prot_H-elongata_contig59765.13493.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59765.13493.1
Unique Nameprot_H-elongata_contig59765.13493.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.320e-46
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFCC 89
            VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKT+VG+KQVFEEVVQKILDNP LLANTAPGRPR T+DP+RPN N  GGG CC
Sbjct:  121 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCC 209          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.270e-30
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFCC 89
            +VK+LVGNKVDKER+V R +AE +ARSKGMLFLEASAKTR GI+QVF EVVQKILDNP LL NTAPGRPR  ++     +  G GG+CC
Sbjct:  121 IVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPR--VNLQADAAAKGSGGYCC 207          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: M4BML9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BML9_HYAAE)

HSP 1 Score: 110 bits (274), Expect = 6.360e-29
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGT-IDPARPNSNHGGGGFCC 89
            VVKLLVGNK+DK+R+V+R +AE++ARSKGMLF+E+SAKT++GI+QVF EVVQKIL+NP LL+NTAP R RG  +D     S  GGG  CC
Sbjct:   61 VVKLLVGNKIDKDRIVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RSRGRKLDGKAEKSGGGGGSGCC 149          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 109 bits (273), Expect = 3.700e-28
Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFC 88
            VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKT++GI+QVF EVVQKIL+NP LL+NTAP R RG    A+   + GG G C
Sbjct:  116 VVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RSRGRKLDAKAEKSGGGNGCC 202          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: W2LN00_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LN00_PHYPR)

HSP 1 Score: 108 bits (269), Expect = 1.150e-27
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFC 88
            VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKT++GI+QVF EVVQKIL+NP LL+NTAP R RG     +   + GG G C
Sbjct:  106 VVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RSRGRKLDGKAEKSGGGSGCC 192          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: A0A7S2XXK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXK5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.320e-27
Identity = 54/87 (62.07%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    2 VKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFC 88
            VKLLVGNK+DKER V++ +A+ +ARS+ M+F+EASAKT+VG+K VF EVVQKILDNPVLLA+T   +PRGT++P +  + + GGG C
Sbjct:   59 VKLLVGNKIDKERQVSKQEAQSWARSRNMIFMEASAKTKVGVKTVFSEVVQKILDNPVLLASTVQ-KPRGTVNPGQSTTANQGGGCC 144          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 108 bits (269), Expect = 1.850e-27
Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRG-----TIDPARPNSNHGGGGFCC 89
            VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKT++GI+QVF EVVQKILDNP LLANTAP R R      + D   P++N GGG  CC
Sbjct:  121 VVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAP-RSRAKKVNLSADKYAPHANAGGG--CC 211          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.370e-27
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFC 88
            VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKT++GI+QVF EVVQKIL+NP LL+NTAP R RG     +   + GG G C
Sbjct:  156 VVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRGRKLDGKAEKSGGGSGCC 242          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 107 bits (268), Expect = 7.760e-27
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFC 88
            VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKT++GI+QVF EVVQKIL+NP LL+NTAP R RG     +   + GG G C
Sbjct:  173 VVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAP-RNRGRKLDGKAEKSGGGSGCC 259          
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Match: W7UBM5_9STRA (Rab family gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBM5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.020e-26
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEVVQKILDNPVLLANTAPGRPR 70
            +VK+LVGNKVDKER+V R +AE +ARSKGMLFLEASAKTR GI+QVF EVVQKILDNP LL NTAPGRPR
Sbjct:  177 IVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPR 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59765.13493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G245_ECTSI3.320e-4688.76Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A4D9D7L4_9STRA3.270e-3069.66Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
M4BML9_HYAAE6.360e-2965.56Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0NMU9_PHYIT3.700e-2867.05Rab18 family GTPase, putative n=6 Tax=Oomycota Tax... [more]
W2LN00_PHYPR1.150e-2765.91Uncharacterized protein n=14 Tax=Phytophthora para... [more]
A0A7S2XXK5_9STRA1.320e-2762.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067C8B0_SAPPC1.850e-2765.96Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A6A3N672_9STRA5.370e-2765.91Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]
A0A6G0KMK3_9STRA7.760e-2765.91Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
W7UBM5_9STRA2.020e-2681.43Rab family gtpase n=1 Tax=Nannochloropsis gaditana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..57
e-value: 0.0051
score: -72.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..65
e-value: 4.3E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR24073:SF1000coord: 2..80
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 2..80
NoneNo IPR availablePROSITEPS51419RABcoord: 1..89
score: 10.755
IPR001806Small GTPasePFAMPF00071Rascoord: 2..55
e-value: 4.4E-12
score: 45.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59765contigH-elongata_contig59765:184..885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59765.13493.1mRNA_H-elongata_contig59765.13493.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59765 184..885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59765.13493.1 ID=prot_H-elongata_contig59765.13493.1|Name=mRNA_H-elongata_contig59765.13493.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
VVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTRVGIKQVFEEV
VQKILDNPVLLANTAPGRPRGTIDPARPNSNHGGGGFCCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase