+SY    R+  + D    N   IR++P  FA++LT EVGF S+E LG P   +  F +R +++F K
Sbjct:   52 GNYNKYYGYRNPGASE--------DARVRVLRPEWFEGKDVLDLGCNSGHLTLYIAKMLRPARILGLDIDSGLVHAARKNIRHYLSELQTQEARHALQEKKG----NKQGESGTGTGERHSDAKSSE-------ENGKPA---------------------KGESGPAEAGKDNGSCHADEVGTQ-----RQVVKTGETEQEDLDSPPADHSASCSFPVSLRISRGPIAAPPLTETATTRPGEFPSNVSFVKANYVLENDNLLVTQRPEYDVIMCLSVTKWVHLNWGDCGLKRLFQRVYRHLRPGGVFILEPQPWESY---VRRKKLTDNIGRNFHSIRLKPDQFASYLTSEVGFTSYEYLGAPKCSIKGF-QRPMYLFHK 383          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A3R7GWV4_9STRA (RNA methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GWV4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.730e-31
Identity = 114/369 (30.89%), Postives = 154/369 (41.73%), Query Frame = 3
Query:   75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTA------TLDDAEEDTFLAGCAVG--------FRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            DPRL  L ++WFEGK+ LD+GCN G  T+ I R   P  ++G+D+D  LV  AR  L        K+  R+   E               AF                      TA+ TA  +E K S   +                    +  AD     + +GA+ +   +                    V + A +AD        +      T   A     +   AVG        F+ ED V +AH G  YD +  FSV KW+HL  GD+ ++ VF K +ELL PGGRLILEPQPWKSY K  R+       AN  KI++RP DF   L   VGFRS E L +       F +R ++V +K
Sbjct:   58 DPRLAALDKNWFEGKRGLDIGCNSGEFTITIARHLEPSYLLGIDVDPQLVSRARGHL--------KDIMRQEQIEK--------------AFEK-------------------ITAVKTAVNKEDKVSTTAIV------------------ADSPADVSGGDATSGADTIGDKQS-------------------VKEDAAEADAFANDMPLSFRLWKPTQPQAAVPRAIGKAAVGSKFPLNVIFKREDVVTDAHAGMDYDFITCFSVTKWIHLFHGDEGIKKVFVKIYELLAPGGRLILEPQPWKSYHK--RKFTSDITAANYPKIQLRPKDFPTHLVEMVGFRSCEFLEVCQTSAKGF-RRPVYVALK 345          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6P3W781_CLUHA (RNA methyltransferase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W781_CLUHA)

HSP 1 Score: 139 bits (351), Expect = 6.990e-31
Identity = 118/391 (30.18%), Postives = 173/391 (44.25%), Query Frame = 3
Query:    3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGH------PDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGC-----GYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADA-RANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            G Y   YG      +D        DPR+ +L+  WF+GK  LD+GCN GHLT++I +Q+RP R+VG+DIDG L+  AR+ +   ++       RR   ED   G   +   +GV   T         +  + RP+  R L+              ++    + E+ R  E N     ++++G      G      G     S R     I A P   + +                           +  +F A   V F   ++VLEA          YD +   SV KW+HLN GD  ++ +FR+ +  LRPGG LILEPQPW SY    R+  + D    N   I +RP  F+ +LT EVGF S+E +G P E +    +R I++F K
