mRNA_H-elongata_contig59149.13426.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59149.13426.1
Unique NamemRNA_H-elongata_contig59149.13426.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A6H5KCV4_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 3.950e-64
Identity = 156/320 (48.75%), Postives = 180/320 (56.25%), Query Frame = 1 
Query:    1 VVIPLESLDPEDYCLKAVDCYRLNIPVRVSAEGPGYVSTAEPMSPPRRRRGKNYRGDFALD-----KKSDLDALSSVRQVDDDHEXXXXXXXXXXXXEADEEKGAIVVRVVPTDGSSPQREENATTEATGPECSDEGEEGAIVAAAGSAVEPLSQSQLQSPSLGSRAMGEGKSSGLKCSAPPRPFVPPSADLLCPILSGPRKGTVLLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            V +PLESLDPE +CL     YRL++P+RVS EGPGYVS+ +PM+P  +                  K  D               XXXXXXXXXXX    EE G +V+ +     S P                                                                  FVPPSAD LCPI SGP KGTV+LGLDCEMV T EG+ LARATLVNVKGQ+VYD+LV+PT KVTD+ TQFSGIT EMLKGVTRTLRD Q EIL+FV A+TYLVGHSL+SDL AL++VHRRLIDTSELYP+ RG PFK
Sbjct:  291 VRVPLESLDPEAFCLTPAARYRLDMPIRVSEEGPGYVSSDQPMAPRTQEXXXXXXXXXXXXXXXXXKIWDKAQAHRXXXXXXXXXXXXXXXXXXXXGAIKEEDGEVVLGIEAPSPSLPXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEFVPPSADRLCPIPSGPHKGTVMLGLDCEMVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGIPFK 601
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BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.710e-62
Identity = 154/315 (48.89%), Postives = 179/315 (56.83%), Query Frame = 1 
Query:    1 VVIPLESLDPEDYCLKAVDCYRLNIPVRVSAEGPGYVSTAEPMSPPRRRRGKNYRGDFALDKKSDLDALSSVRQVDDDHEXXXXXXXXXXXXEADEEKGAIVVRVVPTDGSSPQREENATTEATGPECSDEGEEGAIVAAAGSAVEPLSQSQLQSPSLGSRAMGEGKSSGLKCSAPPRPFVPPSADLLCPILSGPRKGTVLLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            V +PLESL+PE +CL     YRL++P+RVS EGPGYVS+ +PM PPR +                   +    Q      XXXXXXXXXXX    EE G +V+ +     S P                                                                  FVPPSA  LCPI SGP KGTV+LGLDCEM+ T EG+ LARATLVNVKGQ VYD+LV+PT KVTD+ TQFSGIT EMLKGVTRTLRD Q EIL+FV A+TYLVGHSL+SDL AL++VHRRLIDTSELYP+ RG PFK
Sbjct:  357 VKVPLESLNPEAFCLTPAARYRLDMPIRVSEEGPGYVSSDQPM-PPRTQEXXXXXXXXXXXXXXXXXRIWDKAQAHRXXXXXXXXXXXXXXGAIKEEDGEVVLGIEAPSPSLPXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEFVPPSAGRLCPIPSGPHKGTVMLGLDCEMIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFK 663
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.260e-34
Identity = 67/122 (54.92%), Postives = 93/122 (76.23%), Query Frame = 1 
Query:  580 GPRKGTVLLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            G  +G  LLG+DCEMV+TK+G+ LAR +LVN +G+ VYD  VRP+  VT+  T++SGIT+  L+GVT TL+D Q ++L  + + TYLVGHSL+ DL AL++VH R+IDT+ LYPS +G P+K
Sbjct:   91 GHARGFKLLGIDCEMVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYK 212
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: UPI000CD9378F (small RNA degrading nuclease 5 isoform X4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9378F)

