mRNA_H-elongata_contig59853.13507.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59853.13507.1
Unique NamemRNA_H-elongata_contig59853.13507.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 7.480e-148
Identity = 217/314 (69.11%), Postives = 251/314 (79.94%), Query Frame = 1
Query:    1 FTGRGGDDVGITGSDLLSGTGELTDLGSAFVETYQDLQKCGGITTSMTISXXXXXXXXXDSFT-TSIGLTDVDPDASEVTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTDSLSRTSKWTPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQFAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGGSDGTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            FTGRGGDDVG+TGSDLLS TG LT +GS FVETYQDLQ+C  +T+S++            +   T  G+TDVDP+A+E+TNVVI NLGG GTY +VV M  G  + C   +AACV++EVSVSG L+PFDE V+VAFRGPMNI+NIVWFEG  DSLS+TS WTP TSNNLVFM N GG T C+G WTICGG+SQSY+DE+G  C +EP QF+GVLG D+ V I +STEC D  +CGFYR TGMEGW GG DG+KVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVD+ADM+ TTVYDFKGTG+PGH KYF RPS
Sbjct:  346 FTGRGGDDVGVTGSDLLSATGVLTKVGSVFVETYQDLQRCEDMTSSLSTGILPSSTPTNIAEPGTMTGMTDVDPEATEITNVVIGNLGGTGTYMDVVGMDPGADMHCPSTEAACVQKEVSVSGTLAPFDEAVSVAFRGPMNIHNIVWFEGEADSLSKTSAWTPVTSNNLVFMTNQGGYTECSGEWTICGGSSQSYADETGSSCASEPKQFSGVLGGDQGVNIMTSTECADDSTCGFYRDTGMEGWSGGLDGSKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDHADMMFTTVYDFKGTGAPGHGKYFNRPS 659          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 6.310e-53
Identity = 111/247 (44.94%), Postives = 142/247 (57.49%), Query Frame = 1
Query:  208 DVDPDASEVTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTD-SLSRTSKWTP-TTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQFAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGGSDGTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTT---VYDFKGTGSPGHDKYFLR 933
            DVDP A+ +TN VI+N+GG G Y +VV M  GE + C   D ACVKEEV V+G L+PFDE V+V+FRGPMN+YNI WFEG  D +L RT+ WTP    +N+ FMNN GG + C+G W+ICGGNSQS++D +                                                      ++RTAQYGCNCRGAGGNGGCGEFDI+E ++G  Y+DML TT    Y     G+ G  + +L+
Sbjct:  359 DVDPLATVITNAVIANVGGAGYYDDVVDMIDGENMNCPSYDDACVKEEVCVNGGLAPFDE-VSVSFRGPMNLYNIAWFEGTADGTLERTTSWTPGELGDNIAFMNNRGGLSDCSGEWSICGGNSQSFADAT------------------------------------------------------ILRTAQYGCNCRGAGGNGGCGEFDIIEGIVGNKYSDMLFTTEKTTYAAIFRGNSGDSESYLQ 550          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: UPI0004416550 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416550)

HSP 1 Score: 182 bits (462), Expect = 2.750e-51
Identity = 110/265 (41.51%), Postives = 150/265 (56.60%), Query Frame = 1
Query:  223 ASEVTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFE-GNTDSLS--RTSKWTP-TTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQ-FAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGG------------SDGT---------KVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            +  +T V  +++GG+G+YQ V  +  G    CS  + +CVK   +VSG L+PFDED+ V  RGPMN+YNI  ++  NT S +  RTS W     ++NLVFMNN GG  G +G W+ICGG SQSY+          P Q +   + + +EV I ++TEC   +  GFYRGT   GW G             SD           +VVR+AQYGCNCRG GG GGCGE D+VE ++  D+ +  ++ +Y FKG    G   YF RP+
