prot_H-elongata_contig59435.13458.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59435.13458.1
Unique Nameprot_H-elongata_contig59435.13458.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
[Close]
BLAST of mRNA_H-elongata_contig59435.13458.1 vs. uniprot
Match: D7FRM6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM6_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.220e-65
Identity = 123/232 (53.02%), Postives = 148/232 (63.79%), Query Frame = 0 
Query:    5 ASEDAPNIEEEVRDFSRRFARLVISRAFREGGAS-----------------------------------------ADSGLRAGGFANTHVDVTPRGASALALSTFEAELSLRGSQRLGTQIQDDGDMLRSRVLPSLRENARQLHALYIAIDRMAKEVMPEMEDSVKRMEKAVYDLEEMRKEQVDTRGPRGSYGLGLALGAGLWAARPVESDVHIPEVFDTDKVFRVDDGGLA 195
            A +    IEEEVRDF+ RFARLV+SR+FREG                                             DSG   GG ++    + P   SAL     EAELSLRGSQRLG Q++ D  MLRS+V P+L ENAR+LHALY+AIDR+ +EVMPE++ +VKRMEKAVYDLEEMRKEQVDTR P+GS+GLGLALGAGLW  +  E  V +PEVFDTDK+FRV++GGLA
Sbjct:   12 ADDGEVGIEEEVRDFAARFARLVVSRSFREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGRNPGGSSS----LRPGERSALGSYVAEAELSLRGSQRLGAQLEKDAGMLRSKVFPALLENARKLHALYVAIDRVTEEVMPEVDATVKRMEKAVYDLEEMRKEQVDTRAPQGSFGLGLALGAGLWFPQMKEKGVTVPEVFDTDKLFRVEEGGLA 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59435.13458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM6_ECTSI1.220e-6553.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59435contigH-elongata_contig59435:2429..3025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59435.13458.1mRNA_H-elongata_contig59435.13458.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59435 2262..3331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59435.13458.1 ID=prot_H-elongata_contig59435.13458.1|Name=mRNA_H-elongata_contig59435.13458.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MSEAASEDAPNIEEEVRDFSRRFARLVISRAFREGGASADSGLRAGGFAN
THVDVTPRGASALALSTFEAELSLRGSQRLGTQIQDDGDMLRSRVLPSLR
ENARQLHALYIAIDRMAKEVMPEMEDSVKRMEKAVYDLEEMRKEQVDTRG
PRGSYGLGLALGAGLWAARPVESDVHIPEVFDTDKVFRVDDGGLATPL*
back to top