Sbjct:  416 GNYTKYYGYRNPGTSD--------DPRMEMLRPEWFQGKTVLDLGCNTGHLTMSIAKQWRPSRIVGLDIDGGLIHAARQNIRYYLSEIQAREARRHGEEDGQRGRVTDDRKDGVCEETTEHRNDPMEEDREDRPVTDRGLKSN----------RAEQGGNGLDERRRALERNEERTSEKKDG----GGGRGYPKGGGTFPVSLRISRGPIAAPPLPRSPSQ--------------------------QRGSFPAN--VSFVTGNYVLEADQLLLPEKEEYDVILCLSVTKWVHLNWGDAGLKRLFRRAYRHLRPGGLLILEPQPWSSY---GRKKRLTDTIYKNYFNIHLRPDQFSTYLTCEVGFSSYEFIGTP-EHLSRGFQRPIYLFRK 752          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: A0A6G1QV82_9TELE (RNA methyltransferase n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1QV82_9TELE)

HSP 1 Score: 137 bits (345), Expect = 3.650e-30
Identity = 123/401 (30.67%), Postives = 181/401 (45.14%), Query Frame = 3
Query:    3 GYYNTRYGCEPASATDNFLRAGDRDPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRS---------TRKKDNKIEAKPQKNNEA-----SVSV-------VSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMAD-ARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPGEGVGSFAKRSIHVFIK 1139
            G YN  YG     A++        DPR+ +L+  WFEGK  LD+GCN GHLTL I +  RP R++G+DID  LV  AR+ +   ++       RR  +E                          S     R+  G  + +                EK    + NR ENGK   GE          +  AEAV           T+++D+K E   Q++ ++     SVS        +S G   A    +TFTT   +     +F+    V   ++  +L       YD +   SV KW+HLN GD  ++ +F++ +  LRPGG+ ILEPQPW+SY    R+  + D    N   I ++P  F+++LT EVGF S+E LG P   V  F +R +++F K
Sbjct:  395 GNYNKYYGYRNPGASE--------DPRIRLLRPEWFEGKDVLDLGCNSGHLTLYIAKMLRPARILGLDIDNSLVHAARKNIRHYLSELQTQEARRVMQEK------------------------KSPKQEERNGDGDESHMGI--------------EKKHNKDENRNENGKPVTGE----------SGPAEAVNDNDCHTDETGTQRQDSKAEEMEQEDCKSPPADHSVSCSFPVSLRISRGPIAAPPLTETFTTRPGEFPSNVSFIKANYV-LENDSLLLTQRPE--YDLILCLSVTKWVHLNWGDSGLKRLFKRVYRHLRPGGKFILEPQPWESY---VRRKKLTDNINRNYHSICLKPDQFSSYLTTEVGFTSFEYLGSPKCSVRGF-QRPVYLFHK 732          
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Match: H3GI20_PHYRM (RNA methyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI20_PHYRM)

HSP 1 Score: 131 bits (330), Expect = 5.030e-30
Identity = 114/335 (34.03%), Postives = 149/335 (44.48%), Query Frame = 3
Query:   75 DPRLNILKRSWFEGKKCLDVGCNEGHLTLAIVRQFRPRRMVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNGVAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRGESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNEASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEAHCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQPWKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEEL 1079
            DPRL  L RSWFEGK  LD+GCN G  T+ I ++  P  ++GVD+D  L+  AR  L        K+  R+   E               AF           P    + +   +  STA+  E  +S A V  +   GES +    K  E E  +  G+A +     + R           KP   N+A+V      A      G  F    +               F+ ED V +AH G  YD +  FSV KW+HL  GD+ ++ VF K +ELL PGGRLI EPQPWKSY K  R+       AN  KI +RP DF   L   VGF+S E L
