mRNA_H-elongata_contig59877.13516.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59877.13516.1
Unique NamemRNA_H-elongata_contig59877.13516.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6A4ZHN9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZHN9_9STRA)

HSP 1 Score: 160 bits (406), Expect = 9.430e-45
Identity = 98/256 (38.28%), Postives = 145/256 (56.64%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAG--IAVPDVSCRRRANNKRDLSQQ--KEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLG-VKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKAT 753
            NLT +E+      LLA S  G+L +GAT +V   +G + R +  +W R +Q    G  +AV D   R     K  LS    + A++++P + R T R+++AA  + K+   RRM++     + S ++KP LT++ K  R+ + +SF+  +      F  M N+VHVDEKW+YL + K+R+YVF  E L    VQ K  I KVMF+  V RPR +  +N  F GK+G++PF E   A RSS NRP GT +T+P   T
Sbjct:   11 NLTDVERRVVYERLLAASIGGILPQGATADVARDFGCSTRTVARVWVRGKQSLREGSLVAVVDAKMRGNCGPKFKLSDDDIEVAVKTVPHEDRQTLRTMSAACQVAKSTLHRRMKNNPRFNARSSYVKPLLTDKHKATRVDFVKSFLRPALNSYHVFANMHNIVHVDEKWFYLSKIKRRFYVFHDEELALRAVQSKKFITKVMFMAAVARPRYDYTKNRMFDGKLGVWPFVESTLAIRSSKNRPKGTPITSPTTVT 266          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: Q75LI7_ORYSJ (Transposon protein, putative, Mariner sub-class n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q75LI7_ORYSJ)

HSP 1 Score: 166 bits (421), Expect = 2.070e-44
Identity = 103/259 (39.77%), Postives = 153/259 (59.07%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRRANNKR-----DLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLGVKSHSRFLKPALTNRDKLDRLRWARSFVSTST-GGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKATKE 759
            NLT I++      L+ ++ NG LR+ AT EV E +      + ++W+R +Q +A GI V +VS R++ N+ R     DLS     + ++PL+LR T RS A+A G+PK+   R +++  ++ HS  LKP L   +K  RL+W  S +   T     KF +MRN+VH+DEKW+   ++ + +Y+   E  P   VQ K+ I KVMFL  V RPR N      F GKIG++PFT+K  AQR+S NRP GT+VT  +K  ++
Sbjct:  140 NLTNIQRQEIYDALVKKTINGRLRKKATTEVAEMFNIKRGRVQDIWRRAKQCRAQGIPV-NVSSRKKTNSGRKKNEIDLSD----VANVPLQLRGTLRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISMLDWHTLPNEPKFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARPRYNEEGICTFDGKIGLWPFTKKEPAQRTSQNRPRGTLVTKTIKVDRD 393          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 6.530e-44
Identity = 97/258 (37.60%), Postives = 148/258 (57.36%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRRANNKRDLSQQKE----ALQSIPLKLRTTQRSVAAAVGLPKTAFRR-RMRDLGVKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKATKE 759
            NL   E+ A    +L  S  GVL RGA   +  + G +   ++ +WKR  + +  G    +V+ + R N+ R + +++     A++++P   R T RSVAA+V +P T   R +M +    + S +LKP LT+ +   RL +A SF+ +  G  + F++M ++VHVDEKW+YL + K  YY++D E L    VQ KSHI KVMFL  V RPR +  +   F GK+G++PF     A+RSS NRP GT+ T P+  T +
Sbjct:   28 NLRDSERRALFERMLEISSRGVLPRGAIVNLAREIGRDRATIMRVWKRGLETRKDGDGAANVASKIRGNSGRKVQRERSDIEAAIRAVPHARRRTLRSVAASVVIPLTTLHRHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVWPFVVDEPAKRSSKNRPKGTIETKPVSVTAD 285          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6G0WLU8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLU8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 8.690e-44
