mRNA_H-elongata_contig11726.1349.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11726.1349.1
Unique NamemRNA_H-elongata_contig11726.1349.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 6.350e-52
Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct:  812 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1147          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 6.770e-52
Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1191 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1526          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 6.830e-52
Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1211 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1546          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 6.890e-52
Identity = 121/344 (35.17%), Postives = 191/344 (55.52%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1354 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1689          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 8.390e-49
Identity = 118/343 (34.40%), Postives = 192/343 (55.98%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR-QGCGLCMQVNT------DSNSGAVLMLSKGA--ISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  +      SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+ +A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      ++  ++P R+AVG++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R  G GL + V+       D  S + L  + G   +S  S+ + + +  ++EAEY+A  E V
Sbjct:  403 QITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------DKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTEDRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGV 738          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.550e-48
Identity = 107/296 (36.15%), Postives = 172/296 (58.11%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN 888
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA+  A +D E+ +++P        E+ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K  ++ ++     I R+     L+I Q  Y++SMV++ DV+  S+IP + GV    K D+      E+  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++
Sbjct:  366 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDD------EKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDAS 653          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 8.570e-48
Identity = 120/338 (35.50%), Postives = 186/338 (55.03%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR-QGCGLCMQVNT------DSNSGAVLMLSKGA--ISWYSRMQEVTASGASEAEYVA 987
            Q+  V Y    SP PS+ASI ++LA A  K   L H++ +QA   A +D E+   +P        ++ +  +AIYGL Q+GR W     + ++   FEQ KA+ CVFRK+VD  V +++V++VDDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++   RAVAR    P + H  ++ KI+ YL  T++  ITY R  G G  + V+       DS SG+ L  + G   +S  S+ Q + +  ++EAEY+A
Sbjct:  921 QLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGPSVYVDASYADTEDSRSGSGLATTVGGTLVSHGSKTQGIVSLSSTEAEYIA 1251          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.820e-47
Identity = 117/345 (33.91%), Postives = 190/345 (55.07%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMR-KFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGR---QGCGLCMQVNTD---------SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSE 996
            Q E + + + Y+PT +++S+RML A A   D EL HF+  QAF++A ++  + + +PE      G++ +LNK++YGL QA R W     + +L + FEQ  A+ C+FR V  GEV +++VVHVDDI A    K   D+F   L +   +K   ++++    +   +  A  + I Q  Y E + E+  V+ G  IP    +PT  K    W+ + +E   + P+R  VG+L+W A + +PDIA+ VRAVAR+   P   H K+ +  + Y + T ++ I++ R    G  L   V  D         S SG V+M + GAI+W+S+ Q+      ++AEYVA+++