Sbjct:   35 SGSLTAVRYTHVGGDGSYQQVTDLVPGTFPTCS-ANPSCVKTTKTVSGNLAPFDEDLTVVMRGPMNVYNIAVYQPDNTTSATWKRTSSWASGNAAHNLVFMNNNGG--GASGEWSICGGASQSYASSDFSSAAASPKQTYGSYISASDEVNIMTATECNGSNCEGFYRGTSNLGWAGSKMFVFEFDMPSDSDSVTPAIWALNGQVVRSAQYGCNCRGEGGEGGCGEIDLVENLVDADH-NQGISEIYSFKGATGTGTGNYFARPT 295          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: A0A165PHX7_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165PHX7_9AGAM)

HSP 1 Score: 178 bits (451), Expect = 1.060e-49
Identity = 104/257 (40.47%), Postives = 146/257 (56.81%), Query Frame = 1
Query:  250 SNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFE----GNTDSLSRTSKW-TPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPT--QFAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGW-------------HGGSD-------GTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            +N+GG G+YQ V ++  G    CS  + +C++   +VSG L+PF+ED+ + FRGPM ++N+  ++      T + S+ S W    T +NLVFMNN GGST  +G W+IC G+SQSY++ +       PT   +AG L   +EV I +  ECT     GF+RGT  EGW              GGS          ++VR+AQYGCNCRG G +GGCGE D+VE + G D  +  ++ VY FKG    G   YF RP+
Sbjct:   39 TNVGGTGSYQQVTNIIPGTFPTCS-ANPSCIQTTKTVSGSLAPFNEDLTMVFRGPMTLHNVAVYQPANSSGTSAWSKVSSWGAGGTGSNLVFMNNKGGST--SGTWSICAGSSQSYANAAFSDAAASPTGLSYAGDLPDGQEVNIMTDIECTASSCDGFFRGTANEGWADSKMFIMEVEMPSGGSTPPAIWALNAQIVRSAQYGCNCRGVGADGGCGELDVVEVISGQDQ-NQGISEVYSFKGATGTGSSAYFTRPT 291          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: A0A1H7X6D6_STIAU (Glycine-rich protein domain n=1 Tax=Stigmatella aurantiaca TaxID=41 RepID=A0A1H7X6D6_STIAU)

HSP 1 Score: 176 bits (447), Expect = 7.220e-49
Identity = 109/272 (40.07%), Postives = 140/272 (51.47%), Query Frame = 1
Query:  214 DPDASEVTNVVISNLGGNGTYQNVVSMASGE-GLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTDSLSRTSKWTPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQFAGVLGSDEEVQIASSTECT---DYDSCGFYRGTGMEGWHGGSD---------------------------GTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRP 936
            D   + V+ + I N+GG G YQ V +M  G  G  C     AC K   +VSG L+PF+E++ V FRGPM +Y+I  +  +  +  RTS W    S NL F NNLGG TG +G WT+CGGNSQSY+    +     PT+F G LG+  E+ I S   C    D   CGFYRG    GW G                                +VVRTAQYGCNCRG G  GGCGE D+ E + G  +     +T+Y F+G    G + YF+RP
Sbjct:   69 DGTGTSVSTMSILNVGGTGAYQRVTNMLPGVWGQSCPSN--ACQKATTNVSGALAPFNEEMTVNFRGPMELYDIAVYRPDATAWKRTSSWNRCGSTNLTFFNNLGG-TG-SGEWTLCGGNSQSYASADAKTAVAAPTRFTGTLGNRVEMNILSDQACVGTGDASECGFYRGVTRHGWAGAKLFAIRARMPRYTGPITEYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVLHG-GHPMHATSTIYSFEGATGSGPN-YFMRP 334          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: A0A250IPV1_9DELT (Uncharacterized protein n=2 Tax=Melittangium boletus TaxID=83453 RepID=A0A250IPV1_9DELT)

