prot_H-elongata_contig59345.13446.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59345.13446.1
Unique Nameprot_H-elongata_contig59345.13446.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length301
Homology
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 3.110e-89
Identity = 139/286 (48.60%), Postives = 189/286 (66.08%), Query Frame = 0
Query:   16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRV-PFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            + V T F  AD++EEV+V+  PG+++ D       VMKL +SLYGL QSP NWF TI   +  I F +L  +PC+Y ++     + LTLYV+D+LL G +   +  +K ++   F+MTD G+ S VL M + R RE  T+TI Q+ Y   ILER+GM       TPG G EI   QP D +LD+++ ++YQ I G LMY++QV RY+I+Y   QLAR M KPSK HM A KH  RYLAG+ +FSITY++GGFKL T++ +NW  NP+NGKSTSSY+ +LAN P+ F
Sbjct:   29 MDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 314          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 3.560e-85
Identity = 145/302 (48.01%), Postives = 193/302 (63.91%), Query Frame = 0
Query:   16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKN----KQLL-------------GKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            + V T F  AD++EEV+V+  PG+++ D      VMKL +SLYGL QSP NWF TI   L  I F +L  +PC+Y ++     + LTLYV+D+LL G +    K LL             GKL+K+    F+MTD G+ S  L M + R RE  T+TI Q+ Y   ILER+GM       TPG G EI   QP D +LD+++ ++YQ I G LMY++QV RY+I+Y   QLAR+M KPSK HM A KH  RYLAG+ +FSITY++GGFKL T++ +NW  NP+NGKSTSSY+ +LAN P+ F
Sbjct:  238 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKR----FKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 535          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.330e-84
Identity = 139/285 (48.77%), Postives = 189/285 (66.32%), Query Frame = 0
Query:   16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            + V T F  AD++EEV+V+  PG+++ D      VMKL +SLYGL QSP NWF TI   L  I F +L  +PC+Y ++     + LTLYV+D+LL G +   +  +K ++   F+MTD G+ S VL M + R RE  T+TI Q+ Y   ILER+G+       TPG G EI   QP D +LD+++ ++YQ I G LMY++QV RY+I+Y   QLAR M KPSK HM A KH  RYLAG+ +FSITY++GGFKL T++ +NW  NP+NGKSTSSY+ +LAN P+ F
Sbjct: 1259 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSF 1543          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 2.340e-76
Identity = 128/251 (51.00%), Postives = 169/251 (67.33%), Query Frame = 0
Query:   50 VMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            VMKL +SLYGL QSP NWF TI   L  I F +L  +PC+Y ++     + LTLYV+D+LL G +   +  +K ++   F+MTD G+ S VL M + R RE  T+TI Q+ Y   ILER+GM       TPG G EI   QP D +LD+++ ++YQ I G LMY++QV RY+I+Y   QLAR M KPSK HM A KH  RYLAG+ +FSITY++GGFKL T++ +NW  NP+NGKSTSSY+ +LAN P+ F
Sbjct:  624 VMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 874          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 4.380e-75
Identity = 127/305 (41.64%), Postives = 186/305 (60.98%), Query Frame = 0
Query:    1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            M+ A+A E   EV  L V   F NA  + +VYV+  PG    D  R P      V KL++SLYGL QSP  W   I D L    ++    +PC+Y F  ++   IL +YV+DIL+ G NK+++   KK++MD FEMTD G++ +V+ + V R  E GT+ I Q  Y  DI +RYGM+  N   TPG G E+  +QP D++L  + KQR+Q+ITG L+YL+Q +RY+  Y V+QL RA   P++ HM A KH+ RYL G+ +  I Y++G F+L+ +T +++  NP+NG+S + Y+  L  G I +
Sbjct:    1 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRAHSDPCVYIFVRRDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSITGYLFFLGGGLISY 301          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.430e-74
Identity = 129/305 (42.30%), Postives = 190/305 (62.30%), Query Frame = 0
Query:    1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            M+ A+A E   EV  L V   F NA  + +VYV+  PG    D  R P      V KL++SLYGL QSP  W   I D L    ++    +PC+Y F   +   IL +YV+DIL+ G NK+++ + KK++MD FEMTD G++ +V+ + V R  E+GT+ I Q  Y  DIL+RYGM+  N   TPG G E+  +QP D++L  + KQR+Q+ITG L+YL+Q +RY++ Y V+QL RA   P++ HM A KH+ RYL G+ +  I Y++G F+L+ +T +++  NP+NG+ST+ Y+  L  G I +
Sbjct:  312 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISY 612          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 3.220e-73
