mRNA_H-elongata_contig59491.13463.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A6H5L6L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L0_9PHAE) HSP 1 Score: 286 bits (732), Expect = 4.010e-93 Identity = 138/208 (66.35%), Postives = 164/208 (78.85%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALML---APFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPLLFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTGSSSPLGL+FDHGCDAINCCFGVVFV CIL+AGS+L LL A++L PFFFTTWEHYYT+E+ILPI+NGPSEGV++G V A LRG YG +FF+ PR+ L+GWPLGE LMA SL GV +TV KQ V VARARR +GM +P+ D F L+++ +WA RP LF PYT VLLF LLH+DM+VH+MVCHIC + CR FR
Sbjct: 109 QARRTGSSSPLGLIFDHGCDAINCCFGVVFVSCILDAGSNLPLLAAIVLNQLVPFFFTTWEHYYTHELILPIVNGPSEGVVLGAVSACLRGVYGPDFFSAPREGLRGWPLGEVLMACSLLGVVLTVCKQIVLVARARRLAGRGMVNPIRDASWFVVLMVVGGLWASVRPELFLAKPYTTVLLFCLLHVDMAVHLMVCHICNMVCRSFR 316
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: D7FNI0_ECTSI (Aminoalcohol phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI0_ECTSI) HSP 1 Score: 254 bits (648), Expect = 2.790e-81 Identity = 128/208 (61.54%), Postives = 147/208 (70.67%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALML---APFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPLLFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTGSSSPLGL+FDHGCDAINCCFGVVFV CIL+AGSSL LL A++L PFFFTTWEHYYT+E+ILPI+NGPSEGV++G V A LRG YG EFF+ PR+ L+GWPLGE LMA SL GV +TV KQ +WA RP LF PYTMVLLFGLLH+DM+VH+MVCH+C + CR FR
Sbjct: 109 QARRTGSSSPLGLIFDHGCDAINCCFGVVFVSCILDAGSSLPLLAAIVLNQLVPFFFTTWEHYYTHELILPIVNGPSEGVVLGAVSACLRGVYGPEFFSAPREGLRGWPLGEVLMACSLLGVALTVFKQ---------------------------------IWASVRPELFLTKPYTMVLLFGLLHVDMAVHLMVCHVCNMVCRSFR 283
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A1W0A5A4_9STRA (CDP-alcohol phosphatidyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5A4_9STRA) HSP 1 Score: 139 bits (349), Expect = 7.640e-36 Identity = 84/209 (40.19%), Postives = 113/209 (54.07%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGS---SLCLLGALMLAPFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPLLFEGM-PYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTG+SSPLGLLFDHGCDAINC G + + CI+ G+ SLCL G + A F TWE YYT + LPI+NGP+EGV+I + V LL G F+ G + I + TV F+ V +A R Q + + F+ L LA+VWA P + + P + GLL + +H+M+ H+CG + PFR
Sbjct: 113 QARRTGTSSPLGLLFDHGCDAINCTIGSMTMSCIVQFGAGWKSLCL-GLWVNAVFIAATWEEYYTGSLDLPILNGPTEGVLIAIFVKLLTAFMGPSFWLQ-ESVFPGVLNNTVFLGIMVVSSAFTVFANFINVVKAVREQKGSFLVAITRITPFAILDGLALVWAILSPANIKHIHPRMFLWTIGLLTSKLVLHLMLAHLCGEEYHPFR 319
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A835Z7G9_9STRA (CDP-alcohol phosphatidyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G9_9STRA) HSP 1 Score: 137 bits (345), Expect = 6.290e-35 Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1
Query: 4 ARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLG---ALMLAPFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTV-ARARRRQHKGMASP----MFDVVGFSTLLILAVVWARSRPLLFEGMPYTMVLLFGLLHIDM 561
ARRTGS SPLGLLFDHGCDAINC G + G SL L+ A PFF+ TWE Y+ EM LPIINGPSEG++IGV + + G +F+ TP L G+ ++A S+ G+ T + Q TV A ++ G A+ ++ + GF+ L+ W P F+ P+ +V L G +++D+