HSP 1 Score: 176 bits (447), Expect = 8.120e-49
Identity = 111/272 (40.81%), Postives = 139/272 (51.10%), Query Frame = 1
Query:  214 DPDASEVTNVVISNLGGNGTYQNVVSMASGE-GLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTDSLSRTSKWTPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQFAGVLGSDEEVQIASSTECT---DYDSCGFYRGTGMEGWHGGSD---------------------------GTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRP 936
            D   + V+ + I N+GG G+YQ V +M  G  G  C     AC K   SVSG L+PF+E++ V FRGPM +Y+I  +   + S SR S W    S NL F NNLGG TG +G WT+CGGNSQSY+   G+     PT+F G L +  E+ I S   C    D   CGFYRG    GW G                                +VVRTAQYGCNCRG G  GGCGE D+ E + G        +T+Y F+G    G + YF RP
Sbjct:   74 DGTGTPVSTMSILNVGGTGSYQRVTNMLPGVWGQTCPSN--ACQKATTSVSGALAPFNEEMTVNFRGPMELYDIAVYRPGSGSWSRVSSWNRCGSTNLTFFNNLGG-TG-SGEWTLCGGNSQSYASADGKTAAAAPTRFTGSLANRTEMNILSDQPCIGTGDSSECGFYRGVTRHGWGGAKIFAIRARMPRYTGPKTEYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVLHGESPLHAT-STIYSFEGATGSGPN-YFQRP 339          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: S7RLB6_GLOTA (Uncharacterized protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RLB6_GLOTA)

HSP 1 Score: 176 bits (445), Expect = 8.200e-49
Identity = 106/262 (40.46%), Postives = 153/262 (58.40%), Query Frame = 1
Query:  232 VTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFE-GNTDSL--SRTSKWTPTTS-NNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQ--FAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGW-------------HGGSD-------GTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            +T++  +N+GG+G+YQ V +M  G    C D + +C+++   +SG L+PF+ED+ + FRGPMN++NI  ++ GN+     S+ S W    S +NLVFMNN GGST  +G W+ICGG+SQSY++ +       P+   + G L   +EV I +ST CT     GF+RGT   GW              GGS          ++VR+AQYGCNCRG G  GGCGE D+VE + G D  +  ++ +Y FKG    G D +F RP+
Sbjct:   36 LTSLKYTNVGGSGSYQQVTNMLPGTFPTC-DVNPSCIQQPKQISGNLAPFNEDLTMVFRGPMNLHNIAVYQPGNSTGATWSQVSSWAAGGSGSNLVFMNNKGGST--SGEWSICGGSSQSYANGAFTDAAASPSASTYTGNLPDGQEVNIMTSTACTSSTCDGFFRGTANLGWADSKMFVMEVEMPSGGSTPPAIWALNGQIVRSAQYGCNCRGQGSPGGCGELDVVEVISGQDQ-NQGISEIYSFKGATGTGSDAFFSRPA 293          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: A0A165D0F9_9APHY (Uncharacterized protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165D0F9_9APHY)

HSP 1 Score: 175 bits (443), Expect = 8.680e-49
Identity = 105/263 (39.92%), Postives = 150/263 (57.03%), Query Frame = 1
Query:  232 VTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTDSLS---RTSKWTPT-TSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGC--TTEPTQFAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGG-----------SDGT----------KVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            +T +  + +G +G+Y  +  + +GE   C+  D  CV    +VSG L+PFD++V +AFRGPMNIYN+  ++ +  S S   + S W     +NNLVFMNN GG    +GVW++CGG+SQSY++ + +G   + E T  +G L   EE+ I +ST C + +  GF RGT   GW G            SDG           +VVR AQYGCNCRG GG+GGCGE D++E +   D     ++ +Y FKG    G  +YF RP+