HSP 1 Score: 134 bits (337), Expect = 2.230e-32
Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            ++G+DCEM  T EG  L R TL++ KGQV+ D+LV+PT  +TD+ T++SGITSEML GVT TL+D Q E L  V  +T LVGHSLE+DL ALKI H  +IDT+ LY  SRG  +K
Sbjct:  211 IVGVDCEMCITNEGFELTRVTLIDFKGQVLLDKLVKPTNAITDYNTRYSGITSEMLNGVTTTLKDIQEEFLQIVNRETILVGHSLENDLLALKICHNLVIDTAVLYKHSRGGTYK 325
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A7C9ELN5_OPUST (Exonuclease domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ELN5_OPUST)

HSP 1 Score: 126 bits (317), Expect = 3.250e-32
Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            +L LDCEM  T EG  L R TLV++KGQVV D+LV+P+  + D+ T++SGIT EML GVT +L+D Q E L  V  +T L+GHSLE+DL ALKI H  +IDT+ LY   RG P+K
Sbjct:    1 MLALDCEMCITCEGFELTRVTLVDIKGQVVLDQLVKPSNPIIDYNTRYSGITPEMLNGVTTSLKDIQEEFLKLVFKETILIGHSLENDLLALKISHDLVIDTAILYKHPRGHPYK 115
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A2J6JLJ9_LACSA (Exonuclease domain-containing protein n=4 Tax=Lactuca TaxID=4235 RepID=A0A2J6JLJ9_LACSA)

HSP 1 Score: 134 bits (337), Expect = 8.880e-32
Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            ++G+DCEM  T EG  L R TL++ KGQV+ D+LV+PT  +TD+ T++SGITSEML GVT TL+D Q E L  V  +T LVGHSLE+DL ALKI H  +IDT+ LY  SRG  +K
Sbjct:  211 IVGVDCEMCITNEGFELTRVTLIDFKGQVLLDKLVKPTNAITDYNTRYSGITSEMLNGVTTTLKDIQEEFLQIVNRETILVGHSLENDLLALKICHNLVIDTAVLYKHSRGGTYK 325
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: I0Z456_COCSC (Exonuclease domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z456_COCSC)

HSP 1 Score: 127 bits (319), Expect = 2.190e-31
Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 1 
Query:  511 LKCSAPPRPFVPPSADLLCPI------LSGPRKGTVLLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            LK S  P P V P   L CP         G  +   L+GLDCEM  T+EG  L R +LV+ +GQV+ D+LV P   +TD+ T++SGIT+EML  VT  L D Q + L  V A+  LVGH+L++DL ALKI+H  +IDT+ LYP  +G P++
Sbjct:   49 LKSSEYPLPIVGPDGKLECPEGYIATKAGGGDEEPALIGLDCEMCVTEEGFELTRISLVDHQGQVMLDQLVVPDNPITDYNTRYSGITAEMLAPVTTRLADIQVKFLELVPAEALLVGHALQNDLRALKILHANIIDTAFLYPHPKGPPYR 199
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A5J5WLS4_GOSBA (Exonuclease domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5J5WLS4_GOSBA)

HSP 1 Score: 131 bits (329), Expect = 2.350e-31
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            +L LDCEM  T EG  L R TLV+++GQVV D+LV+P+  +TD+ T+FSGIT EML GVT TL++ Q + LT V  DT LVGHSLE+DL ALKI H  +IDTS +Y   RG  +K
Sbjct:  209 MLALDCEMCITSEGFELTRVTLVDIEGQVVLDKLVKPSNPITDYNTRFSGITHEMLSGVTTTLQNVQEDFLTLVHKDTILVGHSLENDLLALKISHDLIIDTSVIYEHPRGGSYK 323
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A444Z2Y9_ARAHY (Exonuclease domain-containing protein n=8 Tax=Arachis TaxID=3817 RepID=A0A444Z2Y9_ARAHY)

HSP 1 Score: 133 bits (334), Expect = 2.410e-31
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            +L LDCEM  T EG  L R TLVN+ GQVV D+LV+P+  + D+ T+FSGIT EML GVT TLRD Q E L  V  +T+LVGHSLE+DL ALKI H  +IDT+ LY + RGA +K