Sbjct: 114 ARRTGSGSPLGLLFDHGCDAINCTLGTFVFATAIGVGRSLPLVAMCFANQAVPFFWATWEEYHIGEMNLPIINGPSEGMLIGVALTVGNYFTGPDFWWTPLDALFGYAPAAAILAASMIGIATTALIQTATVLAHVAKKSDGGGAAAAARALWGLSGFAASAALSAAWLSRAPAAFDAHPHAVVFLVGAVNVDL 307
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A5D6Y1T1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1T1_9STRA) HSP 1 Score: 137 bits (344), Expect = 9.610e-35 Identity = 76/208 (36.54%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALMLAPFFF--TTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPL-LFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTGSSSPLGLLFDHGCDA+N G + + C+L G++ L A F TWE YY+ + LP+INGP+EG++IG+ + L A G +F+T L G + + ++ +T+ V V A R + M + + F + +L V+WA P +F P + + GLL+ + +H+M+ H+CG + PFR
Sbjct: 159 QARRTGSSSPLGLLFDHGCDALNVSVGTMTMACVLQLGATWKTLAFAWSAHVVFICATWEEYYSGSLQLPLINGPTEGILIGISLKLFTAAIGTQFWTQDAL-LPGVQMNTLFVMVTAISASLTIAVNVVNVYHAVRVRKDSMVVAVTRLAPFVLVNVLLVLWATFSPSGIFTQYPRLFLWMLGLLNSKLVLHLMLAHLCGEEYHPFR 365
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: K3WTS5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS5_GLOUD) HSP 1 Score: 133 bits (334), Expect = 1.840e-33 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALMLAPFFF--TTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPL-LFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTGSSSPLGLLFDHGCDA+N G + + C++ G++ L M A F TWE YY+ + LP+INGP+EG++IG + L G +F+T ++ + G+ + ++ F T+ V V A R + + + + F L LA +W P +F P + + GLL+ + +H+M+ H+CG + PFR
Sbjct: 147 QARRTGSSSPLGLLFDHGCDALNVSVGTMTMACVMQMGTTWKTLAFSMSAHVVFICATWEEYYSGSLQLPLINGPTEGILIGCALKLFTAWVGSQFWT--QEIIPGFQNNSVFVIVTAISSFFTIAVNGVNVLHAVRLANDSILVALTRLTPFFILNSLAALWVVFSPSDIFSQYPRMFLWMIGLLNSKLVLHLMLAHLCGEEYHPFR 352
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A067C6R2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C6R2_SAPPC) HSP 1 Score: 132 bits (331), Expect = 3.340e-33 Identity = 74/208 (35.58%), Postives = 108/208 (51.92%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILN--AGSSLCLLGALMLAPFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPLLFEGM-PYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTG+SSPLGLLFDHGCDAINC G + + C++ AG LG + F TWE YYT + LPI+NGP+EGV+I + + L G F+ L G + + + TV+ + V + Q + + F+ L LA++WA P + + P + GLL+ + +H+M+ H+CG + PFR
Sbjct: 115 QARRTGTSSPLGLLFDHGCDAINCTIGSMTMSCVVQFGAGWKATCLGLWVNMVFIAATWEEYYTGSLDLPILNGPTEGVLIAIGIKLFTAIMGPSFWLQESTILPGVLHNTIFLGVMIASSTFTVLANLINVIKTVHAQKGSFLIALTRLTPFAILNGLALLWAILSPANIKAIHPRMFLWTIGLLNSKLVLHLMLAHLCGEEYHPFR 322
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A2P4X5T8_9STRA (CDP-alcohol phosphatidyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5T8_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.450e-33 Identity = 79/214 (36.92%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALMLAPF--FFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLL------ILAVVWARSRPL-LFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRT +SSPLGLLFDHGCDA+N G + + IL G++ LG ++ F F TWE YY+ + LPIINGP+EG++IG+V+ L A G +F+ + ++G + SLF + V F + R H + +V F+ LL LA +WA P +F P + + GLL+ + +H+M+ H+CG + PFR