Identity = 93/253 (36.76%), Postives = 149/253 (58.89%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRR----ANNKRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRD-LGVKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPL 744
            NLT  E+     +LLA + +G L  G  G++ ++ G + + +  +W R Q     G    +V  +R+    A  K    + +EA++ +    R T RS+A+A G+PKTA  + M++   +K+ S ++KPAL+ ++K + +++A SF+     G   F+ M + VHVDEKW+++ + K+++YV+D E L    V+ KSHI ++MFL  V RPR +     +F GKIGI+P  + V AQRSS NRP GT+V  PL
Sbjct:   31 NLTESERRRVYCELLASTNDGNLAPGTFGKIAQQLGCHAKTVQRIWDRGQASIREGAMGANVDSKRKGKCGAKRKHSPLEIEEAIKRVDQIDRQTLRSLASASGIPKTAIVKHMKEEKRLKARSSYVKPALSEKNKEEHMKFALSFLQPGPCGKHIFSNMHDYVHVDEKWFFMAKVKRKFYVYDDEELALRSVKNKSHITEIMFLAAVARPRHDHHLKREFDGKIGIWPIVQNVAAQRSSKNRPKGTIVVAPL 283          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6A4ZER9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZER9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 9.180e-44
Identity = 98/252 (38.89%), Postives = 143/252 (56.75%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRRAN----NKRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLG-VKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTP 741
            NL   E+ A    LL RS  G L  GA  +V   Y  + R +  +WK+ +  ++    + DV+ +   N      R   + K A+QS+P   R T R++AA   +PKT   R M++   +K+   ++KP LT  +   RL +ARSF+   + GT  F+ M +VVHVDEKW+YL + K+++YV+D E + +  V+ K  I KVMFL  V RPR +  + T F GKIG++PF E V A+R+S NRP G  VT P
Sbjct:   21 NLKPTERRAVYEQLLERSIGGKLPYGAIQDVARWYYCHSRTIARIWKQGRLSQSLSHGLADVATKMTGNCGRKKTRTTEEIKAAVQSVPHYQRQTLRALAANSQIPKTTLIRHMKEQNSLKARFSYVKPMLTAENTRTRLDFARSFLRLLSDGTTVFSIMHDVVHVDEKWFYLTRVKKKFYVYDDEEVAARSVKSKHFITKVMFLAAVARPRYDHTRKTFFDGKIGVWPFVEVVAAKRTSRNRPKGAPVTMP 272          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A418AYL9_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYL9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 7.990e-43
Identity = 92/255 (36.08%), Postives = 146/255 (57.25%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAA-GIAVPDVSCRRRANN--KRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLGVKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKATK 756
            +LT  E+ +  HDLL   E G L +G    +  KYG + + +  +W+R Q  KA+ G+A   +  + R     K  L   + A++S+P  LR T   +A+  G+  T   R ++   ++  +  +KP LT++ K DR+ +ARSF+  +T    ++++M ++VH+DEKW+Y+    +RYY++  E +P  K   K HI KVMFL  V RPR +  +   + GKIG++PF  +  AQR+S NR  GTM+TTP   TK
Sbjct:    9 DLTDDERVSLYHDLLEHKEGGRLPQGKAKALLLKYGISRQTLSRVWRRGQDSKASTGVANVALLKQGRCGRPKKWSLDDMEAAVKSVPAHLRMTLAMLASTSGISSTTLWRLLKTKKLRRRTSRIKPMLTDKHKTDRMTFARSFLHETTRQGMRWHDMLDLVHIDEKWFYITMVNRRYYLWHDEAIPVRKCSSKRHIIKVMFLTAVARPRFDHAKKAMWDGKIGMWPFVTQAPAQRASKNRDRGTMITTPTTVTK 263          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6A4ZZC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZC0_9STRA)

HSP 1 Score: 154 bits (389), Expect = 7.050e-41
Identity = 94/255 (36.86%), Postives = 147/255 (57.65%), Query Frame = 1
