prot_H-elongata_contig59902.13523.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59902.13523.1
Unique Nameprot_H-elongata_contig59902.13523.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: A0A6H5J784_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J784_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.730e-36
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 0
Query:   50 DVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFVSVI 124
            DV S GE SCQICF+ +HST MLPCGHGG+CWDCGLQ++ALTEECPMCRTKIELLV+LD   RR EGE+++VS +
Sbjct:  113 DVRSVGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSAL 187          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: D8LGR8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR8_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.560e-35
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0
Query:   50 DVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFVSVI 124
            DV SAGE SCQICF+ +HST MLPCGHGG+CWDCGLQ++ALTEECPMCRTKIELLV+LD   RR EGE+++VS +
Sbjct:  246 DVRSAGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSAL 320          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: D8LGR9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR9_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 4.540e-30
Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 0
Query:   50 DVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFVS 122
            D+ SAGE +CQICF+ ++ST MLPCGHGG+CW+CGL ++ LTEECPMCRTKIELLV LD+ ++R EG  +FVS
Sbjct:  106 DLRSAGERACQICFDQDYSTVMLPCGHGGLCWECGLHIYTLTEECPMCRTKIELLVPLDNENKRFEGGCEFVS 178          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: A0A6H5J9Q3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q3_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.700e-27
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0
Query:   50 DVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFV 121
            D+ SA E +CQICF   +ST MLPCGHGG+CW+CGL ++AL EECPMCRTKIELLV LD+ ++R EG  +FV
Sbjct:  153 DLRSAVERACQICFGQNYSTVMLPCGHGGLCWECGLHIYALKEECPMCRTKIELLVPLDNENKRFEGGREFV 224          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: Q23UD8_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23UD8_TETTS)

HSP 1 Score: 69.7 bits (169), Expect = 2.490e-11
Identity = 37/126 (29.37%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    1 EFLRKILEWAKREAKTASVDXXXXXXPSETETDQCPPSSPNSRLQKGTSDVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFVSVISS 126
            EF +K+ + + +E    +V         ++++ Q      + +  K   D S+A    C ICFE+E  T  LPCGHGG+C++CG+ V   T EC +CR +I+ +V++D  S   + +++ +++ ++
Sbjct:  775 EFEKKMQQQSNKELAKLNVKPKEMVKKQKSDSSQI-----SQKSYKENGDESNAN---CVICFENEPDTVYLPCGHGGICYECGMDVMKKTGECYLCRHEIKQVVQIDFKST--DAQKKIIAITAA 890          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: I7MAP5_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MAP5_TETTS)

HSP 1 Score: 65.9 bits (159), Expect = 5.220e-10
Identity = 27/81 (33.33%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   45 QKGTSDVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIEGEEQFVSVIS 125
            QK   +  +    +C +CFE++  T  + CGHGG+C++C L ++  T+EC +CR K+E L +L+ +S   + ++  + V+S
Sbjct:  522 QKQEEESKNTSIQNCLVCFENQPDTVFMNCGHGGICYECALLIWKNTQECYLCRQKVEQLYQLEYNS---DNKDNVMKVLS 599          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: I7LXF1_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LXF1_TETTS)

HSP 1 Score: 64.7 bits (156), Expect = 5.790e-10
Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   56 EDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLD 108
            E +C ICF++   +  + CGHGG+C+DC L ++ +T EC +CR KI+ ++++D
Sbjct:  162 EQNCLICFQNSQDSVFMNCGHGGICYDCSLDIWKITGECYLCREKIKQILQID 214          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: A0CW58_PARTE (RING-type domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CW58_PARTE)

HSP 1 Score: 64.3 bits (155), Expect = 1.770e-9
Identity = 26/65 (40.00%), Postives = 45/65 (69.23%), Query Frame = 0
Query:   49 SDVSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRR 113
            S +S +  +SC ICFE+E +   + CGHGGVC++C + ++   EEC +CR+KIE ++++  S ++
Sbjct:  430 SSISLSSINSCCICFENEPNALFMQCGHGGVCYNCAIDLWKNKEECYLCRSKIERVLQIKMSEQQ 494          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: A0A7M7N5B5_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7N5B5_STRPU)

HSP 1 Score: 63.2 bits (152), Expect = 4.610e-9
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   53 SAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRLDSSSRRIE 115
            S  E +C +CF+ E S    PCGHGG C DC +Q+    E+CP+CRT I   +R DSS+  +E
Sbjct:  561 SISETACSLCFDKEASVTFRPCGHGGFCPDCAIQL----EQCPLCRTIIMQRLRSDSSTIGVE 619          
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Match: A0A6J1VV24_9SAUR (E3 ubiquitin-protein ligase NEURL3 n=2 Tax=Acanthophiinae TaxID=42167 RepID=A0A6J1VV24_9SAUR)

HSP 1 Score: 61.2 bits (147), Expect = 1.240e-8
Identity = 22/51 (43.14%), Postives = 33/51 (64.71%), Query Frame = 0
Query:   57 DSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTKIELLVRL 107
            + C +CF  E ST M PC H G C  C L++F ++  CP+CR K+E ++R+
Sbjct:  187 EDCMVCFASEASTMMFPCHHTGFCSSCSLKIFKISGRCPLCREKVEKILRI 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59902.13523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J784_9PHAE3.730e-3673.33RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGR8_ECTSI2.560e-3574.67RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGR9_ECTSI4.540e-3067.12RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J9Q3_9PHAE1.700e-2765.28RING-type domain-containing protein n=1 Tax=Ectoca... [more]
Q23UD8_TETTS2.490e-1129.37Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
I7MAP5_TETTS5.220e-1033.33Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
I7LXF1_TETTS5.790e-1041.51Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
A0CW58_PARTE1.770e-940.00RING-type domain-containing protein n=1 Tax=Parame... [more]
A0A7M7N5B5_STRPU4.610e-946.03Uncharacterized protein n=2 Tax=Echinacea TaxID=76... [more]
A0A6J1VV24_9SAUR1.240e-843.14E3 ubiquitin-protein ligase NEURL3 n=2 Tax=Acantho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 59..97
e-value: 7.4E-5
score: 32.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 59..98
score: 10.734
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 57..102
e-value: 2.2E-13
score: 49.9
NoneNo IPR availablePANTHERPTHR12429:SF9E3 UBIQUITIN-PROTEIN LIGASE NEURL3coord: 31..108
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 47..104
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 41..115
e-value: 1.1E-14
score: 55.5
IPR037962NeuralizedPANTHERPTHR12429NEURALIZEDcoord: 31..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59902contigH-elongata_contig59902:1450..2328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59902.13523.1mRNA_H-elongata_contig59902.13523.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59902 120..2328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59902.13523.1 ID=prot_H-elongata_contig59902.13523.1|Name=mRNA_H-elongata_contig59902.13523.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
EFLRKILEWAKREAKTASVDSVDSVDPSETETDQCPPSSPNSRLQKGTSD
VSSAGEDSCQICFEHEHSTAMLPCGHGGVCWDCGLQVFALTEECPMCRTK
IELLVRLDSSSRRIEGEEQFVSVISS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR037962Neuralized