Sbjct:  219 ILALDCEMCITTEGFELTRVTLVNINGQVVIDKLVKPSNDIVDYNTRFSGITYEMLDGVTTTLRDIQKEFLELVYKETFLVGHSLENDLLALKISHDLIIDTAVLYKNPRGASYK 333
[Close]
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Match: A0A251MR96_PRUPE (Exonuclease domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251MR96_PRUPE)

HSP 1 Score: 132 bits (332), Expect = 4.110e-31
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 1 
Query:  601 LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSGITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLIDTSELYPSSRGAPFK 945
            +L LDCEM  T EG+ L RATLV +KG+VV D+LV+PT  + D+ T+FSGITSEML GVT +L+D Q E L  V  +T LVGHSLE+DL ALKI H  +IDT+ LY  SRG  +K
Sbjct:  214 MLALDCEMCVTSEGLELTRATLVTIKGKVVLDKLVKPTNTIVDYNTRFSGITSEMLDGVTTSLKDIQDEFLKLVYKETILVGHSLENDLLALKISHNLVIDTAVLYRYSRGGSYK 328
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59149.13426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCV4_9PHAE3.950e-6448.75Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
D7FQ11_ECTSI1.710e-6248.89Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A836CFL3_9STRA1.260e-3454.92Exonuclease domain-containing protein n=1 Tax=Trib... [more]
UPI000CD9378F2.230e-3257.39small RNA degrading nuclease 5 isoform X4 n=1 Tax=... [more]
A0A7C9ELN5_OPUST3.250e-3255.65Exonuclease domain-containing protein n=2 Tax=Opun... [more]
A0A2J6JLJ9_LACSA8.880e-3257.39Exonuclease domain-containing protein n=4 Tax=Lact... [more]
I0Z456_COCSC2.190e-3146.36Exonuclease domain-containing protein n=1 Tax=Cocc... [more]
A0A5J5WLS4_GOSBA2.350e-3157.39Exonuclease domain-containing protein n=4 Tax=Goss... [more]
A0A444Z2Y9_ARAHY2.410e-3159.13Exonuclease domain-containing protein n=8 Tax=Arac... [more]
A0A251MR96_PRUPE4.110e-3159.13Exonuclease domain-containing protein n=7 Tax=Prun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59149contigH-elongata_contig59149:981..3662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.0
Seed ortholog evalue6e-57
Seed eggNOG ortholog2880.D7FQ11
KEGG rclassRC01469
KEGG koko:K06118,ko:K14570
KEGG ReactionR05775
KEGG Pathwayko00520,ko00561,ko03008,map00520,map00561,map03008
EggNOG free text desc.exonuclease activity
EggNOG OGsCOG0847@1,KOG2248@2759
Ec32 ortholog descriptionExonuclease
Ec32 orthologEc-01_007890.1
EC3.13.1.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons8
Model size945
Cds size945
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59149.13426.1prot_H-elongata_contig59149.13426.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59149 981..3662 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930959.867564-CDS-H-elongata_contig59149:980..10311622930959.867564-CDS-H-elongata_contig59149:980..1031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 981..1031 +