Query:   16 EKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKA-AGIAVPDVSCRRRANN--KRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLGVKSHSRFLKPALT-----NRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKATK 756
            ++ +  H+LL   ENG L  G   E+ ++YG + + +  +WK  Q+ KA  G+A   +  + R     +R +   + A++++P  LR T RS+A + G+  T   R ++   ++  +  LKP +T     ++ K DR+ +ARSF+     G   +++M + VH+DEKW+Y+   K+RYY++  E LP  K   K HI KVMFL  V RPR +    T + GKIG++PF  +V AQR+S NRP GTMVT P+  TK
Sbjct:   14 QRLSLYHELLQHKENGRLPYGKGKELMQQYGLSKQTLSKIWKAGQESKARTGLANVAIKKKGRCGRPRRRSIKDLEVAIKAVPAHLRLTLRSLAVSSGIAPTTLWRLLQSKKLRRRTSHLKPMVTEPMVTDKHKADRVVFARSFLRQCRDGMM-WHDMMDRVHIDEKWFYVTMVKRRYYLWHDEDLPVRKCSSKRHIIKVMFLTAVARPRYDHGSKTMWDGKIGMWPFVSEVPAQRTSKNRPRGTMVTAPITVTK 267          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A485LDZ7_9STRA (Aste57867_20021 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDZ7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.540e-41
Identity = 92/250 (36.80%), Postives = 140/250 (56.00%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRRANN----KRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLG-VKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVT 735
            NL+ +E+  A   LLAR+E+GVL  GA   V   Y  +   +  LW R +     G  V D++ R + N+    KR   + ++A+++ P   R T R +    G+ KTA  R M+    +K+ S ++KP LT  +K+ RLR+A + +     GT  F  M N VH+DEKW++L + K+R+YV++ E +     + K  I KVMFL  V RPR +  +   F GK+GI+PF +   A R+S NRP GT++T
Sbjct:    6 NLSAVERRGAYEMLLARTEHGVLPYGAITGVARHYMCHRATISRLWSRARLSVDNGAPVADIAARIQGNSGAKRKRTADEIEQAIKAAPHDDRQTLRGLEVHSGIKKTAIIRHMKKKKKLKAKSNYVKPLLTQANKMTRLRFALNCLLPGPRGTHFFENMNNRVHIDEKWFFLTKVKKRFYVYEDEAVALRACKSKRFITKVMFLAAVARPRYDPHRRCVFDGKLGIWPFVKHAAAVRNSKNRPKGTIIT 255          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A485KB39_9STRA (Aste57867_3615 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB39_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.610e-40
Identity = 90/258 (34.88%), Postives = 147/258 (56.98%), Query Frame = 1
Query:    1 NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAG-----IAVPDVSCRRRANNKRDLSQQKEALQS----IPLKLRTTQRSVAAAVGLPKTAFRRRMRDLG-VKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPL 744
            NL+ IE+      LLA +  G L  GA     +++G +   +  LW R ++    G       V D+  ++R N+ R   +  +A+++    +P + R T R++AA  G+PKT   R M++   +K  S ++KPAL + +K++R+ +A  F+     G+  F++M N VHVDEKW++L + K+ +YV++ E L     + K  I KVMFL  V RPR +      F GK+GI+PF +++ A R+S NRP GT++TTP+
Sbjct:   21 NLSSIERRRVYDTLLALTVGGRLPYGAISNTAKQFGCHRTTVSKLWARARRSLLRGSLLRGALVADIDAKKRGNSGRPRRRSPDAIEAAIRAVPHEDRQTVRTLAAQSGIPKTLVIRHMQETKRLKGRSSYVKPALMDANKIERVNFAIGFLRPGPHGSHFFDDMYNRVHVDEKWFFLTKVKRTFYVYEDEELAHRAAKSKRFITKVMFLAAVARPRYDHHLKCTFDGKLGIWPFVQRIPAARNSKNRPRGTLITTPV 278          
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Match: A0A6A4Z6L6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6L6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.840e-40
Identity = 97/257 (37.74%), Postives = 143/257 (55.64%), Query Frame = 1
