prot_H-elongata_contig59760.13492.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59760.13492.1
Unique Nameprot_H-elongata_contig59760.13492.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length223
Homology
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 2.210e-71
Identity = 125/233 (53.65%), Postives = 157/233 (67.38%), Query Frame = 0
Query:    1 LRQTQLCLDVLPPHRARLPAFCVPGSFHRGSAHDLQWLPYACCPRGVRAGTCC-------GKYRGVSWAGAGFVFPIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPAD--RRCWCIEMCRGFGQGWKNGHSIFTWADKGEW-KCRDEQEDLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIETVLVS 223
            L Q QL +D+LPP  A  PA  +PGS +   +HD Q L       G   G C        G  R +      F+FPI ++ YVGRIVW RV+PQ  P+ F    +P +  +RCWC+ +CRGF  GW+NGHSIF WADKG W   +DE+ DL+ R FRIGFEPLFVD+T++GAVYI FLL KWFA+G+ AGLVT GTVQT+ L ++YL+DI LLC LRPFSNS +QW+ETVLV+
Sbjct: 1110 LSQAQLGVDILPPRGAGFPALRLPGSVNLRGSHDQQRL----LASGGAGGVCAVLPSVRHGLVRRM--VRRKFIFPIFLMFYVGRIVWSRVKPQEGPVTFTKGLAPEEGRKRCWCVSLCRGFRDGWRNGHSIFEWADKGAWVSLKDEKVDLESRKFRIGFEPLFVDFTKEGAVYIIFLLFKWFALGIIAGLVTNGTVQTASLAVIYLVDIALLCKLRPFSNSVVQWVETVLVT 1336          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: A0A6H5JTC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC8_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 5.360e-61
Identity = 95/162 (58.64%), Postives = 122/162 (75.31%), Query Frame = 0
Query:   73 VLYVGRIVWKRVQPQTAPIVFHAVDSPAD----------RRCWCIEMCRGFGQGWKNGHSIFTWADKGEW-KCRDEQEDLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIETVLVS 223
            + YVGRIVW RV+PQ  P+ F    +PA           +RCWC+ +C+GF  GW+NGHS+F WADKG W   +DE+ DLD R FRIGFEPLFVD+T++GAVYI FL+ KWFA+ V AGLVT GTVQT+ L ++YL+D+ LLC+LRPFSNS +QW+ET+LV+
Sbjct:    1 MFYVGRIVWSRVKPQEGPVTFDKGLAPAGGDGXXXXXGRKRCWCVLLCKGFRDGWRNGHSVFEWADKGAWVSLKDEKVDLDSRKFRIGFEPLFVDFTKEGAVYIIFLIFKWFALAVIAGLVTNGTVQTASLAVIYLVDVALLCMLRPFSNSVVQWVETLLVT 162          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 3.820e-44
Identity = 76/157 (48.41%), Postives = 110/157 (70.06%), Query Frame = 0
Query:   67 VFPIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKCRDEQE-DLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIETVLV 222
            VFP++M +YV RIVW RV+P  +P+ +   +  A + C+  + C GF + W +G S+F WADKG+W  ++ ++ DLD R FRIGFEPLFVDYT+KG +Y+TFLL +W + G+ AG VT GT+QT  +  +Y++D ++L  L+PFSNS IQ   T+ V
Sbjct:  723 VFPVLMFIYVSRIVWSRVRPDNSPLRYEP-NPNAGKGCFLFKACGGFCKAWTSGSSMFEWADKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWLSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTV 878          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.000e-43
Identity = 83/198 (41.92%), Postives = 123/198 (62.12%), Query Frame = 0
Query:   26 SFHRGSAHDLQWLPYACCPRGVRAGTCCGKYRGVSWAGAGFVFPIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKCRDEQE-DLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIETVLV 222
            ++   SA + + +   C P  V  G C           A  VFP++M +YV RIVW RV+P  +P+ +   +  A + C+  + C GF + W +G S+F WA+KG+W  ++ ++ DLD R FRIGFEPLFVDYT+KG +Y+TFLL +W + G+ AG VT GT+QT  +  +Y++D ++L  L+PFSNS IQ   T+ V
Sbjct: 1017 AYQGASAAEARMIYSGCFPL-VVMGVC-----------ALIVFPVLMFIYVSRIVWSRVRPDNSPLRYEP-NPNAGKGCFLFKACGGFCKAWTSGSSMFEWAEKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWMSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTV 1201          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.360e-22
Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 0
Query:   62 AGAGFVF-PIVMVLYVGRIVWKRVQPQTAPIVF----------HAVDSPADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKCRDEQED---LDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQ 215
            AG   VF PI+M + V R  + RV+P T  IVF           A D+   +R            GW+  HS+F WA+KG W+  +   +    +G+ FRIGFEPLFVD+T+ GA ++ F L +W A+G    L+ +  +Q S+   L+ +  +LL + RPF+NS I 
Sbjct: 1072 AGLALVFYPILMFVAVLRTFFVRVRPNTL-IVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVIN 1238          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 6.580e-18
Identity = 58/172 (33.72%), Postives = 86/172 (50.00%), Query Frame = 0
Query:   62 AGAGFVF-PIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKCRDEQED---LDGRMFRIGFEPLFVDYTRKGAVYITFLL------------------CKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSN 211
            AG   VF PI+M + V R  + RV+P T PIVF             +   R    GW+  HS+F WA+KG W+  +   +    +G+ FRIGFEPLFVD+T+ GA ++ F L                   +W A+G    L+ +  +Q S+   L+ +  +LL + RPF+N
