prot_H-elongata_contig59466.13460.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig59466.13460.1
Unique Name	prot_H-elongata_contig59466.13460.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	92

Homology

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 8.230e-19
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAI 88
            QDV TRW S+  M+ERLL L + IK  +  D + P+L+  DW VL +   +L+PFMQ QK LE   YVTGS+ VP I +LR  LE AI
Sbjct:  229 QDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAI 316

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.230e-16
Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAI 88
            QDV TRW ST  MV RLL L + IK  +  D+V PLL+  DW VL +   +L+PFM+ QK LE   YVTGS+ +  + +LR  LE AI
Sbjct:  193 QDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAI 280

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI000B93611E (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B93611E)

HSP 1 Score: 62.4 bits (150), Expect = 2.450e-9
Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEP-LLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAIP 89
            QDV TRW+S   MVERL+E++ PI     + +  P  LTA +W ++     +L+PF      L    Y T SLV+P I DL+ +++   P
Sbjct:  275 QDVSTRWNSCLIMVERLIEIKNPISAAMSSLRRAPNCLTATEWDLIADCAPILKPFEHMTSELSGEKYPTLSLVIPLIRDLQYTVKNIKP 364

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI000B939B7C (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B939B7C)

HSP 1 Score: 62.0 bits (149), Expect = 3.160e-9
Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIK----TPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAIP 89
            QDV TRW+ST  M+ERLL+L+EPI     T  EA    P L++ +W V+E  + +L+PF      L    Y T S V+P I  L+ +L    P
Sbjct:   86 QDVCTRWNSTLVMMERLLQLKEPITIVIMTLKEAP---PNLSSDEWDVVEDCIPLLKPFHSITVELSAEEYPTISKVIPLIRGLQIALTNKDP 175

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI000873C321 (zinc finger BED domain-containing protein 1-like n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000873C321)

HSP 1 Score: 61.2 bits (147), Expect = 5.960e-9
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEA-DKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVV 74
            QDVVTRW+ST  MV+R +EL EPI+T     +K  P+++  +W  L+  + +L+P     K +   NYVT S+ +
Sbjct:  168 QDVVTRWNSTYYMVDRFVELEEPIRTTMALLNKDFPVISLEEWNFLKELIHILEPLENVTKLMSAENYVTASMTI 242

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI000B939146 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B939146)

HSP 1 Score: 61.2 bits (147), Expect = 6.360e-9
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIK-TPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLR 81
            QDVVTRW+S+  M+ERLL+++ P+  T     +    L A +W +L   + +L+PF      L   NY+T S ++P I  L+
Sbjct:  308 QDVVTRWNSSLIMIERLLDIKNPLSATMSSLPRAPNCLNACEWEILLDCIHILKPFEIMTAELSGENYITISSIIPLIRGLQ 389

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: J9LSU7_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LSU7_ACYPI)

HSP 1 Score: 60.8 bits (146), Expect = 8.650e-9
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIK-TPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLR 81
            QDVVTRW+S+  M+ERL++++ P+  T     +    L A +W ++  ++ +L+PF      L   NYVT S ++P I  L+
Sbjct:  258 QDVVTRWNSSLIMIERLIDIKNPLSATMSSLPRAPNYLNACEWEIILDSIHILKPFEIMTAELLGENYVTSSSIIPLIRGLQ 339

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI000DC1421C (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC1421C)

HSP 1 Score: 60.1 bits (144), Expect = 1.600e-8
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIK-TPDEADKVEPLLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLE 85
            QDVVTRW+S+  M+ERL++++ P+  T     +    L A +W ++   + +L+PF      L   NYVT S ++P I  L+  L+
Sbjct:  241 QDVVTRWNSSLIMIERLIDIKNPLSATMSSLPQAPNYLNACEWEIILDCIHILKPFEIMTAELSGENYVTISSIIPLIRGLQHILK 326

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: UPI001113BC33 (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113BC33)

HSP 1 Score: 59.7 bits (143), Expect = 2.230e-8
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEP-LLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAIP 89
            QDV TRW+S   M+ERL+E++ PI     + +  P  LTA +W ++     +L+PF      L    Y T SLV+P I  L+ +++   P
Sbjct:  384 QDVSTRWNSCLIMIERLIEIKNPISAAMSSLRRAPNFLTATEWDLIADCAPILKPFEHMTSELSGEKYPTLSLVIPLIRGLQYTVKNIKP 473

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BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Match: J9LS52_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LS52_ACYPI)

HSP 1 Score: 59.7 bits (143), Expect = 2.270e-8
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 0

Query:    1 QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEP-LLTAADWVVLEMALQVLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAIP 89
            QDV TRW+S   M+ERL+E++ PI     + +  P  LTA +W ++     +L+PF      L    Y T SLV+P I  L+ +++   P
Sbjct:  344 QDVSTRWNSCLIMIERLIEIKNPISAAMSSLRRAPNFLTATEWDLIADCAPILKPFEHMTSELSGEKYPTLSLVIPLIRGLQYTVKNIKP 433

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot

BLAST of mRNA_H-elongata_contig59466.13460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KUY5_9PHAE	8.230e-19	51.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LCS5_ECTSI	1.230e-16	50.00	Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec...	[more]
UPI000B93611E	2.450e-9	37.78	zinc finger BED domain-containing protein 1-like n...	[more]
UPI000B939B7C	3.160e-9	40.86	zinc finger BED domain-containing protein 1-like n...	[more]
UPI000873C321	5.960e-9	40.00	zinc finger BED domain-containing protein 1-like n...	[more]
UPI000B939146	6.360e-9	36.59	zinc finger BED domain-containing protein 1-like n...	[more]
J9LSU7_ACYPI	8.650e-9	35.37	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac...	[more]
UPI000DC1421C	1.600e-8	34.88	zinc finger BED domain-containing protein 1-like n...	[more]
UPI001113BC33	2.230e-8	35.56	zinc finger BED domain-containing protein 1-like n...	[more]
J9LS52_ACYPI	2.270e-8	35.56	Uncharacterized protein n=1 Tax=Acyrthosiphon pisu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46169	FAMILY NOT NAMED	coord: 2..87
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig59466	contig	H-elongata_contig59466:1685..1960 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig59466.13460.1	mRNA_H-elongata_contig59466.13460.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig59466 1685..1960 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig59466.13460.1 ID=prot_H-elongata_contig59466.13460.1|Name=mRNA_H-elongata_contig59466.13460.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
QDVVTRWSSTCTMVERLLELREPIKTPDEADKVEPLLTAADWVVLEMALQ
VLQPFMQTQKSLECRNYVTGSLVVPFIHDLRTSLEGAIPPVS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf