mRNA_H-elongata_contig5991.13525.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5KMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH6_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.030e-61 Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMTKLGTKGN----PESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
CVEEGAPSV+RMN GYGGVRKG +A Q+A TILEDTPKLK G Q+LTFQ+GE PFY+ A+DHVGKVKG+KQILFERGL PG T LG K P+ SM VL AQ DFANV+ SL L++R GG ALMLPKFHCE+NPIELVWGRS
Sbjct: 119 CVEEGAPSVTRMNAGYGGVRKGQEIAPQNATTILEDTPKLKVGAVQHLTFQQGEYPFYEPGATDHVGKVKGMKQILFERGLWIPGTTVLGGKKGQEPKPKMSMPVVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRS 269
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 213 bits (541), Expect = 3.170e-59 Identity = 107/151 (70.86%), Postives = 121/151 (80.13%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMT----KLGTKGNPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
CVEEGAPSV+RMN GYGGVRKG +A Q+A TILEDTPKLK G Q+LTFQ+GE PFY+ A+DHVGKVKG+KQILFERGL PGMT K G + N + SM AVL AQ DFANV+ SL L++R GG ALMLPKFHCE+NPIELVWGRS
Sbjct: 440 CVEEGAPSVTRMNAGYGGVRKGQEIAPQNATTILEDTPKLKVGAVQHLTFQQGEYPFYEPGATDHVGKVKGMKQILFERGLWIPGMTMSGGKKGQEPNKKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRS 590
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 200 bits (509), Expect = 2.180e-55 Identity = 103/144 (71.53%), Postives = 114/144 (79.17%), Query Frame = 3
Query: 393 VSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMTKLGT-KG----NPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
+RMN GYGGVRKGA LAAQ+A T+L DTPKLKKG Q+LTFQEGE PFYD DA+DH+GKVKGLKQILFERGL M+ G KG +P M AVL AQ DFANVEPSL+ LV+R GG A+MLPKFHCEINPIELVWGRS
Sbjct: 341 ATRMNAGYGGVRKGAQLAAQNATTLLADTPKLKKGTVQHLTFQEGECPFYDPDATDHIGKVKGLKQILFERGLWNADMSMKGIRKGQQEYDPALCMPAVLGAQEDFANVEPSLMVLVKRHGGVAIMLPKFHCEINPIELVWGRS 484
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.300e-48 Identity = 95/152 (62.50%), Postives = 106/152 (69.74%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMTKLGTKG-----NPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
CVE+GAPS +RMN GYGGVRKG LAAQDA T+L TPKL+KG Q LTFQEGE FYD A DH+GK K LKQ+LFERGL M+ G K +P V Q DFA+VEPSLV LV+R G A+MLPK H EINPIELVWGRS
Sbjct: 372 CVEDGAPSATRMNAGYGGVRKGKQLAAQDATTLLAHTPKLEKGTVQYLTFQEGESTFYDPGAEDHIGKHKRLKQVLFERGLCNADMSMKGIKKGQQKYDPALCTSVVFGTQEDFASVEPSLVVLVKRHEGVAIMLPKLHREINPIELVWGRS 523
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 179 bits (455), Expect = 7.240e-47 Identity = 94/152 (61.84%), Postives = 109/152 (71.71%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMTKLGTKG-----NPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
CVE+GAPS +RMN GYGGVRKG LAAQDA T+L DTPKLK+G Q LTFQ GE F DV A D++GK+KGLKQ+LFERGL M+ G K +P M L Q D A+VEPSLV V+R G A++LPK+HCEINPIELVWGRS
Sbjct: 495 CVEDGAPSATRMNAGYGGVRKGKQLAAQDATTLLADTPKLKQGTVQYLTFQ-GESLFCDVGAEDYIGKLKGLKQVLFERGLWNADMSMKGIKKGQQKYDPALCMPVGLGTQEDLASVEPSLVVFVKRREGVAIILPKYHCEINPIELVWGRS 645
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5KNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.740e-46 Identity = 106/207 (51.21%), Postives = 121/207 (58.45%), Query Frame = 3
Query: 234 ERGNSSQGM*RG---VEQWSGVLRTRAKRMP-------WSNRSSYRA*CRATSGRCVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMTKLGTKG-----NPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
E G S G G VEQ + VL A + P WS+R Y C+E+GAPS +RMN GYGG DTPKLKKG Q LTFQEGE PFYD A D++GK+KGLKQ+LFERGL M+ G K +P M VL Q DFA+VEPSLV LV+R GG A+MLPKFHCEINPIELVWGRS
Sbjct: 333 EYGKSRDGYWTGANLVEQMADVLDLLAVKYPKPICFFDWSSRHDY----------CIEDGAPSATRMNAGYGG-----------------DTPKLKKGTVQYLTFQEGESPFYDPGAEDYIGKLKGLKQVLFERGLWNADMSTKGIKKGQQKYDPALCMPVVLGTQEDFASVEPSLVVLVKRHGGVAIMLPKFHCEINPIELVWGRS 512