1691679641.0226367-CDS-H-elongata_contig59149:980..10311691679641.0226367-CDS-H-elongata_contig59149:980..1031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 981..1031 +
1622930959.886236-CDS-H-elongata_contig59149:1320..14461622930959.886236-CDS-H-elongata_contig59149:1320..1446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1321..1446 +
1691679641.0357854-CDS-H-elongata_contig59149:1320..14461691679641.0357854-CDS-H-elongata_contig59149:1320..1446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1321..1446 +
1622930959.905856-CDS-H-elongata_contig59149:1548..17681622930959.905856-CDS-H-elongata_contig59149:1548..1768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1549..1768 +
1691679641.0459268-CDS-H-elongata_contig59149:1548..17681691679641.0459268-CDS-H-elongata_contig59149:1548..1768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1549..1768 +
1622930959.9429-CDS-H-elongata_contig59149:1828..18681622930959.9429-CDS-H-elongata_contig59149:1828..1868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1829..1868 +
1691679641.0577867-CDS-H-elongata_contig59149:1828..18681691679641.0577867-CDS-H-elongata_contig59149:1828..1868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 1829..1868 +
1622930959.9594407-CDS-H-elongata_contig59149:2018..22051622930959.9594407-CDS-H-elongata_contig59149:2018..2205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 2019..2205 +
1691679641.0653236-CDS-H-elongata_contig59149:2018..22051691679641.0653236-CDS-H-elongata_contig59149:2018..2205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 2019..2205 +
1622930959.9708393-CDS-H-elongata_contig59149:2632..27211622930959.9708393-CDS-H-elongata_contig59149:2632..2721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 2633..2721 +
1691679641.072772-CDS-H-elongata_contig59149:2632..27211691679641.072772-CDS-H-elongata_contig59149:2632..2721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 2633..2721 +
1622930959.982832-CDS-H-elongata_contig59149:3068..31271622930959.982832-CDS-H-elongata_contig59149:3068..3127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 3069..3127 +
1691679641.0802867-CDS-H-elongata_contig59149:3068..31271691679641.0802867-CDS-H-elongata_contig59149:3068..3127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 3069..3127 +
1622930960.0122006-CDS-H-elongata_contig59149:3489..36621622930960.0122006-CDS-H-elongata_contig59149:3489..3662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 3490..3662 +
1691679641.0878727-CDS-H-elongata_contig59149:3489..36621691679641.0878727-CDS-H-elongata_contig59149:3489..3662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59149 3490..3662 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59149.13426.1

>prot_H-elongata_contig59149.13426.1 ID=prot_H-elongata_contig59149.13426.1|Name=mRNA_H-elongata_contig59149.13426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp
VVIPLESLDPEDYCLKAVDCYRLNIPVRVSAEGPGYVSTAEPMSPPRRRR