Sbjct:    7 ITALKYTGVGASGSYNQITDLVAGEWPSCTITDF-CVGSTKAVSGALAPFDDEVTMAFRGPMNIYNVAVYQPSNQSASTWSQVSSWASGGDANNLVFMNNNGGDG--SGVWSVCGGSSQSYANSTWDGAAASAEGTP-SGSLADGEEINIMTSTTCEELECDGFSRGTSNHGWTGSKMIVMTFDMPDSDGANIPAIWALNAQVVRAAQYGCNCRGEGGDGGCGELDVLEVLANSD-TTQAISEIYSFKGATGTGSAEYFARPT 264          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: E3G0R9_STIAD (Lipoprotein n=3 Tax=Stigmatella TaxID=40 RepID=E3G0R9_STIAD)

HSP 1 Score: 176 bits (446), Expect = 1.140e-48
Identity = 108/272 (39.71%), Postives = 142/272 (52.21%), Query Frame = 1
Query:  214 DPDASEVTNVVISNLGGNGTYQNVVSMASGE-GLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGNTDSLSRTSKWTPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQFAGVLGSDEEVQIASSTECT---DYDSCGFYRGTGMEGWHGGSD---------------------------GTKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRP 936
            D   + V+ + I N+GG G+YQ V +M  G  G  C     AC K   +VSG L+PF+E++ V FRGPM +Y+I  ++ +  S  R S W    S NL F NNLGG TG +G WT+CGGNSQSY+    +     PT+F G LG+  E+ I +   C    D   CGFYRG    GW G                                +VVRTAQYGCNCRG G  GGCGE D+ E + G ++     +T+Y F+G    G + YF+RP
Sbjct:   74 DGTGTSVSTMSILNVGGTGSYQRVTNMLPGVWGQSCPSN--ACQKATSNVSGALAPFNEELTVNFRGPMELYDIAVYKPDAASWKRVSSWNRCASTNLTFFNNLGG-TG-SGEWTLCGGNSQSYASADAKTAVAAPTRFTGTLGNRVEMNILADQPCVGTGDASECGFYRGVTRHGWAGAKLFAIRARMPRYTGPITEYYDDVPAIWMLNARVVRTAQYGCNCRGMGSPGGCGELDVAEVLHG-EHPMHATSTIYSFEGATGSGPN-YFMRP 339          
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Match: A0A1X6MZQ9_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MZQ9_9APHY)

HSP 1 Score: 174 bits (441), Expect = 2.900e-48
Identity = 108/263 (41.06%), Postives = 150/263 (57.03%), Query Frame = 1
Query:  232 VTNVVISNLGGNGTYQNVVSMASGEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFE-GNTDSL--SRTSKWTPT-TSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGEGCTTEPTQ-FAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGG------------SDGT----------KVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGTGSPGHDKYFLRPS 939
            +T +  + +GG+G+YQ V +M +G    C+  + +C +    VSG L+PFD+++ VAFRGP+N+ NI  ++ GN+ +   S+TS W     +NNLVFMNN+GG  G +G WTICGG SQSY++ + +G    PT   +G L    E+ I ++  C D    GF RGT   GW G             SD +          +VVR AQYGCNCRG GGNGGCGE DI+E + G D  D  ++ +Y FKG    G    F RP+
Sbjct:   30 LTGIKYTGVGGSGSYQEVTNMVAGTWPSCT-ANPSCEQSPKEVSGNLAPFDDEITVAFRGPLNVKNIAVYQPGNSSAATWSQTSSWAAGGDTNNLVFMNNMGG--GLSGEWTICGGASQSYANGTWDGSAASPTTGTSGYLPETMEINIMTNETCADSACSGFSRGTANHGWSGSKLMVLTFNMPPSSDASNVPAIWALNAQVVRAAQYGCNCRGEGGNGGCGELDILEVIAGSDI-DNAISEIYSFKGATGSGASA-FPRPT 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59853.13507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKU0_ECTSI7.480e-14869.11Putative serine rich protein n=2 Tax=Ectocarpus Ta... [more]