Sbjct:   57 DPRLASLDRSWFEGKHGLDIGCNSGEFTITIAKRLAPSYLLGVDVDPQLISRARGHL--------KDILRQEQIEK--------------AFG--------EIPAAKTTAKNEDS--STAAGGEAADSPADVSGETSAGESKQE---KTEEEEKKSGDGDAFANEMPLSFRLW---------KPSMQNQAAVPRAIGKA----AVGSVFPLNVI---------------FKREDIVSDAHAGKNYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLIFEPQPWKSYHK--RKFTSEVTAANYPKIELRPKDFPKHLIDTVGFQSCEFL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5998.13529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLW6_ECTSI3.780e-9544.76RNA methyltransferase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A2D4C8W2_PYTIN2.240e-3532.95RNA methyltransferase n=1 Tax=Pythium insidiosum T... [more]
A0A3B3RW34_9TELE1.690e-3232.65RNA methyltransferase n=3 Tax=Paramormyrops kingsl... [more]
A0A329RWP6_9STRA2.390e-3131.97RNA methyltransferase n=2 Tax=Phytophthora TaxID=4... [more]
A0A6A3JM65_9STRA3.850e-3132.25RNA methyltransferase n=4 Tax=Phytophthora TaxID=4... [more]
G3QBV8_GASAC4.750e-3129.92RNA methyltransferase n=1 Tax=Gasterosteus aculeat... [more]
A0A3R7GWV4_9STRA5.730e-3130.89RNA methyltransferase n=3 Tax=Phytophthora kernovi... [more]
A0A6P3W781_CLUHA6.990e-3130.18RNA methyltransferase n=1 Tax=Clupea harengus TaxI... [more]
A0A6G1QV82_9TELE3.650e-3030.67RNA methyltransferase n=1 Tax=Channa argus TaxID=2... [more]
H3GI20_PHYRM5.030e-3034.03RNA methyltransferase n=1 Tax=Phytophthora ramorum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5998contigH-elongata_contig5998:1112..4411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.1
Seed ortholog evalue2.3e-56
Seed eggNOG ortholog2880.D7FLW6
EggNOG free text desc.negative regulation of pre-miRNA processing
EggNOG OGsKOG2899@1,KOG2899@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1940
Cds size951
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5998.13529.1prot_H-elongata_contig5998.13529.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5998 1303..3613 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930970.987684-UTR-H-elongata_contig5998:1111..13021622930970.987684-UTR-H-elongata_contig5998:1111..1302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5998 1112..1302 +
1691679645.4538026-UTR-H-elongata_contig5998:1111..13021691679645.4538026-UTR-H-elongata_contig5998:1111..1302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5998 1112..1302 +
1622930971.0846722-UTR-H-elongata_contig5998:3613..44111622930971.0846722-UTR-H-elongata_contig5998:3613..4411Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5998 3614..4411 +