Query:    4 LTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQQQKAAGIAVPDVSCRRRANN----KRDLSQQKEALQSIPLKLRTTQRSVAAAVGLPKTAFRRRMRDLG-VKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTRKFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFLGVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKATKE 759
            L+ +E+ A    LL RS NG +  G        +  + + +  +WKR Q+    G  V  V+ R + N+    +R  S  + A++++PL  R   RSV    G+PKT   R M +   +KS S + KP LT  ++  R++ A SF+  S+     F+ M N VHVDEKW++L   K+RYY ++ E LPS  ++ K  I KVMFL  V RPR +  + + F GK+G++PF EKV A+R S NRP GT+VT P   T +
Sbjct:   64 LSDLERRAIYETLLGRSNNGRIAHGEYTTTAATFQCHWKTVARIWKRGQESLRNGSVVAVVNARFKGNSGPKVQRSPSDIRAAVKAVPLVARQILRSVVEHSGIPKTTLVRHMAEEDQLKSKSSYSKPFLTEDNERSRVKHAMSFLFQSSKKIT-FSNMHNFVHVDEKWFFLTTVKKRYYAYEDEVLPSRYLKSKRFITKVMFLAAVARPRYDFHKKSMFDGKLGVWPFIEKVPAKRGSKNRPKGTIVTVPQTVTAD 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59877.13516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4ZHN9_9STRA9.430e-4538.28Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
Q75LI7_ORYSJ2.070e-4439.77Transposon protein, putative, Mariner sub-class n=... [more]
A0A6A4ZEB5_9STRA6.530e-4437.60Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WLU8_9STRA8.690e-4436.76Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4ZER9_9STRA9.180e-4438.89Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418AYL9_9STRA7.990e-4336.08HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Ap... [more]
A0A6A4ZZC0_9STRA7.050e-4136.86Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LDZ7_9STRA8.540e-4136.80Aste57867_20021 protein n=1 Tax=Aphanomyces stella... [more]
A0A485KB39_9STRA1.610e-4034.88Aste57867_3615 protein n=2 Tax=Aphanomyces stellat... [more]
A0A6A4Z6L6_9STRA1.840e-4037.74Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59877contigH-elongata_contig59877:1457..2218 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.7
Seed ortholog evalue1.1e-37
Seed eggNOG ortholog67593.Physo125584
EggNOG OGs2CMKC@1,2QQNW@2759,3QH7V@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size762
Cds size762
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930969.8031173-CDS-H-elongata_contig59877:1456..22181622930969.8031173-CDS-H-elongata_contig59877:1456..2218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59877 1457..2218 -
1691679644.9904413-CDS-H-elongata_contig59877:1456..22181691679644.9904413-CDS-H-elongata_contig59877:1456..2218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59877 1457..2218 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59877.13516.1prot_H-elongata_contig59877.13516.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59877 1457..2218 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59877.13516.1

>prot_H-elongata_contig59877.13516.1 ID=prot_H-elongata_contig59877.13516.1|Name=mRNA_H-elongata_contig59877.13516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
NLTLIEKTAAIHDLLARSENGVLRRGATGEVGEKYGNNGRAMLNLWKRYQ
QQKAAGIAVPDVSCRRRANNKRDLSQQKEALQSIPLKLRTTQRSVAAAVG
LPKTAFRRRMRDLGVKSHSRFLKPALTNRDKLDRLRWARSFVSTSTGGTR
KFNEMRNVVHVDEKWWYLCQEKQRYYVFDGETLPSSKVQLKSHIPKVMFL
GVVGRPRRNTFQNTDFSGKIGIYPFTEKVRAQRSSGNRPAGTMVTTPLKA
TKE*