D8LG92_ECTSI6.310e-5344.94F5/8 type C domain protein n=1 Tax=Ectocarpus sili... [more]
UPI00044165502.750e-5141.51hypothetical protein n=1 Tax=Punctularia strigosoz... [more]
A0A165PHX7_9AGAM1.060e-4940.47Uncharacterized protein n=1 Tax=Neolentinus lepide... [more]
A0A1H7X6D6_STIAU7.220e-4940.07Glycine-rich protein domain n=1 Tax=Stigmatella au... [more]
A0A250IPV1_9DELT8.120e-4940.81Uncharacterized protein n=2 Tax=Melittangium bolet... [more]
S7RLB6_GLOTA8.200e-4940.46Uncharacterized protein n=1 Tax=Gloeophyllum trabe... [more]
A0A165D0F9_9APHY8.680e-4939.92Uncharacterized protein n=1 Tax=Laetiporus sulphur... [more]
E3G0R9_STIAD1.140e-4839.71Lipoprotein n=3 Tax=Stigmatella TaxID=40 RepID=E3G... [more]
A0A1X6MZQ9_9APHY2.900e-4841.06Uncharacterized protein n=2 Tax=Postia placenta Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59853contigH-elongata_contig59853:199..3396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.7
Seed ortholog evalue2.2e-123
Seed eggNOG ortholog2880.D7FKU0
Preferred nameTOS1
GOsGO:0000271,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0003843,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005975,GO:0005976,GO:0006073,GO:0006074,GO:0006075,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009272,GO:0009277,GO:0009987,GO:0010383,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0033692,GO:0034406,GO:0034407,GO:0034410,GO:0034411,GO:0034637,GO:0034645,GO:0035251,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0051273,GO:0051274,GO:0051278,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0071969,GO:0071970,GO:1901576
EggNOG free text desc.Putative TOS1-like glycosyl hydrolase (DUF2401)
EggNOG OGs2CBPA@1,2QSI7@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised protein family, glycosyl hydrolase catalytic domain
Ec32 orthologEc-17_001360.2
Exons7
Model size939
Cds size939
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930968.838418-CDS-H-elongata_contig59853:198..3921622930968.838418-CDS-H-elongata_contig59853:198..392Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 199..392 +
1691679644.5250914-CDS-H-elongata_contig59853:198..3921691679644.5250914-CDS-H-elongata_contig59853:198..392Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 199..392 +
1622930968.8596463-CDS-H-elongata_contig59853:801..9551622930968.8596463-CDS-H-elongata_contig59853:801..955Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 802..955 +
1691679644.5361137-CDS-H-elongata_contig59853:801..9551691679644.5361137-CDS-H-elongata_contig59853:801..955Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 802..955 +
