prot_H-elongata_contig59851.13506.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59851.13506.1
Unique Nameprot_H-elongata_contig59851.13506.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: D7FT45_ECTSI (Spermidine/spermine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT45_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.400e-36
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    3 PFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            PFGKTLVLDG  QSAQLDEFIYHE+LVHPAMLAH +PKRVYIGGGGELATAREVLRHKSVE CVMVDLD+
Sbjct:   18 PFGKTLVLDGKTQSAQLDEFIYHETLVHPAMLAHPNPKRVYIGGGGELATAREVLRHKSVEKCVMVDLDK 87          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A813BDH4_9DINO (SpeE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BDH4_9DINO)

HSP 1 Score: 118 bits (295), Expect = 1.060e-30
Identity = 56/69 (81.16%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 PFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLD 71
            PFGKTLVLDG  QSAQ DEF+YHESLVHPAMLAH   K V+IGGGGELATAREVLRH  VE CVMVD+D
Sbjct:   60 PFGKTLVLDGKTQSAQADEFVYHESLVHPAMLAHGKAKSVFIGGGGELATAREVLRHTGVEKCVMVDID 128          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7S4B7S3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B7S3_CHRCT)

HSP 1 Score: 113 bits (283), Expect = 1.270e-30
Identity = 50/72 (69.44%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 MTPFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            + PFG+ L++DG+IQS+Q DEF+YHE LVHPA+LAH +PK VYIGGGGE +TAREVLRH +VE CVMVD+D+
Sbjct:   49 LEPFGRVLMIDGLIQSSQSDEFVYHECLVHPALLAHPNPKSVYIGGGGEGSTAREVLRHSTVERCVMVDIDK 120          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: R1EEV0_EMIHU (PABS domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EEV0_EMIHU)

HSP 1 Score: 117 bits (294), Expect = 1.940e-30
Identity = 52/71 (73.24%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MTPFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLD 71
            + PFG+TL++DG+IQS Q DEF+YHE+LVHPA+LAH +P+ VYIGGGGE +TAREVLRHKSVE CVMVD+D
Sbjct:   38 LEPFGRTLMIDGLIQSTQCDEFVYHEALVHPALLAHPNPRSVYIGGGGEGSTAREVLRHKSVERCVMVDID 108          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7S1WW89_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WW89_ALECA)

HSP 1 Score: 114 bits (286), Expect = 4.780e-30
Identity = 51/72 (70.83%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 MTPFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            + PFG++LV+DG++QS + DEF+YHE LVHPAML H +PK VYIGGGGE +TAREVLRHK+VE CVMVD+DE
Sbjct:   39 LEPFGRSLVIDGLMQSCRSDEFVYHECLVHPAMLLHPNPKSVYIGGGGEGSTAREVLRHKTVERCVMVDIDE 110          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7S1CPT3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPT3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.660e-30
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    3 PFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            PFGKTLVLDG  QSA  DE++YHESLVHPAMLAH++PK V++GGGGE AT RE+LRH SVE CVMVD+D+
Sbjct:   51 PFGKTLVLDGKTQSALADEYVYHESLVHPAMLAHANPKSVFVGGGGEFATTREILRHPSVEKCVMVDIDK 120          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7S2NR58_9EUKA (Hypothetical protein n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NR58_9EUKA)

HSP 1 Score: 115 bits (289), Expect = 8.180e-30
Identity = 51/71 (71.83%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MTPFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLD 71
            + PFG+TL++DG+IQS Q+DE++YHESLVHPA+L+HS PK VYIGGGGE +TAREVLRH +VE CVMVD+D
Sbjct:   38 LAPFGRTLLIDGLIQSCQVDEYVYHESLVHPALLSHSCPKSVYIGGGGEGSTAREVLRHTTVERCVMVDID 108          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A836C836_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C836_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.110e-30
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    3 PFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            PFGKTLVLDG  QSA  DEF+YHE+LVHPAML H +PKRV+IGGGGE ATARE+LRH+SVE C+MVDLD+
Sbjct:   83 PFGKTLVLDGKSQSAAGDEFVYHEALVHPAMLLHGNPKRVFIGGGGEGATAREMLRHRSVEKCIMVDLDK 152          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7J6NY79_PEROL (PABS domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NY79_PEROL)

HSP 1 Score: 113 bits (283), Expect = 1.090e-29
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    4 FGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLDE 72
            FG+TLVLD  +QS + DE  YHE+LVHPAMLAH +PKRVYIGGGGE ATARE+L+HKSVE+CVMVDLD+
Sbjct:   44 FGRTLVLDNQVQSCETDEACYHETLVHPAMLAHPNPKRVYIGGGGEGATAREILKHKSVETCVMVDLDK 112          
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Match: A0A7S3JWK0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWK0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.360e-29
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 PFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGELATAREVLRHKSVESCVMVDLD 71
            PFGKTLVLDG  QSA  DEF+YHESLVH AML H DPKRVYIGGGGELATAREVLRH SV+  VMVDLD
Sbjct:   52 PFGKTLVLDGKTQSALGDEFVYHESLVHAAMLWHDDPKRVYIGGGGELATAREVLRHASVQEVVMVDLD 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59851.13506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT45_ECTSI3.400e-3690.00Spermidine/spermine synthase n=1 Tax=Ectocarpus si... [more]
A0A813BDH4_9DINO1.060e-3081.16SpeE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S4B7S3_CHRCT1.270e-3069.44Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
R1EEV0_EMIHU1.940e-3073.24PABS domain-containing protein n=2 Tax=Emiliania h... [more]
A0A7S1WW89_ALECA4.780e-3070.83Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S1CPT3_9STRA5.660e-3074.29Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2NR58_9EUKA8.180e-3071.83Hypothetical protein n=2 Tax=Haptolina brevifila T... [more]
A0A836C836_9STRA9.110e-3077.14S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7J6NY79_PEROL1.090e-2975.36PABS domain-containing protein n=1 Tax=Perkinsus o... [more]
A0A7S3JWK0_9STRA1.360e-2982.61Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 16..72
e-value: 6.8E-21
score: 76.8
NoneNo IPR availablePFAMPF01564Spermine_synthcoord: 21..72
e-value: 3.9E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR11558SPERMIDINE/SPERMINE SYNTHASEcoord: 3..72
NoneNo IPR availablePANTHERPTHR11558:SF32coord: 3..72
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 1..72
score: 37.255
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 3..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59851contigH-elongata_contig59851:2816..3608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59851.13506.1mRNA_H-elongata_contig59851.13506.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59851 2804..3608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59851.13506.1 ID=prot_H-elongata_contig59851.13506.1|Name=mRNA_H-elongata_contig59851.13506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MTPFGKTLVLDGMIQSAQLDEFIYHESLVHPAMLAHSDPKRVYIGGGGEL
ATAREVLRHKSVESCVMVDLDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030374PABS
IPR029063SAM-dependent_MTases