prot_H-elongata_contig59581.13470.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 2.330e-9 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
+D L IGF PLKSD C+Y+Y+ + V LTLYVDD+L + +S +KK+L +FN++D+
Sbjct: 213 IDPLLVEIGFVPLKSDTCIYLYDHDDVQVYLTLYVDDLLLAGDNSNAISTIKKKLKQRFNMTDM 276
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 1.130e-8 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
+D L IGF PLKSD CVY+Y+ + V LTLYVDD+L + +S +KK+L +F ++D+
Sbjct: 733 IDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSNAISMIKKKLKQRFKMTDM 796
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 1.540e-8 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
+D L IGF PLKSD CVY+Y+ + V LTLYVDD+L + +S +KK+L +F ++D+
Sbjct: 622 IDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDM 685
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6H5K9C7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C7_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 3.050e-8 Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
+D L V G++ +SDPCVY Y VILT+YVDDIL + L+ + KK L DQF ++D+
Sbjct: 72 LDDSLTVPGWKRTQSDPCVYGYTSGDIIVILTVYVDDILITGGDQQLVDQKKKDLTDQFEMTDM 135
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.020e-7 Identity = 23/57 (40.35%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 8 IGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
+GF L DPCV+++ GF I++LYVDD+L ++ + +L+S +K L D+F++ D+
Sbjct: 1351 LGFTRLHKDPCVFLHTSSNGFTIVSLYVDDLLIIAPTTSLVSSMKLSLSDRFHMKDL 1407
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A438DLB2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DLB2_VITVI) HSP 1 Score: 52.8 bits (125), Expect = 4.630e-7 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query: 8 IGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDIWAT 67
IGF+ ++D C YI + ++IL LYVDD+L +S ++ LKKQL QF + D+ AT
Sbjct: 4 IGFKRCEADHCCYIKSFDNSYIILLLYVDDMLIAGSSIEKINNLKKQLSKQFAMKDLGAT 63
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A2I0JT04_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JT04_PUNGR) HSP 1 Score: 53.5 bits (127), Expect = 1.160e-6 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 9 GFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
GF+ + D CVYI E E G++IL LYVDDIL + + +++ K L +FN+ D+
Sbjct: 118 GFKINECDKCVYIKETENGYIILCLYVDDILIVGSDDSMIKSTKNMLNSRFNMKDM 173
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6G0WNM5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNM5_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.250e-6 Identity = 22/56 (39.29%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 9 GFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISDI 64
GF L D CV+++ + GF I++LYVDD+L ++ + +L+S +K L D+F + D+
Sbjct: 162 GFTRLHKDRCVFLHTSDDGFTIVSLYVDDLLIIAPTTSLVSSMKLSLFDRFQMKDL 217
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 53.1 bits (126), Expect = 2.300e-6 Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFL 41
+D L IGF PLKSD CVYIY+ V+LTLYVDD+L +
Sbjct: 465 IDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLII 505
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Match: A0A1K0G6K2_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ustilago bromivora TaxID=307758 RepID=A0A1K0G6K2_9BASI) HSP 1 Score: 52.4 bits (124), Expect = 2.490e-6 Identity = 22/63 (34.92%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 1 MDVELAVIGFRPLKSDPCVYIYEDETGFVILTLYVDDILFLSASKTLLSKLKKQLMDQFNISD 63
+D +L GF+ +++PCVY+ + VIL +YVDD+L + + +L+ +++QL F+I+D
Sbjct: 52 LDKQLRAFGFKQCRAEPCVYVRGIKDAMVILAIYVDDLLVIGVTLSLVKPVRQQLSSVFSITD 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59581.13470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig59581.13470.1 ID=prot_H-elongata_contig59581.13470.1|Name=mRNA_H-elongata_contig59581.13470.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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