1622930968.8760169-CDS-H-elongata_contig59853:1296..14361622930968.8760169-CDS-H-elongata_contig59853:1296..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 1297..1436 +
1691679644.5461724-CDS-H-elongata_contig59853:1296..14361691679644.5461724-CDS-H-elongata_contig59853:1296..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 1297..1436 +
1622930968.8927333-CDS-H-elongata_contig59853:1941..20471622930968.8927333-CDS-H-elongata_contig59853:1941..2047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 1942..2047 +
1691679644.5561094-CDS-H-elongata_contig59853:1941..20471691679644.5561094-CDS-H-elongata_contig59853:1941..2047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 1942..2047 +
1622930968.9156744-CDS-H-elongata_contig59853:2223..23301622930968.9156744-CDS-H-elongata_contig59853:2223..2330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 2224..2330 +
1691679644.5659077-CDS-H-elongata_contig59853:2223..23301691679644.5659077-CDS-H-elongata_contig59853:2223..2330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 2224..2330 +
1622930968.9312267-CDS-H-elongata_contig59853:2708..27631622930968.9312267-CDS-H-elongata_contig59853:2708..2763Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 2709..2763 +
1691679644.5771534-CDS-H-elongata_contig59853:2708..27631691679644.5771534-CDS-H-elongata_contig59853:2708..2763Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 2709..2763 +
1622930968.9482133-CDS-H-elongata_contig59853:3213..33961622930968.9482133-CDS-H-elongata_contig59853:3213..3396Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 3214..3396 +
1691679644.5892644-CDS-H-elongata_contig59853:3213..33961691679644.5892644-CDS-H-elongata_contig59853:3213..3396Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59853 3214..3396 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59853.13507.1prot_H-elongata_contig59853.13507.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59853 199..3396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59853.13507.1

>prot_H-elongata_contig59853.13507.1 ID=prot_H-elongata_contig59853.13507.1|Name=mRNA_H-elongata_contig59853.13507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
FTGRGGDDVGITGSDLLSGTGELTDLGSAFVETYQDLQKCGGITTSMTIS
TTSSTTSSNDSFTTSIGLTDVDPDASEVTNVVISNLGGNGTYQNVVSMAS
GEGLVCSDEDAACVKEEVSVSGPLSPFDEDVAVAFRGPMNIYNIVWFEGN
TDSLSRTSKWTPTTSNNLVFMNNLGGSTGCNGVWTICGGNSQSYSDESGE
GCTTEPTQFAGVLGSDEEVQIASSTECTDYDSCGFYRGTGMEGWHGGSDG
TKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDYADMLLTTVYDFKGT
GSPGHDKYFLRPS
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mRNA from alignment at H-elongata_contig59853:199..3396+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59853.13507.1 ID=mRNA_H-elongata_contig59853.13507.1|Name=mRNA_H-elongata_contig59853.13507.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3198bp|location=Sequence derived from alignment at H-elongata_contig59853:199..3396+ (Himanthalia elongata Himel1 dioecious)
