mRNA_H-elongata_contig59090.13420.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59090.13420.1
Unique NamemRNA_H-elongata_contig59090.13420.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: D7FY29_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY29_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.280e-117
Identity = 164/197 (83.25%), Postives = 183/197 (92.89%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            ++AQC IL+ RGND FDSYVLSESSLFVYK+KLVLKTCGTTTLLRCLPLLTVV+KNYGL+LEWIGYSRK+FTFPT+Q YPHTSFAEEVDFL+ MF+GSA VHGPLNSDHWYTYVADDCKK T+AAADRTLN+MMY LEP+VA+NF+K+  I+T EDVSSRSGI+ VLP A LQDHLFEPCGYSMNALEG+AYYTVHV
Sbjct:   84 EQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHV 280          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 4.610e-66
Identity = 101/203 (49.75%), Postives = 144/203 (70.94%), Query Frame = 1
Query:    4 KAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLP-LLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFL------ETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +A+C IL+   ND+ D+YVLSESSLFVY  K+V+KTCGTTTLLRC+  LL    +  GL LEW+GYSRK+FTFP++Q++PH+SF +E+ +L      E    G+  V GP+  DHW+ Y+AD C +P   A DRT+N+MM+ + PD AK+F+K +   T  +++ ++GI E++P A + D  F+PCGYSMNA+   +YYT+HV
Sbjct:  116 RAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEA-CPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHV 317          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A484E2K2_BRELC (Adenosylmethionine decarboxylase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2K2_BRELC)

HSP 1 Score: 209 bits (532), Expect = 3.320e-63
Identity = 108/213 (50.70%), Postives = 142/213 (66.67%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYV--ADDCKKPTS------------AAADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +  QCQIL+   N+  D+YVLSESS+F+Y  K+VLKTCGTTTLL+CLP +   +++ GLS+EW+ YSRK++TFP EQ YPHTSF  EV FL + F  GSA V GPLN DHWY Y   AD  ++P S            AA + TL I+M  + P VAK F KS+D   T+  ++  SGIR+++P A + D  F+PCGYSMN +   AYYT+H+
Sbjct:   65 EAGQCQILSRTSNEHIDAYVLSESSMFIYTHKIVLKTCGTTTLLKCLPFIKTFSEHLGLSIEWVSYSRKNYTFPEEQKYPHTSFHTEVAFLSSFFPDGSAHVLGPLNHDHWYIYAWDADIHEQPASRTQSPSYSLKETAANESTLQILMQDMHPKVAKQFFKSTDSSMTSRRMTIESGIRDLVPGAIIDDFSFDPCGYSMNGILFDAYYTIHI 277          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A0P1AUS8_PLAHL (Adenosylmethionine decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUS8_PLAHL)

HSP 1 Score: 205 bits (522), Expect = 9.960e-62
Identity = 104/211 (49.29%), Postives = 136/211 (64.45%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMF-TGSAVVHGPLNSDHWYTYVAD-DCKKPTS-----------AAADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +  QCQIL+   ND  D+YVLSESS+F+Y  K+VLKTCGTTTLL+CLP +   +   GL +EW+ YSRK++TFP EQ YPHTSF  EV FL + F  GSA V GPLN DHWY Y  D D  + T             A + TL ++M  ++P VAK F K+ D   T+  ++  SGIR+++P A + D  F+PCGYSMN +   AYYT+H+
Sbjct:   65 EAGQCQILSRTSNDHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPFIKTFSNRLGLEIEWVSYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPNGSAHVLGPLNHDHWYIYAWDADIHEHTDLLPVNLPHKEVGANESTLQVLMQDMDPSVAKQFFKNDDSTITSRRMTIESGIRDLVPGALIDDFAFDPCGYSMNGILFDAYYTIHI 275          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: H3GXV0_PHYRM (S-adenosylmethionine decarboxylase proenzyme n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GXV0_PHYRM)

