prot_H-elongata_contig5930.13443.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5930.13443.1
Unique Nameprot_H-elongata_contig5930.13443.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
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BLAST of mRNA_H-elongata_contig5930.13443.1 vs. uniprot
Match: D8LN90_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=4 Tax=Phaeophyceae TaxID=2870 RepID=D8LN90_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.640e-10
Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:    1 MNGVIHLAGDTVFKGTCTFVNKSKEIRILPAVEYENANVDLTEAHG 46
            ++G + +AGDTVFKGTC+ VNKS E ++LPA EY +A+VDL+EA G
Sbjct:  435 VSGDVQMAGDTVFKGTCSVVNKSGESKVLPAGEYADASVDLSEAEG 480
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5930.13443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN90_ECTSI1.640e-1060.87UTP--glucose-1-phosphate uridylyltransferase n=4 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5930contigH-elongata_contig5930:9570..10037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5930.13443.1mRNA_H-elongata_contig5930.13443.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5930 9469..10551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5930.13443.1 ID=prot_H-elongata_contig5930.13443.1|Name=mRNA_H-elongata_contig5930.13443.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
MNGVIHLAGDTVFKGTCTFVNKSKEIRILPAVEYENANVDLTEAHGA*
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