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mRNA from alignment at H-elongata_contig59877:1457..2218-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59877.13516.1 ID=mRNA_H-elongata_contig59877.13516.1|Name=mRNA_H-elongata_contig59877.13516.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=762bp|location=Sequence derived from alignment at H-elongata_contig59877:1457..2218- (Himanthalia elongata Himel1 dioecious)
AACCTCACCCTCATCGAAAAAACAGCAGCGATCCATGACCTCCTAGCCCG CTCCGAAAACGGTGTGCTCCGCAGGGGTGCTACTGGAGAGGTAGGCGAGA AATATGGCAACAATGGACGCGCCATGTTGAACCTGTGGAAAAGGTACCAG CAACAGAAGGCTGCGGGTATAGCTGTTCCTGATGTGTCCTGTCGCCGGAG GGCTAACAATAAGAGGGACCTAAGCCAGCAGAAAGAGGCACTGCAATCAA TCCCGCTGAAGCTGCGCACGACACAGCGGAGCGTAGCTGCAGCGGTCGGG CTCCCGAAGACAGCTTTTCGCCGCCGCATGAGGGACCTAGGGGTGAAGTC TCACTCGCGTTTCCTGAAGCCGGCTCTTACCAATCGTGACAAGCTGGATC GGCTGAGGTGGGCGAGAAGCTTTGTTTCGACGTCTACGGGGGGAACTCGC AAATTCAATGAGATGAGGAACGTGGTTCATGTCGACGAGAAGTGGTGGTA CCTTTGCCAAGAGAAACAGAGGTACTACGTGTTCGACGGCGAGACCTTAC CCTCAAGTAAGGTTCAGCTTAAGAGCCATATCCCGAAGGTGATGTTTCTC GGAGTTGTTGGGCGGCCGAGGCGCAACACCTTCCAAAACACCGACTTCTC CGGAAAGATCGGGATCTACCCCTTCACTGAGAAAGTGCGAGCCCAGCGCA GCAGCGGGAACAGGCCCGCGGGCACAATGGTCACCACGCCTTTGAAGGCG ACGAAGGAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig59877:1457..2218-

>mRNA_H-elongata_contig59877.13516.1 ID=mRNA_H-elongata_contig59877.13516.1|Name=mRNA_H-elongata_contig59877.13516.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at H-elongata_contig59877:1457..2218- (Himanthalia elongata Himel1 dioecious)
AACCTCACCCTCATCGAAAAAACAGCAGCGATCCATGACCTCCTAGCCCG
CTCCGAAAACGGTGTGCTCCGCAGGGGTGCTACTGGAGAGGTAGGCGAGA
AATATGGCAACAATGGACGCGCCATGTTGAACCTGTGGAAAAGGTACCAG
CAACAGAAGGCTGCGGGTATAGCTGTTCCTGATGTGTCCTGTCGCCGGAG
GGCTAACAATAAGAGGGACCTAAGCCAGCAGAAAGAGGCACTGCAATCAA
TCCCGCTGAAGCTGCGCACGACACAGCGGAGCGTAGCTGCAGCGGTCGGG
CTCCCGAAGACAGCTTTTCGCCGCCGCATGAGGGACCTAGGGGTGAAGTC
TCACTCGCGTTTCCTGAAGCCGGCTCTTACCAATCGTGACAAGCTGGATC
GGCTGAGGTGGGCGAGAAGCTTTGTTTCGACGTCTACGGGGGGAACTCGC
AAATTCAATGAGATGAGGAACGTGGTTCATGTCGACGAGAAGTGGTGGTA
CCTTTGCCAAGAGAAACAGAGGTACTACGTGTTCGACGGCGAGACCTTAC
CCTCAAGTAAGGTTCAGCTTAAGAGCCATATCCCGAAGGTGATGTTTCTC
GGAGTTGTTGGGCGGCCGAGGCGCAACACCTTCCAAAACACCGACTTCTC
CGGAAAGATCGGGATCTACCCCTTCACTGAGAAAGTGCGAGCCCAGCGCA
GCAGCGGGAACAGGCCCGCGGGCACAATGGTCACCACGCCTTTGAAGGCG
ACGAAGGAATGAAACCTCACCCTCATCGAAAAAACAGCAGCGATCCATGA
CCTCCTAGCCCGCTCCGAAAACGGTGTGCTCCGCAGGGGTGCTACTGGAG
AGGTAGGCGAGAAATATGGCAACAATGGACGCGCCATGTTGAACCTGTGG
AAAAGGTACCAGCAACAGAAGGCTGCGGGTATAGCTGTTCCTGATGTGTC
CTGTCGCCGGAGGGCTAACAATAAGAGGGACCTAAGCCAGCAGAAAGAGG
CACTGCAATCAATCCCGCTGAAGCTGCGCACGACACAGCGGAGCGTAGCT
GCAGCGGTCGGGCTCCCGAAGACAGCTTTTCGCCGCCGCATGAGGGACCT
AGGGGTGAAGTCTCACTCGCGTTTCCTGAAGCCGGCTCTTACCAATCGTG
ACAAGCTGGATCGGCTGAGGTGGGCGAGAAGCTTTGTTTCGACGTCTACG
GGGGGAACTCGCAAATTCAATGAGATGAGGAACGTGGTTCATGTCGACGA
GAAGTGGTGGTACCTTTGCCAAGAGAAACAGAGGTACTACGTGTTCGACG
GCGAGACCTTACCCTCAAGTAAGGTTCAGCTTAAGAGCCATATCCCGAAG
GTGATGTTTCTCGGAGTTGTTGGGCGGCCGAGGCGCAACACCTTCCAAAA
CACCGACTTCTCCGGAAAGATCGGGATCTACCCCTTCACTGAGAAAGTGC
GAGCCCAGCGCAGCAGCGGGAACAGGCCCGCGGGCACAATGGTCACCACG
CCTTTGAAGGCGACGAAGGAATGA
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