GKNYRGDFALDKKSDLDALSSVRQVDDDHEDDNYEEQEKEDGEADEEKGA
IVVRVVPTDGSSPQREENATTEATGPECSDEGEEGAIVAAAGSAVEPLSQ
SQLQSPSLGSRAMGEGKSSGLKCSAPPRPFVPPSADLLCPILSGPRKGTV
LLGLDCEMVDTKEGMGLARATLVNVKGQVVYDELVRPTKKVTDFKTQFSG
ITSEMLKGVTRTLRDTQYEILTFVGADTYLVGHSLESDLHALKIVHRRLI
DTSELYPSSRGAPFK
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mRNA from alignment at H-elongata_contig59149:981..3662+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59149.13426.1 ID=mRNA_H-elongata_contig59149.13426.1|Name=mRNA_H-elongata_contig59149.13426.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2682bp|location=Sequence derived from alignment at H-elongata_contig59149:981..3662+ (Himanthalia elongata Himel1 dioecious)
GTCGTGATTCCGCTCGAATCGCTTGATCCGGAGGATTATTGCCTCAAAGC
AGTGAGTATCAGGGTCATTTTTTTTTAAGATGGTCGAAATAATAGCTCAT
AAATATGGCTATTGCTATTGTTTACGAAGAACCACTTGAAAAGGCGAAGA
ATAATGTTGTTGGGTGTCTGTGAAGGCTAAATGCACACAACCCTCGCGCG
ATCAGATGCCGGTCTATTTAAGCGCGCGTCTTAATGGGTTTGGATTTGGA
CCTGCGAACCGCGCTCGCCCTTGCTGCTCCTCCCCCCCCCCATCCCCTCT
CGATAACCCGTTTTTTGTGTATACCGTCGGCCGACAACAGGTGGACTGTT
ACCGGCTGAACATTCCTGTTCGCGTCTCGGCAGAGGGGCCCGGCTATGTC
TCTACCGCCGAACCGATGTCGCCTCCTCGGCGACGGAGAGGAAAGAATTA
CCGGGGTGATTTCGCAGTGCGACGAGAAAATGGCGACGGAGGGAGCGCTT
CGTGCGAGGACAGCGAGAACACGACACTTGAGAGATTGGGAGGGAGGAAG
GCATCGGATGACATGGAGCTTGACAAAAAAAGCGACTTGGACGCGCTATC
GAGCGTTCGGCAAGTTGACGACGATCACGAAGATGACAACTACGAGGAGC
AGGAGAAAGAAGATGGTGAAGCGGATGAAGAGAAGGGGGCGATAGTCGTT
CGGGTGGTACCCACGGATGGAAGTTCACCACAGAGAGAGGAGAATGCAAC
GACAGAAGCAACGGGGCCAGAGTGTAGTGATGAAGGCGGTGGGGATGGGA
GTCGGGGGGTGAAAACGCTCCGAGAAGGACCGGAGGAGGAAGAGGAAGAG
GAGGGTGCCATCGTTGCCGCTGCCGGTAGCGCGGTAGAGTCTCGCCACGC
CAGCGTGACGAGACGAGACGACGACGCTCTGGAGGTGATAGATGCCAATC
CTGACGAGGACGAGGAGGGTGAGATCGTCATCCCGACACCGCAACGATCC
TCGTCAAGGCGCCCTTCGCAGCCGTCGAAGTTTCCCAGGCCGCTGTCGCA
ATCGCAATTGCAATCGCCGTCGCTGGGCTCAAGGGCAATGGGCGAAGGGA
AATCTAGCGGGCTGAAGTGCTCGGCGCCACCTCGCCCTTTTGTCCCTCCT
TCTGCGGATCTGCTTTGTCCGATTTTGTCCGGGCCGCGCAAGGGTACTGT
CCTGTTGGGGTTAGACTGCGAAATGGTGAGTAGCGTGATGGATGATTCAA
AAATGATCTCCATTGTCCTGAACAGCCCAACTCCTCGCCCCGCCCCCGCC
TTTCGGTCTCTTTTAACAGGTCGTGTATTCATGCGCGTTGATTGTGTCGC
TGCTTAGTTATTCGAGGCGCTGTTTGATTGTGTCGGTTGGTCGAATGTGG
TCAACGTTGATGAAGTTGAAACGGTTGCCGGGATGAGGACGGCTAATATT
TCAGTGCCGAAGGTTGCCTCTTCGCGTGGTGTGCCGACTCCTCAAGCCTG
AAGGTTTCGCTGAAATCACTCCACCTAAATGGGGAGTCATCACGTAAAGA
AAATAGGGGACGAATAATGGCTTGGGTAAGGATATAACTTTTCGCTTCAC
CCCACCCCACCCCCAACACGGTAACGTCTTCTTCCTCTCCCGGAAACCCG
AGGTGGACACAAAAGAAGGGATGGGCCTAGCCCGCGCGACGCTCGTCAAC
GTGAAGGGGCAGGTCGTGTACGACGAGCTCGTCAGACCGACGTGAGTCTG
TCGTATTCATCGTGAACACGAACGTATCACACCATGGGATAGTTCCTTGG
CCCTGTCGCTAGTGCTTGTAGGCAGAGAGAAAGAAGAACCCGCGGCGGCT
CTAGCTTGGCCGCGCGGAGATGTGCGTCGTCAAACACGATCTTCGCTTCG
CCATTTATACCCCCCCCCGCGCGCGCGCGCATACCCCCTCACCTTGCGCC
TGTGTTCCGTTTTTACCTGTGATCTGTGCTCTGTGAGCCACCGCCTTGAA
TTGCCTCGACTTGCCTCGCCTTGCCCGTTGTTTTGTTCATTTCTCTTTTC
GGGGTACTTTTTTATGGATGCGCGGTTGAGAATTACAGGAAAAAAGTGAC
AGACTTTAAGACACAGTTCAGCGGCATCACATCCGAGATGCTCAAGGGTG