TTCACTGGGCGAGGTGGTGACGATGTTGGCATCACCGGAAGCGATCTACT CTCCGGCACGGGCGAGTTAACCGACCTCGGGAGCGCTTTTGTCGAGACCT ATCAGGACCTGCAGAAGTGCGGGGGCATCACCACGTCTATGACCATATCC ACGACCTCCTCCACTACCTCGTCCAATGACTCCTTCACTACCTCGTCCAC GAACTCCAGCACTTCTTCCAGCAGCTTTTCATTGTCATCCTACGTCGCTG GTGAGCGAAAAAACGGAGGCGCCGTCGGCGAACGGTCAGATGGTGGTTGG CCTTGATGTGTGTGTGTCTTGAGGGGGGGGGGGGGGTGTCGCTGTGTCGT GTGGATAATTTCTGGAACGTGATGACCATAATTATTCATTTTGATGCGCT GATGCTGCTGCCGTGGCTGTTGGTCATTGGTCATCTTGGTGCATTCTACA AGTTGTCTCCTCAGTTATAATGAACCTTAACATATCATCTGCGATGCGGG AACATGCTCCCCGCCCCCCGATCTACTAAAAGTAGAGCGGCATGAATATT CCTGTTCGCGCCCTTTTTTCCACCGTCGGCGCCTTCGCAGTACCCGGAGA GAGCATCGGATTGACCGATGTGGACCCTGACGCGTCCGAAGTGACTAACG TGGTGATCAGCAACCTCGGTGGCAACGGCACCTACCAGAATGTCGTGTCC ATGGCTTCCGGCGAGGGCCTGGTGTGCTCGGATGAGGATGCTGCCTGCGT GAAAGAGGTCAGTCAGCCATTCTCCTCGCGGTGTCAAGGAGTTCAATTTC CAGGACCCATGCGTCTGTAAGATTGGGCACCCATGACAAAGCTTCAGCTA CTGGGAGTGCTCACAGTTCCTGCCGATAAATAGAACACACCTTGGAAACC TCGATGTATATTTTCAACCTAAATACCTTTCGTGTAGGTTGCGACGCATT GTTCAACTGCGCGCACACGTACCAAACCGTCAAGTTGTGGACGTTTCCTA GAAGGTTCCCGTCGTGTGCCGCTCGTCCACTCTCCACTCTTGTGGTGACG CTTGCATGTCTGCCTGCCGGCCTACGCGCGGTGCATTTTCGACGGCAGGA AGTGAGCGTGAGCGGCCCTCTGTCCCCCTTCGACGAGGACGTTGCCGTGG CCTTCCGCGGTCCCATGAACATCTACAACATCGTCTGGTTCGAGGGCAAC ACCGACTCCTTGAGTCGAACTTCCAAGTGGACGCCCACGTAGGTTTTAAA TTTACGACCGCGACCAACCCGCTCGGTCGACGCAGATGTCCGATATTCTT GTCAAATGCATCCGCTTGCGGAACATATTTAGCGCGTGTGCCGACACGAT GACGCGGTCCATCTTGAACGTTGTTCGTTGCTCTCATGTTTCAAATGTAC TAGACGATATACTGTCGGCGGAAATATCTAACCTATCTAACCTATCTAAC CTATCTAATCTCAATCAAGGATATAACCTGCAATATAATTTCCACTCACT CCCTTCTCCTTGACTTGACTCTCTCATCTCTAGATATATTGGTGTACCGT ATTTCTCTGTCGCTGAGATCGACGGTGCCGCTCGTAGGTGACTTTGTCTA ACACCGGTTCTTTCTGAACTTGTAGCGTTACCCCCCCCCCCCTCTCCCTT TCGCTCTATTTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGGGCCCTGAT CCTAACCATGCCCCTGACCTCCATGTTGGACTGCCACCAACAGTACCTCG AATAACTTGGTGTTCATGAACAACCTGGGCGGATCGACTGGGTGCAACGG TGTTTGGACCATTTGCGGAGGCAATAGCCAGAGCTACTCCGACGAGAGTG TGAGTCAATCTCATCGATCAGGGGTGGCGGTGTACTGTTGCTTTCTTCGA CCCTTCTCTTAACACACAATCCTCCGTGTCGCCCTTCCTAGTGCTGACCA TCCCTTCCGGATACGCATCTGACGCGCGCCAAATCGTCTGTACCCCTGCC ACGTATGTGTTTGTGCGTGTCACAGGGTGAAGGGTGCACCACTGAGCCCA CTCAATTCGCCGGTGTACTCGGGAGCGACGAGGAGGTGCAGATTGCCTCG AGCACGGAGTGCACCGACTACGACTCATGCGGGTGAGAACTATGAACTTG GACAATCTTGGACAATCTTGGATTAATATTTTATCGATTCAACGGTGGCA AGCTGTCCTGTCCTCGGTTGGCACCTCCTCTCAAACCTCGAGTGTTGGCC GTGGTGAAAGCGCCTCGAGTCGTGTTCTTCGCCTCTTGGGTAAGACCCCT GTGTTCATGTTTTCACCATGGGAGATGTGTCGCCCCTTTCGTTTCGCCGC GCCTTTCCGTTCCGGCTTTATATTACCGTTGACATGACCGTTGACATGAC CGTTGGCATTACGGTTGACAGGATAAGTTAAACGCAAGGGTGGTTCTGTA CGAGTGTGTCGGATATTCGTGAATACCCTATGCACCCCCTCTTCTCTCAC CCCCCCCAAGGTTTTACCGTGGCACGGGCATGGAAGGGTGGCATGGCGGG TCGGACGGCACCAAGGTCATGGTGTTCGAGGTTGACATGCCTCACTGTGG AACGGAGGGCTTCAGCGATTGCGAGTACAACAGACCCGCCGTCTGGGCAC TCAACGGCAAGGTTAGTTAGTTGATTGCGCTCGCTCGTCACATGTTGTAC ATTTTAGGGTACCCCTTCCACCGCACAAGCACCGAGGGTCACTGACCTCG