1691679645.5105648-UTR-H-elongata_contig5998:3613..44111691679645.5105648-UTR-H-elongata_contig5998:3613..4411Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5998 3614..4411 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930971.0053043-CDS-H-elongata_contig5998:1302..13501622930971.0053043-CDS-H-elongata_contig5998:1302..1350Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 1303..1350 +
1691679645.4656975-CDS-H-elongata_contig5998:1302..13501691679645.4656975-CDS-H-elongata_contig5998:1302..1350Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 1303..1350 +
1622930971.0254278-CDS-H-elongata_contig5998:1636..23351622930971.0254278-CDS-H-elongata_contig5998:1636..2335Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 1637..2335 +
1691679645.4758036-CDS-H-elongata_contig5998:1636..23351691679645.4758036-CDS-H-elongata_contig5998:1636..2335Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 1637..2335 +
1622930971.0451708-CDS-H-elongata_contig5998:2927..30411622930971.0451708-CDS-H-elongata_contig5998:2927..3041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 2928..3041 +
1691679645.4855485-CDS-H-elongata_contig5998:2927..30411691679645.4855485-CDS-H-elongata_contig5998:2927..3041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 2928..3041 +
1622930971.064601-CDS-H-elongata_contig5998:3523..36131622930971.064601-CDS-H-elongata_contig5998:3523..3613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 3524..3613 +
1691679645.49766-CDS-H-elongata_contig5998:3523..36131691679645.49766-CDS-H-elongata_contig5998:3523..3613Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5998 3524..3613 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5998.13529.1

>prot_H-elongata_contig5998.13529.1 ID=prot_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp
MVGVDIDGYLVQLAREALAGEINSATKNAKRRADREDFDSGGYNNALNNG
VAFATGHPDLLDSRPLVPRSLRGGATALSTASAEEIKESAAYVPEKVRRG
ESNRVENGKRREGEHIADCGNASSAAGAEAVRSTRKKDNKIEAKPQKNNE
ASVSVVSDGAKDADLHGKTFTTATLDDAEEDTFLAGCAVGFRHEDFVLEA
HCGCGYDAVCLFSVVKWMHLNGGDKAVQGVFRKTHELLRPGGRLILEPQP
WKSYRKSARQHGMADARANADKIRMRPSDFAAFLTGEVGFRSWEELGMPG
EGVGSFAKRSIHVFIK*
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mRNA from alignment at H-elongata_contig5998:1112..4411+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5998.13529.1 ID=mRNA_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3300bp|location=Sequence derived from alignment at H-elongata_contig5998:1112..4411+ (Himanthalia elongata Himel1 dioecious)