Sbjct:  181 QKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFA-VGTKERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIP----LPTTWKL---WDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMAD 517          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D)

HSP 1 Score: 172 bits (435), Expect = 1.520e-45
Identity = 117/347 (33.72%), Postives = 177/347 (51.01%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*--HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEK--LDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYG-------RQGCGLCMQVNTD---SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEA 999
            QV+GV Y E +SP     S+R++LA AA  D E+   + + AFL   +  EL +  PE     K   +V +L ++IYGLVQA R W+  F E I    F Q   E CV++KV  G     ++++VDDIL    D   +D   A L + F +K+  +  Y +   I R+ + R + + Q  Y++ +++K  +D  K   +P   GV   S        +KEEM   PY  A+G++M+     +PD+   V  V R+  NPG+ H  +V  I++YL  TK+ ++ YG       +         + D   S +G V +L+ GA+SW S  Q V A    EAEY+A SEA
Sbjct:   90 QVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFKMDQSKKGFLPVLQGVRLSSAQCPTTAKDKEEMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNILKYLKRTKDMFLVYGGDEELVVKGYVDASFDTDLDDSKSQTGYVYILNGGAVSWCSCKQSVVAGSTCEAEYMAASEA 435          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.250e-44
Identity = 113/344 (32.85%), Postives = 184/344 (53.49%), Query Frame = 1
Query:    1 QVEGVHYTEKYSPTPSTASIRMLLATAATKDGELRHFNAQQAFLKADIDGELNIEIPEE*HKFPGEVGRLNKAIYGLVQAGRCWSNTFCENILVIRFEQVKAEICVFRKVVDGEVEVVVVVHVDDILAHAKDKATMDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 1002
            Q+  V Y    SP PS+ASI+++LA A  K   L H++ +QA   A +D E+ +++P        ++ +   AIYGL Q+ R W     + ++   FE+ KA+ CVFRK+VD  V +++V++ DDIL    D+   +   A L +KF  K   + ++     I R+  A  L+I Q  Y++SM+++ DV+  S+IP T G      AD     E EE  ++P R+A+G++MW +T  +PD++  VRA AR   +P   H  ++  ++ YL  T++  ITY R G GL + V  D++          SG    +    +   S+ Q + +  ++EAEY+A  E V
Sbjct:  698 QIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPG------ADLGPIREDEEGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVGHGSKTQSIVSLSSTEAEYIAAGEGV 1033          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE6.350e-5235.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.770e-5235.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE6.830e-5235.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE6.890e-5235.17Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE8.390e-4934.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE1.550e-4836.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE8.570e-4835.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K307_9PHAE4.820e-4733.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI002025A47D1.520e-4533.72hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
A0A6H5JJY0_9PHAE1.250e-4432.85CCHC-type domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11726contigH-elongata_contig11726:7760..8761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score108.6
Seed ortholog evalue3.4e-21
Seed eggNOG ortholog221103.XP_007845407.1
EggNOG free text desc.Integrase core domain
EggNOG OGs22D21@155619,39QKZ@33154,3Q6Q9@4751,3V7VH@5204,3WA55@5338,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1002
Cds size597
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929683.025921-CDS-H-elongata_contig11726:7759..83561622929683.025921-CDS-H-elongata_contig11726:7759..8356Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11726 7760..8356 -
1691679117.9099276-CDS-H-elongata_contig11726:7759..83561691679117.9099276-CDS-H-elongata_contig11726:7759..8356Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11726 7760..8356 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929683.049674-UTR-H-elongata_contig11726:8356..87611622929683.049674-UTR-H-elongata_contig11726:8356..8761Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11726 8357..8761 -