AGGAACATATCTCGGTTCGTGCGTTGCGGGATGTGCACCAAGTCCTTCGG CGTGGTTCGAGCGACAAAGCCTGCGACGAGGTAGACCTCATGGCACAGAC AGCAGGATCTCTTCAAACGTGCGCAGTCGATAGTCTCGTGACGACCCCCC CTGAACGTGTAATAAGAGGGGGGTCTCTAGAAGAGCGTTGTAGCGTTCCC ATGTCGTTTTTAAACCCACGCTGTATTAAAAAATAAATATATATATATAT ATATATGACCCTCAGGTCGTGCGCACAGCCCAGTACGGGTGCAACTGCCG TGGCGCCGGCGGAAACGGCGGTTGCGGGGAGTTCGACATCGTGGAAGCGG TAATCGGAGTGGATTATGCCGACATGCTCTTGACCACCGTGTATGATTTC AAGGGCACAGGATCTCCTGGACACGACAAGTACTTCCTCAGGCCCTCG
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Coding sequence (CDS) from alignment at H-elongata_contig59853:199..3396+

>mRNA_H-elongata_contig59853.13507.1 ID=mRNA_H-elongata_contig59853.13507.1|Name=mRNA_H-elongata_contig59853.13507.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1878bp|location=Sequence derived from alignment at H-elongata_contig59853:199..3396+ (Himanthalia elongata Himel1 dioecious)
TTCACTGGGCGAGGTGGTGACGATGTTGGCATCACCGGAAGCGATCTACT
CTCCGGCACGGGCGAGTTAACCGACCTCGGGAGCGCTTTTGTCGAGACCT
ATCAGGACCTGCAGAAGTGCGGGGGCATCACCACGTCTATGACCATATCC
ACGACCTCCTCCACTACCTCGTCCAATGACTCCTTCACTACCTCTTCACT
GGGCGAGGTGGTGACGATGTTGGCATCACCGGAAGCGATCTACTCTCCGG
CACGGGCGAGTTAACCGACCTCGGGAGCGCTTTTGTCGAGACCTATCAGG
ACCTGCAGAAGTGCGGGGGCATCACCACGTCTATGACCATATCCACGACC
TCCTCCACTACCTCGTCCAATGACTCCTTCACTACCTCCATCGGATTGAC
CGATGTGGACCCTGACGCGTCCGAAGTGACTAACGTGGTGATCAGCAACC
TCGGTGGCAACGGCACCTACCAGAATGTCGTGTCCATGGCTTCCGGCGAG
GGCCTGGTGTGCTCGGATGAGGATGCTGCCTGCGTGAAAGAGCATCGGAT
TGACCGATGTGGACCCTGACGCGTCCGAAGTGACTAACGTGGTGATCAGC
AACCTCGGTGGCAACGGCACCTACCAGAATGTCGTGTCCATGGCTTCCGG
CGAGGGCCTGGTGTGCTCGGATGAGGATGCTGCCTGCGTGAAAGAGGAAG
TGAGCGTGAGCGGCCCTCTGTCCCCCTTCGACGAGGACGTTGCCGTGGCC
TTCCGCGGTCCCATGAACATCTACAACATCGTCTGGTTCGAGGGCAACAC
CGACTCCTTGAGTCGAACTTCCAAGTGGACGCCCACGAAGTGAGCGTGAG
CGGCCCTCTGTCCCCCTTCGACGAGGACGTTGCCGTGGCCTTCCGCGGTC
CCATGAACATCTACAACATCGTCTGGTTCGAGGGCAACACCGACTCCTTG
AGTCGAACTTCCAAGTGGACGCCCACTACCTCGAATAACTTGGTGTTCAT
GAACAACCTGGGCGGATCGACTGGGTGCAACGGTGTTTGGACCATTTGCG
GAGGCAATAGCCAGAGCTACTCCGACGAGAGTTACCTCGAATAACTTGGT
GTTCATGAACAACCTGGGCGGATCGACTGGGTGCAACGGTGTTTGGACCA
TTTGCGGAGGCAATAGCCAGAGCTACTCCGACGAGAGTGGTGAAGGGTGC
ACCACTGAGCCCACTCAATTCGCCGGTGTACTCGGGAGCGACGAGGAGGT
GCAGATTGCCTCGAGCACGGAGTGCACCGACTACGACTCATGCGGGGTGA
AGGGTGCACCACTGAGCCCACTCAATTCGCCGGTGTACTCGGGAGCGACG
AGGAGGTGCAGATTGCCTCGAGCACGGAGTGCACCGACTACGACTCATGC
GGGTTTTACCGTGGCACGGGCATGGAAGGGTGGCATGGCGGGTCGGACGG
CACCAAGGTTTTACCGTGGCACGGGCATGGAAGGGTGGCATGGCGGGTCG
GACGGCACCAAGGTCGTGCGCACAGCCCAGTACGGGTGCAACTGCCGTGG
CGCCGGCGGAAACGGCGGTTGCGGGGAGTTCGACATCGTGGAAGCGGTAA
TCGGAGTGGATTATGCCGACATGCTCTTGACCACCGTGTATGATTTCAAG
GGCACAGGATCTCCTGGACACGACAAGTACTTCCTCAGGCCCTCGGTCGT
GCGCACAGCCCAGTACGGGTGCAACTGCCGTGGCGCCGGCGGAAACGGCG
GTTGCGGGGAGTTCGACATCGTGGAAGCGGTAATCGGAGTGGATTATGCC
GACATGCTCTTGACCACCGTGTATGATTTCAAGGGCACAGGATCTCCTGG
ACACGACAAGTACTTCCTCAGGCCCTCG
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