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5KK29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK29_9PHAE) HSP 1 Score: 169 bits (427), Expect = 4.190e-45 Identity = 88/139 (63.31%), Postives = 101/139 (72.66%), Query Frame = 3
Query: 402 MNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDASDHVGKVKGLKQILFERGLLKPGMT----KLGTKGNPESSMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGR 806
MN GYGG RKG +A QDA TILEDTPKLKKG Q LTFQ GE PF++ A+D VGK+KGLKQ+LFERGL PGM+ K G K ++SM AVL Q DFA V+ SL L++R GG ALMLPKFH E+N IELVW R
Sbjct: 203 MNAGYGGARKGQEMAPQDATTILEDTPKLKKGAAQFLTFQAGEYPFHEPGATDQVGKIKGLKQVLFERGLWIPGMSMTGAKKGQKAILKTSMPAVLRGQKDFAKVDSSLEVLLKRHGGVALMLPKFHFELNQIELVWRR 341
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5JH47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH47_9PHAE) HSP 1 Score: 160 bits (406), Expect = 2.620e-43 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGE-VPFYD--VDASDHVGKVKGLKQILFERGLLKPGMTKLGTKGNPES---SMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
C+E GAPSV RMN+G GGVR G LA D VTILEDTP L G Q+L F+ G+ PF+ + + +VGK+KG++QIL+ERGLL GM+K G G + SM VL Q DF V+ SLV L++R GG LMLPK+HCE NPIELVWGR+
Sbjct: 33 CMEVGAPSVKRMNLGVGGVRNGEELAPMDPVTILEDTPNLPAGTVQHLVFRRGDDPPFHSPHLKPAQYVGKLKGMRQILWERGLLVKGMSKTGGSGEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCEYNPIELVWGRA 185
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5J9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.980e-43 Identity = 85/153 (55.56%), Postives = 107/153 (69.93%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYD---VDASDHVGKVKGLKQILFERGLLKPGMTKLGTKGNPES---SMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
C+E GAPSV RMN+G GGVR G LA DAVTILEDTPKL G Q+LTF+ G+ P + + +++VGK+KG++Q+L+ERGLL GMTK G G + SM VL Q DF V+ SLV L++R GG LMLPK+HCE + IELVWGR+
Sbjct: 63 CLEVGAPSVKRMNLGVGGVRNGEELAPMDAVTILEDTPKLPAGTVQHLTFRRGDPPPFHSPHLRPAEYVGKLKGMRQVLWERGLLVKGMTKTGGSGEEQDLRKSMEHVLGEQKDFKEVDSSLVLLMQRHGGGYLMLPKYHCECSLIELVWGRA 215
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Match: A0A6H5JCJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ8_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.090e-42 Identity = 87/153 (56.86%), Postives = 108/153 (70.59%), Query Frame = 3
Query: 369 CVEEGAPSVSRMNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYD---VDASDHVGKVKGLKQILFERGLLKPGMTKLGTKGNPES---SMVAVLSAQLDFANVEPSLVKLVRRCGGFALMLPKFHCEINPIELVWGRS 809
C+E GAPSV RMN+G GGVR G LA DAVTILEDTPKL G Q+LTF+ G+ P + + +++VGK+KG++Q+L+ERGLL GMTK G G + SM VL Q DF V+ SLV L++R GG LMLPK+HCE NPIELVWGR+
Sbjct: 465 CLEVGAPSVKRMNLGVGGVRNGEELAPMDAVTILEDTPKLPAGTVQHLTFRRGDPPPFHSPHLRPAEYVGKLKGMRQVLWERGLLVKGMTKTGGSGEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGGCLMLPKYHCECNPIELVWGRA 617 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5991.13525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5991.13525.1 >prot_H-elongata_contig5991.13525.1 ID=prot_H-elongata_contig5991.13525.1|Name=mRNA_H-elongata_contig5991.13525.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp MNVGYGGVRKGANLAAQDAVTILEDTPKLKKGQKQNLTFQEGEVPFYDVDback to top mRNA from alignment at H-elongata_contig5991:9760..11222+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5991.13525.1 ID=mRNA_H-elongata_contig5991.13525.1|Name=mRNA_H-elongata_contig5991.13525.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1463bp|location=Sequence derived from alignment at H-elongata_contig5991:9760..11222+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5991:9760..11222+ >mRNA_H-elongata_contig5991.13525.1 ID=mRNA_H-elongata_contig5991.13525.1|Name=mRNA_H-elongata_contig5991.13525.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig5991:9760..11222+ (Himanthalia elongata Himel1 dioecious)back to top |