AGTCACGAGTCATGAACCACGCCGAAGCGAAGAAAATTGAGATAAGATTC
TTCTGCAATAGCCTCCAGCAGGCCGAGGCGTTGTCGGGAGGCCTGTCTCG
TCGAGCCACGCTCCGCGGTGTTTGCAATGTCCGACTTACATTCGTCGGAA
AGCTAGTTGGGTCTGGAACCTACGTGGCACTTTGCAGTCATGAGTATCCC
CGATCAAAACTTTGCTAGTATATTTTAGTCAATCAAAACTTAGCAGGCGT
CACCAATACGAGTATGCTACAGTTGTACCTAGGGTTTGACGATAACACAG
CTGGCTGCAACCAAGAAATTGCAAACATTTTGGGGGTGGGTGTCCGGGTT
TTGTCCCAGGGGTCACGCGGACTCTGCGGGATACACAGTACGAGATTCTG
ACGTTTGTCGGCGCCGATACATACCTGGTGGGGCACAGCCTGGAGAGCGA
CCTGCACGCGCTGAAGATTGTACACCGCCGGCTGATCGACACGTCTGAGC
TTTACCCGAGCTCGAGGGGCGCCCCTTTCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig59149:981..3662+

>mRNA_H-elongata_contig59149.13426.1 ID=mRNA_H-elongata_contig59149.13426.1|Name=mRNA_H-elongata_contig59149.13426.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1890bp|location=Sequence derived from alignment at H-elongata_contig59149:981..3662+ (Himanthalia elongata Himel1 dioecious)
GTCGTGATTCCGCTCGAATCGCTTGATCCGGAGGATTATTGCCTCAAAGC
AGTCGTGATTCCGCTCGAATCGCTTGATCCGGAGGATTATTGCCTCAAAG
CAGTGGACTGTTACCGGCTGAACATTCCTGTTCGCGTCTCGGCAGAGGGG
CCCGGCTATGTCTCTACCGCCGAACCGATGTCGCCTCCTCGGCGACGGAG
AGGAAAGAATTACCGGGGTGATTTCGCAGTGGACTGTTACCGGCTGAACA
TTCCTGTTCGCGTCTCGGCAGAGGGGCCCGGCTATGTCTCTACCGCCGAA
CCGATGTCGCCTCCTCGGCGACGGAGAGGAAAGAATTACCGGGGTGATTT
CGCACTTGACAAAAAAAGCGACTTGGACGCGCTATCGAGCGTTCGGCAAG
TTGACGACGATCACGAAGATGACAACTACGAGGAGCAGGAGAAAGAAGAT
GGTGAAGCGGATGAAGAGAAGGGGGCGATAGTCGTTCGGGTGGTACCCAC
GGATGGAAGTTCACCACAGAGAGAGGAGAATGCAACGACAGAAGCAACGG
GGCCAGAGTGTAGTGATGAAGGCGCTTGACAAAAAAAGCGACTTGGACGC
GCTATCGAGCGTTCGGCAAGTTGACGACGATCACGAAGATGACAACTACG
AGGAGCAGGAGAAAGAAGATGGTGAAGCGGATGAAGAGAAGGGGGCGATA
GTCGTTCGGGTGGTACCCACGGATGGAAGTTCACCACAGAGAGAGGAGAA
TGCAACGACAGAAGCAACGGGGCCAGAGTGTAGTGATGAAGGCGAGGAGG
GTGCCATCGTTGCCGCTGCCGGTAGCGCGGTAGAAGGAGGGTGCCATCGT
TGCCGCTGCCGGTAGCGCGGTAGAGCCGCTGTCGCAATCGCAATTGCAAT
CGCCGTCGCTGGGCTCAAGGGCAATGGGCGAAGGGAAATCTAGCGGGCTG
AAGTGCTCGGCGCCACCTCGCCCTTTTGTCCCTCCTTCTGCGGATCTGCT
TTGTCCGATTTTGTCCGGGCCGCGCAAGGGTACTGTCCTGTTGGGGTTAG
ACTGCGAAATGGCCGCTGTCGCAATCGCAATTGCAATCGCCGTCGCTGGG
CTCAAGGGCAATGGGCGAAGGGAAATCTAGCGGGCTGAAGTGCTCGGCGC
CACCTCGCCCTTTTGTCCCTCCTTCTGCGGATCTGCTTTGTCCGATTTTG
TCCGGGCCGCGCAAGGGTACTGTCCTGTTGGGGTTAGACTGCGAAATGGT
GGACACAAAAGAAGGGATGGGCCTAGCCCGCGCGACGCTCGTCAACGTGA
AGGGGCAGGTCGTGTACGACGAGCTCGTCAGACCGACGTGGACACAAAAG
AAGGGATGGGCCTAGCCCGCGCGACGCTCGTCAACGTGAAGGGGCAGGTC
GTGTACGACGAGCTCGTCAGACCGACGAAAAAAGTGACAGACTTTAAGAC
ACAGTTCAGCGGCATCACATCCGAGATGCTCAAGGGAAAAAAGTGACAGA
CTTTAAGACACAGTTCAGCGGCATCACATCCGAGATGCTCAAGGGGGTCA
CGCGGACTCTGCGGGATACACAGTACGAGATTCTGACGTTTGTCGGCGCC
GATACATACCTGGTGGGGCACAGCCTGGAGAGCGACCTGCACGCGCTGAA
GATTGTACACCGCCGGCTGATCGACACGTCTGAGCTTTACCCGAGCTCGA
GGGGCGCCCCTTTCAAGGGGTCACGCGGACTCTGCGGGATACACAGTACG
AGATTCTGACGTTTGTCGGCGCCGATACATACCTGGTGGGGCACAGCCTG
GAGAGCGACCTGCACGCGCTGAAGATTGTACACCGCCGGCTGATCGACAC
GTCTGAGCTTTACCCGAGCTCGAGGGGCGCCCCTTTCAAG
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