CAGGCTACTACAACACCCGGTATGGGTGCGAGCCCGCCTCCGCTACAGAT AATTTCCTCCGTGCCGGGGACCGGGACCCGCGTCTCAATATTCTCAAACG ATCCTGGTTCGAGGGAAAGAAGTGCCTAGACGTCGGCTGCAACGAAGGCC ATCTTACGCTCGCCATCGTAAGGCAATTTCGCCCTCGGCGAATGGTCGGT GTGGACATCGACGGTTATCTCGTCCAGCTGGCTCGCGAAGTGAGGCCCTA TGAGCAGCTGTACATGTCATCGTGATGCTCCGCTCCAGCGTGCGCGCCTA TTGTCTGGCTTATAAATTTGTAGTTTTAGGACGATGAATTCGCCGCGTTG AAAACCTTCCGCAGCTAATATTAGTATATATAAAATCACCTCTCGCCGGG GTGGTTGGGTGACGTGGTGGCTTGTTCGAGGACACAGTAGCTCCGTCCTT TTTCTTTTCATTGCATTATCTTCCCTCAATTAAGTGCTCCGCTGCGCGTA TGCTCGGTATTTTTTTCTGTAACAGGCGCTTGCCGGAGAGATAAACTCCG CCACGAAAAACGCGAAGCGCAGGGCTGATCGAGAAGACTTCGACTCCGGC GGATATAACAACGCTTTAAATAACGGTGTCGCGTTCGCAACTGGACACCC GGACCTGCTCGACTCTAGGCCGTTGGTGCCCCGTTCTCTTCGTGGCGGTG CGACAGCTCTATCCACCGCTTCCGCTGAGGAAATAAAAGAGAGCGCTGCG TACGTCCCCGAGAAAGTCCGACGGGGGGAAAGTAATCGTGTCGAGAACGG CAAGCGTCGTGAAGGCGAGCACATTGCTGATTGTGGCAATGCTTCGTCCG CAGCAGGAGCGGAGGCGGTGAGGTCTACTCGAAAGAAAGATAATAAAATA GAGGCCAAGCCTCAGAAAAACAATGAAGCGTCTGTCTCTGTTGTTAGCGA CGGCGCGAAGGACGCCGATCTCCATGGAAAAACGTTTACCACCGCTACCT TAGATGACGCCGAGGAAGACACGTTCCTGGCGGGGTGTGCCGTCGGCTTT CGGCACGAAGACTTCGTGTTGGAGGCGCACTGCGGGTGCGGATACGACGC TGTCTGTCTCTTCAGCGTGGTGAAATGGATGCACCTGAACGGTGGGGACA AAGCGGTGCAAGGAGTTTTCCGGAAGACCCACGAGTTGCTCAGGCCAGGC GGCCGACTTATCCTGGAGCCACAGGTAGGCTTAAAGTAAGAGTTTGGTGG CGTGGGGGGTTGGCGGGATCCGGAGGAGAGTTGCTAAGCATTTCTTACTA ATACGATGGTCTAGCGTGGATGTGGTGGGTGGGTGACTAGCCAAGGCGAA AACTGTGCGCGACAATGTAAATGTATTCTGTTAGCTATTTTAGATGTCTT CATTTGGGATAGGTTCAAACTGGACTGATTCAGACCCCAAATGTATTGCT GCTGCTTGCGCACGTGGCCTGACGATTAGTGGTCGTGAAATATTGAGGAT GCCCGAGTCTACCCGCGTCGCATTCAATGTACTCATCGGAGGTAACTGTT TATACCACACACACAAGGATATGGTTTTACCGTTTGATCTTGCCAGTAAA CATTATCAGATCGGTTAAATATGTCACTGTTGCCTGTTGTGAAAACTGGG AGAGTGTTTTACCATTCTCGGGGTGTCCAATATACCGTTACCCGTGGTGC TCTATTGAAAGTAAGGTTAGCCTTGTCATGGGTCTGTTGCTACTCATCTA TCCGAAACGGAAGGTTTTGTGTCACCAGCTTTACTTGTCTCACCCTTTTG TCACGCGCCACGCTAGCCGTGGAAATCCTACAGAAAAAGTGCGCGGCAGC ACGGTATGGCAGATGCTAGAGCGAACGCCGACAAGATACGGATGCGACCA TCCGATTTCGCCGCATTTCTCACGGGCGAGGTAATCCTTTTGTCAGTGCT GCTGATATCCTAGCCAGAATCTGGCCGTTTGCTCGGCTACGGTCTACGTG TCCTCTGGTATAAATAAAATGTGTACCGGATGCTTGTGCTGGCCTCGAAT GCATTTATATTTCGGGTGTAACGAGGGTGGGTGGCACGTGAGTCGTGGGA GCATAATTCAGCTGACAACAAGCAGGAGACAACCAAATCCGGTTGATCTT ACTCTGCTATATGTGATGGCCACAGAACAGACTGGTCTCTCTCAAGACCT CGAGATTATGAGCAGTGATGTGGAAAGAGGCAATGGATACGTTCTGGTTC TTTTGAACCCGTGAACGCAAGATCTTCCATTCAAATAAAGGATATCAGGC TTGCTTCACATATTTTGTATATCGTGATGCAAACGCAGGGTATACGGGAG CGTTTGTCCCCAATAGTTTTCATTCATATCTTGCCTCTGATTTGCGCGTC TTGCATCGGCAGGTGGGTTTCCGCTCGTGGGAGGAGCTAGGTATGCCCGG AGAAGGGGTGGGCTCCTTTGCCAAAAGGAGCATACATGTCTTCATAAAGT AATATACAGTCGTGCAGACCTCACTAACATCGCGGGTATACGTCACCTCT TCTCAACGTGGACGGTGCGGTGACATCTGAACAAAGGCCTTTCTTGGAAA TGGAGGAGGATCTCGTCCTCAAGATCGTGAGAACTTGGGATAATATCGTT TTCTGCCGCCGTGAGCATGGGCGTAGCTGACCATAGCGCTTGGTAGTATC AGGAATACTGTTCAGAGCCTCTAGCCCGAATGATATTTTGCTGGTGGGGC CTGTGTGTGACCCCTCTTTCCCTCTACGTCTTCGTAATGTACACCAGGAA GACCTCCCACGCAAAGTATACACGCGAAAAATTGGCTAAATCTGTTGTAC TCCTGCTTTTGGTGCTTGTTCTAGGATTATAATGCAAGCGAATCCCTCTT TGAAGACATTTTTAGCGCAGAACGCACCGCGCGATCATACTGGAGCGATG TTTATTCAAGTCGTGTATTGACGGGCTGTGTCCCATCCGTCACGAAATTG ATGCTGGTCCGCCTCTGGCGTATTTGTTGCGTAAAAATTAACGTAATGTT CAACATTTTATGCTAGCCTAATATGTGGGAATGAAGTGTTCTTAAGCCCA TACGCTGCGTGAAGAAAGTAGACCGGATTTTACAGCCCGGCGATGAGCAA AAAGAGATTCCGTGTTGGCGAATCGCGAAGCTTTATTTTTCGGGTAAACA CGCTTCCCTCCCCGGCGCTCTAATTATACGTGACTCTGTTATGGGCGAAC AGTGAACGTACACGCGGATGCTTGGAGCGCAGAAGCACGTTTGACCACCA