Sbjct: 32 QARRTNTSSPLGLLFDHGCDALNVSVGTMTMASILQMGTTWRTLGFVLSGHFVFIFATWEEYYSGSLELPIINGPTEGILIGIVLKLFTAAAGVDFWN--EELIEG------VQNNSLFVIVTMVSSCFTLMVNVRNALHAVRLNQDSVLVAFTRLLPFVIINTLAGLWAMYSPSDIFSTHPRMFLWMLGLLNSKLVLHLMLAHLCGEEYHPFR 237
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: A0A8K1FIL2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIL2_PYTOL) HSP 1 Score: 128 bits (321), Expect = 1.290e-31 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALMLAP--FFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFFTTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPL-LFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTGSSSPLGLLFDHGCDA+N G + + ++ G++ L ++ A F TWE YY+ + LPIINGP+EG++IGV + L+ + G F+ + + G+ + + F TV+ V V A R + + + + F L +A WA P +F P + + GLL+ + +H+M+ H+CG + PFR
Sbjct: 141 QARRTGSSSPLGLLFDHGCDALNVSVGTMTMASVIQLGTTWKTLVFVLSAHTVFICATWEEYYSGLLSLPIINGPTEGILIGVFLKLVTASIGPSFWL--EEYIPGYQNNTVFVLATAFASVPTVLTNAVNVYHAVRLRSDSLIVALTRLTPFFILNSMAAAWALLSPSDIFSTYPRLFLWMLGLLNSKLVLHLMLAHLCGEEYHPFR 346
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Match: W4GV92_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV92_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.090e-31 Identity = 82/210 (39.05%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 1 QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCI--LNAGSSLCLLGALMLAPFFFTTWEHYYTNEMILPIINGPSEGVIIGVVVALLRGAYGHEFF--TTPRKELQGWPLGEFLMAISLFGVFVTVVKQFVTVARARRRQHKGMASPMFDVVGFSTLLILAVVWARSRPL-LFEGMPYTMVLLFGLLHIDMSVHVMVCHICGVKCRPFR 615
QARRTG+SSPLGLLFDHGCDAINC G + + + AG L+ + F TWE YYT + LPIINGP+EGV+I VV+ L A G F+ T +Q L F M L +TV+ V V++ R+Q +A M ++ F+ LA++WA P + P + GLL+ + +H+M+ H+C + PFR
Sbjct: 120 QARRTGTSSPLGLLFDHGCDAINCSIGSMTMAAVAQFGAGWKSVLMVLWINFAFIGATWEEYYTGTLELPIINGPTEGVLIAVVLKLATAALGTRFWHHDTFVSGVQNNTLFLFTM---LATSSITVLGNVVNVSQTVRKQRISVAVAMTRLIPFALFNGLAIIWALYSPSDILRHHPRLFLWTAGLLNSKLLLHLMLAHLCEEEFHPFR 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59491.13463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59491.13463.1 >prot_H-elongata_contig59491.13463.1 ID=prot_H-elongata_contig59491.13463.1|Name=mRNA_H-elongata_contig59491.13463.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp QARRTGSSSPLGLLFDHGCDAINCCFGVVFVGCILNAGSSLCLLGALMLAback to top mRNA from alignment at H-elongata_contig59491:59..3057- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59491.13463.1 ID=mRNA_H-elongata_contig59491.13463.1|Name=mRNA_H-elongata_contig59491.13463.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2999bp|location=Sequence derived from alignment at H-elongata_contig59491:59..3057- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59491:59..3057- >mRNA_H-elongata_contig59491.13463.1 ID=mRNA_H-elongata_contig59491.13463.1|Name=mRNA_H-elongata_contig59491.13463.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig59491:59..3057- (Himanthalia elongata Himel1 dioecious)back to top |