Identity = 127/283 (44.88%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPI 298
            + V T F  AD++EEV+V+  PG+++ D      VMKL +SLYGL QSP NWF TI   L  I F +L  +PC+Y ++     + LTLYV+D+LL G +   +  +K ++   F+MTD G+ S VL M + R RE  T+TI Q+ Y   ILER+GM       TPG G EI   QP   +LD+++ ++YQ I G  MY++   +Y        LAR M KPSK HM A KH  R+L G+ +FSITY++GGFKL T++ +NW  NP+NGKST+SY+ +L N P+
Sbjct: 1424 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQYT------WLARPMAKPSKVHMVAAKHTLRFLVGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTASYLTMLVNAPM 1700          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 4.960e-72
Identity = 129/305 (42.30%), Postives = 189/305 (61.97%), Query Frame = 0
Query:    1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            M+ A+A E   EV  L V   F NA  + +VYV+  PG    D  R P      V KL++SLYGL QSP  W   I D L    ++    +PC+Y F   +   IL +YV+DIL+ G NK+++   KK++MD FEMTD G++ +V+ + V R  E+GT+ I Q  Y  DIL+RYGM+  N   TPG G E+  +QP D++L  + KQR+Q+ITG L+YL+Q +RY++ Y V+QL RA   P++ HM A KH+ RYL G+ +  I Y++G F+L+ +T +++  NP+NG+ST+ Y+  L  G I +
Sbjct: 1091 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISY 1391          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.790e-67
Identity = 106/251 (42.23%), Postives = 165/251 (65.74%), Query Frame = 0
Query:   50 VMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            V KL +SLYGL QSP  W  T+ + L+   ++    +PC+Y +   N  VILT+YV+DIL+ G ++QL+ + KK++ D FEMTD G++ ++L ++V R  E GT+ I Q++Y   +LER+GM+  N   TPG G EI  +QP D++L    K+ YQS+TG ++YL+Q +R+++ Y   QL++A   P++ +M A KHV RYL G+    I Y+RG F+L  +T +++  NP+NG+ST+ Y+  LA G I +
Sbjct:    2 VYKLARSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISY 252          
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 2.020e-67
Identity = 118/286 (41.26%), Postives = 182/286 (63.64%), Query Frame = 0
Query:   16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPR-VPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
            L V   F NA  + +VYV+  PG    +S    P V KL++SLYGL QSP  W  T+ + L+   ++    +PC+Y +   N  VILT+YV+DIL+ G ++QL+ + KK++ D FEMTD G++ ++L ++V R  E GT+ I Q++Y   +LER+GM+  N   TPG G EI  +QP D++L    K+ YQS+TG ++YL+Q +R+++ Y   QL++A   P++ +M A KHV RYL G+    I Y+RG F+L  +T +++  NP+NG+ST+ Y+  LA G I +
Sbjct:  450 LDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISY 735          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE3.110e-8948.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE3.560e-8548.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE2.330e-8448.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE2.340e-7651.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JW03_9PHAE4.380e-7541.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE1.430e-7442.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J842_9PHAE3.220e-7344.88Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KHG5_9PHAE4.960e-7242.30Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KAK0_9PHAE1.790e-6742.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE2.020e-6741.26Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..180
e-value: 4.9E-37
score: 127.9
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 100..279
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 52..275
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 100..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59345contigH-elongata_contig59345:468..1370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59345.13446.1mRNA_H-elongata_contig59345.13446.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59345 462..1691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59345.13446.1 ID=prot_H-elongata_contig59345.13446.1|Name=mRNA_H-elongata_contig59345.13446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFV
MKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVI
LTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRE
NGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQK
KQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRY
LAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like