prot_H-elongata_contig5955.13467.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5955.13467.1
Unique Nameprot_H-elongata_contig5955.13467.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig5955.13467.1 vs. uniprot
Match: D7FX62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX62_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.330e-34
Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    1 LAQAAFKFYDKLKNYDEFDYGYTLKMFPDDPVTPIEKRAPNTNPVSRFFEGLLSPVNTAGMKGPPVDPPP 70
            L +AAF+ YDKL  YDEF+YGYTLKMFPDDPVTPIEKRAP+TNPV +FFEGLLSPVNTAGMKGP ++PPP
Sbjct:  126 LKKAAFRVYDKLAAYDEFEYGYTLKMFPDDPVTPIEKRAPSTNPVGKFFEGLLSPVNTAGMKGPEINPPP 195          
BLAST of mRNA_H-elongata_contig5955.13467.1 vs. uniprot
Match: A0A7S1Y6R6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6R6_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.320e-6
Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 LAQAAFKFYDKLKNYD-EFDYGYTLKMFPDDPVTPIEK---RAPNTNPVSRFFEGLLSPVNTAGMKGPPVD 67
            L +A  + Y KL+ ++ EF++G+ LK++PDDP+    K   RAP  +    +   LLSPV+ +G+K PPV+
Sbjct:  116 LKKAIVRTYPKLEGFEQEFEFGFNLKVYPDDPIETATKGGARAPGLS-FGNWISTLLSPVDNSGVKPPPVE 185          
BLAST of mRNA_H-elongata_contig5955.13467.1 vs. uniprot
Match: A0A6V0XB29_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0XB29_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.690e-6
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 LAQAAFKFYDKLKNYD-EFDYGYTLKMFPDDPVTPIEKRAPNTN--PVSRFFEGLLSPVNTAGMKGPPVD 67
            L  A  + Y KLK  + EF+YGY LK++PDDPV    K   N++   V  +   LLSPV+ +G+  P V+
Sbjct:  117 LRSAIVRAYPKLKGSEMEFEYGYNLKIYPDDPVQVASKSMGNSSGPSVGNWISNLLSPVDASGVAQPVVE 186          
BLAST of mRNA_H-elongata_contig5955.13467.1 vs. uniprot
Match: A0A7S2YFB7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFB7_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.320e-5
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
Query:    1 LAQAAFKFYDKLKNYD-EFDYGYTLKMFPDDPVTPIEKRAPNTN--PVSRFFEGLLSPVNTAGMKGPPV 66
            +A    + Y KLK Y+ EF+YGY LK++PDDP+    K +  +    V  +   LLSPV+ + +  PP 
Sbjct:  113 MASGIVRTYPKLKGYEQEFEYGYNLKIYPDDPIEVASKTSSLSTGFSVGNWISTLLSPVDASNVPPPPT 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5955.13467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX62_ECTSI1.330e-3481.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1Y6R6_9STRA1.320e-639.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6V0XB29_9STRA2.690e-641.43Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2YFB7_9STRA1.320e-537.68Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5955contigH-elongata_contig5955:10316..11077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5955.13467.1mRNA_H-elongata_contig5955.13467.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5955 10316..11077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5955.13467.1 ID=prot_H-elongata_contig5955.13467.1|Name=mRNA_H-elongata_contig5955.13467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
LAQAAFKFYDKLKNYDEFDYGYTLKMFPDDPVTPIEKRAPNTNPVSRFFE
GLLSPVNTAGMKGPPVDPPPS*
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