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Coding sequence (CDS) from alignment at H-elongata_contig5998:1112..4411+

>mRNA_H-elongata_contig5998.13529.1 ID=mRNA_H-elongata_contig5998.13529.1|Name=mRNA_H-elongata_contig5998.13529.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1902bp|location=Sequence derived from alignment at H-elongata_contig5998:1112..4411+ (Himanthalia elongata Himel1 dioecious)
ATGGTCGGTGTGGACATCGACGGTTATCTCGTCCAGCTGGCTCGCGAAAT
GGTCGGTGTGGACATCGACGGTTATCTCGTCCAGCTGGCTCGCGAAGCGC
TTGCCGGAGAGATAAACTCCGCCACGAAAAACGCGAAGCGCAGGGCTGAT
CGAGAAGACTTCGACTCCGGCGGATATAACAACGCTTTAAATAACGGTGT
CGCGTTCGCAACTGGACACCCGGACCTGCTCGACTCTAGGCCGTTGGTGC
CCCGTTCTCTTCGTGGCGGTGCGACAGCTCTATCCACCGCTTCCGCTGAG
GAAATAAAAGAGAGCGCTGCGTACGTCCCCGAGAAAGTCCGACGGGGGGA
AAGTAATCGTGTCGAGAACGGCAAGCGTCGTGAAGGCGAGCACATTGCTG
ATTGTGGCAATGCTTCGTCCGCAGCAGGAGCGGAGGCGGTGAGGTCTACT
CGAAAGAAAGATAATAAAATAGAGGCCAAGCCTCAGAAAAACAATGAAGC
GTCTGTCTCTGTTGTTAGCGACGGCGCGAAGGACGCCGATCTCCATGGAA
AAACGTTTACCACCGCTACCTTAGATGACGCCGAGGAAGACACGTTCCTG
GCGGGGTGTGCCGTCGGCTTTCGGCACGAAGACTTCGTGTTGGAGGCGCA
CTGCGGGTGCGGATACGACGCTGTCTGTCTCTTCAGCGTGGTGAAATGGA
TGCACCTGAACGGTGGGGACAAAGCGGTGCAAGGAGTTTTCCGGAAGACC
CACGAGTTGCTCAGGCCAGGCGGCCGACTTATCCTGGAGCCACAGGCGCT
TGCCGGAGAGATAAACTCCGCCACGAAAAACGCGAAGCGCAGGGCTGATC
GAGAAGACTTCGACTCCGGCGGATATAACAACGCTTTAAATAACGGTGTC
GCGTTCGCAACTGGACACCCGGACCTGCTCGACTCTAGGCCGTTGGTGCC
CCGTTCTCTTCGTGGCGGTGCGACAGCTCTATCCACCGCTTCCGCTGAGG
AAATAAAAGAGAGCGCTGCGTACGTCCCCGAGAAAGTCCGACGGGGGGAA
AGTAATCGTGTCGAGAACGGCAAGCGTCGTGAAGGCGAGCACATTGCTGA
TTGTGGCAATGCTTCGTCCGCAGCAGGAGCGGAGGCGGTGAGGTCTACTC
GAAAGAAAGATAATAAAATAGAGGCCAAGCCTCAGAAAAACAATGAAGCG
TCTGTCTCTGTTGTTAGCGACGGCGCGAAGGACGCCGATCTCCATGGAAA
AACGTTTACCACCGCTACCTTAGATGACGCCGAGGAAGACACGTTCCTGG
CGGGGTGTGCCGTCGGCTTTCGGCACGAAGACTTCGTGTTGGAGGCGCAC
TGCGGGTGCGGATACGACGCTGTCTGTCTCTTCAGCGTGGTGAAATGGAT
GCACCTGAACGGTGGGGACAAAGCGGTGCAAGGAGTTTTCCGGAAGACCC
ACGAGTTGCTCAGGCCAGGCGGCCGACTTATCCTGGAGCCACAGCCGTGG
AAATCCTACAGAAAAAGTGCGCGGCAGCACGGTATGGCAGATGCTAGAGC
GAACGCCGACAAGATACGGATGCGACCATCCGATTTCGCCGCATTTCTCA
CGGGCGAGCCGTGGAAATCCTACAGAAAAAGTGCGCGGCAGCACGGTATG
GCAGATGCTAGAGCGAACGCCGACAAGATACGGATGCGACCATCCGATTT
CGCCGCATTTCTCACGGGCGAGGTGGGTTTCCGCTCGTGGGAGGAGCTAG
GTATGCCCGGAGAAGGGGTGGGCTCCTTTGCCAAAAGGAGCATACATGTC
TTCATAAAGTAAGTGGGTTTCCGCTCGTGGGAGGAGCTAGGTATGCCCGG
AGAAGGGGTGGGCTCCTTTGCCAAAAGGAGCATACATGTCTTCATAAAGT
AA
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