1691679117.9287105-UTR-H-elongata_contig11726:8356..87611691679117.9287105-UTR-H-elongata_contig11726:8356..8761Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11726 8357..8761 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11726.1349.1prot_H-elongata_contig11726.1349.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11726 7760..8356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11726.1349.1

>prot_H-elongata_contig11726.1349.1 ID=prot_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVE
KLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTAT
MRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGC
GLCMQVNTDSNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV
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mRNA from alignment at H-elongata_contig11726:7760..8761-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11726.1349.1 ID=mRNA_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-elongata_contig11726:7760..8761- (Himanthalia elongata Himel1 dioecious)
CAGGTGGAAGGTGTACACTATACGGAAAAATACTCGCCCACGCCATCGAC CGCGTCAATCCGGATGCTTTTGGCCACAGCAGCGACCAAGGACGGTGAGC TGCGCCATTTCAACGCGCAGCAGGCATTCTTGAAAGCGGACATCGATGGG GAGTTAAATATAGAGATCCCCGAGGAGTAACACAAGTTTCCGGGGGAAGT GGGACGGCTAAACAAGGCCATTTACGGACTCGTACAGGCGGGGAGATGCT GGAGCAACACGTTCTGCGAGAATATATTGGTGATTAGATTCGAGCAGGTA AAAGCGGAAATATGCGTGTTCCGTAAGGTTGTTGACGGCGAGGTGGAAGT AGTGGTGGTCGTACACGTGGACGATATTCTTGCTCACGCCAAAGACAAAG CGACTATGGATAGATTCGCGGCTAAGCTTGAACAAAAGTTCAAATTGAAG GAAAGGGATGACGTCAGATACTGCATGAGCTACCACATTACTAGGAACCA CAACGCACGCGAGCTGAAGATCGACCAACACTTGTACGTGGAGTCGATGG TGGAAAAGCTCGACGTCAAGAAGGGAAGCAAGATACCGACTACGTCGGGG GTGCCAACATTCTCAAAGGCGGACGAGCCGTGGAACCCGGAGAAGGAGGA AATGAGGAAGTTCCCATACCGGCAAGCAGTGGGGGCGCTTATGTGGACGG CGACGATGAGACAGCCGGACATTGCGAGCAAAGTACGCGCTGTGGCCAGG TTCTGCAAAAACCCTGGGCGGGCGCATAAGAAGTCAGTGATGAAGATCAT GCAGTATCTCCTTCACACGAAGAATTGGTGGATTACATACGGTAGACAGG GTTGTGGACTCTGCATGCAGGTAAACACGGACTCAAATTCCGGAGCGGTG TTGATGTTGTCGAAGGGGGCGATCAGCTGGTACTCAAGGATGCAAGAAGT GACAGCATCGGGTGCCTCGGAGGCAGAGTACGTTGCTTTATCAGAGGCGG TA
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Coding sequence (CDS) from alignment at H-elongata_contig11726:7760..8761-

>mRNA_H-elongata_contig11726.1349.1 ID=mRNA_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig11726:7760..8761- (Himanthalia elongata Himel1 dioecious)
ATGGATAGATTCGCGGCTAAGCTTGAACAAAAGTTCAAATTGAAGGAAAG
GGATGACGTCAGATACTGCATGAGCTACCACATTACTAGGAACCACAACG
CACGCGAGCTGAAGATCGACCAACACTTGTACGTGGAGTCGATGGTGGAA
AAGCTCGACGTCAAGAAGGGAAGCAAGATACCGACTACGTCGGGGGTGCC
AACATTCTCAAAGGCGGACGAGCCGTGGAACCCGGAGAAGGAGGAAATGA
GGAAGTTCCCATACCGGCAAGCAGTGGGGGCGCTTATGTGGACGGCGACG
ATGAGACAGCCGGACATTGCGAGCAAAGTACGCGCTGTGGCCAGGTTCTG
CAAAAACCCTGGGCGGGCGCATAAGAAGTCAGTGATGAAGATCATGCAGT
ATCTCCTTCACACGAAGAATTGGTGGATTACATACGGTAGACAGGGTTGT
GGACTCTGCATGCAGGTAAACACGGACTCAAATTCCGGAGCGGTGTTGAT
GTTGTCGAAGGGGGCGATCAGCTGGTACTCAAGGATGCAAGAAGTGACAG
CATCGGGTGCCTCGGAGGCAGAGTACGTTGCTTTATCAGAGGCGGTAATG
GATAGATTCGCGGCTAAGCTTGAACAAAAGTTCAAATTGAAGGAAAGGGA
TGACGTCAGATACTGCATGAGCTACCACATTACTAGGAACCACAACGCAC
GCGAGCTGAAGATCGACCAACACTTGTACGTGGAGTCGATGGTGGAAAAG
CTCGACGTCAAGAAGGGAAGCAAGATACCGACTACGTCGGGGGTGCCAAC
ATTCTCAAAGGCGGACGAGCCGTGGAACCCGGAGAAGGAGGAAATGAGGA
AGTTCCCATACCGGCAAGCAGTGGGGGCGCTTATGTGGACGGCGACGATG
AGACAGCCGGACATTGCGAGCAAAGTACGCGCTGTGGCCAGGTTCTGCAA
AAACCCTGGGCGGGCGCATAAGAAGTCAGTGATGAAGATCATGCAGTATC
TCCTTCACACGAAGAATTGGTGGATTACATACGGTAGACAGGGTTGTGGA
CTCTGCATGCAGGTAAACACGGACTCAAATTCCGGAGCGGTGTTGATGTT
GTCGAAGGGGGCGATCAGCTGGTACTCAAGGATGCAAGAAGTGACAGCAT
CGGGTGCCTCGGAGGCAGAGTACGTTGCTTTATCAGAGGCGGTA
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