Sbjct:  213 AGLALVFYPILMFVAVLRTFFVRVRPNT-PIVF-------------LSKVRA---GWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFAN 367          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.930e-17
Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   67 VFPIVMVLYVGRIVWKRVQPQTAPIVF--HAVDSP-ADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKC---RDEQEDLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIE 218
            ++P++M + V R +  RV+P    ++F  +A D    D       +   F   W   +S+F+WADKG+W+     D Q   +G  FRIGFEP+FVDYT++G  +I   L +W A      ++    VQ  +   L+ +   +L  L+PF+NS I  IE
Sbjct: 1437 LYPLLMFVTVFRTLLVRVRPNVL-LIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIE 1593          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.880e-16
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0
Query:   67 VFPIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPADRRCWCIEMCRG-----FGQGWKNGHSIFTWADKGEWKC---RDEQEDLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQWIETVLVS 223
            ++P++M   V R ++ RV+P    ++F   D   D        CRG     F   W   +S+F+WADKG+W+     +     +G  FRIGFEP+FVDYT++G  +I   L +W ++ +   ++    VQ  +   L     ++L  L+PF+NS I  I   +V+
Sbjct: 1618 LYPLLMFATVVRTLFVRVRPDEL-LIFKTYDE--DGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVA 1779          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 9.250e-16
Identity = 56/160 (35.00%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   67 VFPIVMVLYVGRIVWKRVQPQTAPIVF--------HAVDSPADRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKC---RDEQEDLDGRMFRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQ 215
            V+P++M++   R    RV P T  IVF        H  D    R             G K  HS+F WA+ G W+     DE+   +G  FRIGFEPLFVD+T+K + +  + L +   +  TA LV    VQ  +   L+ +  +LL I RPF+NS I 
Sbjct:  304 VYPVLMIILSYRTHRVRVAPDTL-IVFKPVGEEENHGTDGTVPR-----SFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIIN 457          
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-14
Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 0
Query:   67 VFPIVMVLYVGRIVWKRVQPQTAP-IVFHAVDSPADRRCWCIEMCRGF----GQGWKNGHSIFTWADKGEWKCRDEQEDLDGRM---FRIGFEPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDIILLCILRPFSNSFIQ 215
            V+P++++  + R+V+ RV P TA  + F      +         CRGF     +G +  HS F WA KG W+  + ++  + R+   FRIGFEPLFVDYT+ G+ +  + L +   +     L+    VQ  I   L ++  +L+  L PF+N  ++
Sbjct:  730 VYPVLVLWVMVRVVFARVFPPTATGLAFAVTQKDSYYTTNGQRGCRGFFWRVRKGLEEDHSAFAWAKKGAWRTVENEDAKEQRLRNWFRIGFEPLFVDYTKAGSWFALYALMEAAVIACVGVLIDSSQVQLLIFLGLNVVQFVLVAHLTPFANRVVE 886          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59760.13492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LIK9_ECTSI2.210e-7153.65Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A6H5JTC8_9PHAE5.360e-6158.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3P1_ECTSI3.820e-4448.41Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5LAH5_9PHAE1.000e-4341.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN93_ECTSI1.360e-2236.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV63_9PHAE6.580e-1833.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS4_ECTSI3.930e-1733.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLG6_ECTSI1.880e-1631.52Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1L9_ECTSI9.250e-1635.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCW7_9PHAE1.200e-1431.21VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..77
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 190..209
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59760contigH-elongata_contig59760:1058..3488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59760.13492.1mRNA_H-elongata_contig59760.13492.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59760 1058..3488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59760.13492.1 ID=prot_H-elongata_contig59760.13492.1|Name=mRNA_H-elongata_contig59760.13492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
LRQTQLCLDVLPPHRARLPAFCVPGSFHRGSAHDLQWLPYACCPRGVRAG
TCCGKYRGVSWAGAGFVFPIVMVLYVGRIVWKRVQPQTAPIVFHAVDSPA
DRRCWCIEMCRGFGQGWKNGHSIFTWADKGEWKCRDEQEDLDGRMFRIGF
EPLFVDYTRKGAVYITFLLCKWFAVGVTAGLVTKGTVQTSILFMLYLIDI
ILLCILRPFSNSFIQWIETVLVS
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