HSP 1 Score: 204 bits (518), Expect = 3.860e-61
Identity = 105/211 (49.76%), Postives = 139/211 (65.88%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYV--ADDCKKPTSAAA----------DRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +  QCQIL+   N+  D+YVLSESSLFVY  K+VLKTCGTTTLL+CLP +   ++  GLS+EW+ YSRK++TFP EQ YPHTSF  EV FL + F  GSA V GPLN DHWY Y   AD   +P +             + TL+++M  + P VAK F K++D   T+  ++  SGIR+++P A + D  F+PCGYSMN +   AYYT+H+
Sbjct:   65 EAGQCQILSRTSNEHIDAYVLSESSLFVYAHKVVLKTCGTTTLLKCLPFIKTFSERLGLSIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPDGSAHVLGPLNRDHWYIYAWDADIHGEPGALTHNYALEEPGQNESTLHVLMQDMHPSVAKQFFKNNDSTLTSRRMTIESGIRDLVPGAVIDDFAFDPCGYSMNGILFDAYYTIHI 275          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A8J2WZ11_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ11_9STRA)

HSP 1 Score: 203 bits (516), Expect = 7.900e-61
Identity = 102/210 (48.57%), Postives = 141/210 (67.14%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLP-LLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFL-------ETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFH----KSSDIRTA-EDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            ++A+C IL+   N   D+YVLSESSLFVY  K+V+KTCG TTLLRCL  L+   T   GL LEW+GYSRK++ FP +Q+ PH  F +E+ +L       E +F GS  V GPL  DHW+ YV+D C++P S+A +RT+N+MM+ L  DV ++FH    + SD+R A   ++ RSG++ ++P   + DH F PCGYS+NAL   +Y TVHV
Sbjct:   64 EEARCTILSRMSNAHLDAYVLSESSLFVYAHKVVVKTCGRTTLLRCLRRLVQEATSTLGLQLEWVGYSRKNYCFPDDQVAPHGCFEDELRYLKAHQGDAEKVFDGSGYVLGPLTGDHWFVYVSDQCERPASSATERTVNVMMFDLPEDVRRHFHLQGDEDSDLRAAGRAMTQRSGLKALIP-GKVDDHAFAPCGYSLNALSFESYTTVHV 272          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A812R309_9DINO (Adenosylmethionine decarboxylase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R309_9DINO)

HSP 1 Score: 204 bits (518), Expect = 8.080e-61
Identity = 100/198 (50.51%), Postives = 137/198 (69.19%), Query Frame = 1
Query:    7 AQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRT--AEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            A C +L+   N+ F SYVLSESS+FVY+ K+++KTCGTTTLL  LP +    K  G+ +EW+ +SRKDF+FP EQ +PH    EEV FL+     GSA V GP+  DHW  +VAD C++P++ + D TLN+MMY ++P VA  F +  + RT  A +V+S + I  +LP +T+QD LF+PCGYSMN L G AY+T+HV
Sbjct:   48 AACGVLSIVTNEHFHSYVLSESSMFVYRHKVIIKTCGTTTLLAMLPHVERRIKELGMDIEWLAFSRKDFSFPAEQKFPHRGIQEEVSFLQAAHPQGSAYVLGPITGDHWMVFVADYCERPSAESTDCTLNVMMYDIDPSVAAMFQEQYEGRTLTAAEVTSLTRIDTLLPGSTIQDVLFQPCGYSMNGLLGEAYWTIHV 245          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: M4BIM5_HYAAE (Adenosylmethionine decarboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIM5_HYAAE)

HSP 1 Score: 203 bits (517), Expect = 8.220e-61
Identity = 104/214 (48.60%), Postives = 137/214 (64.02%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVAD-DCKKPTSA--------------AADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +  QCQIL+   N+  D+YVLSESS+F+Y  K+VLKTCGTTTLL+CLP +    +  GL +EW+ YSRK++TFP EQ YPHTSF  EV FL + F  GSA V GPLN DHWY Y  D D  +  S               A + TL+++M  + P VAK F KS+D    +  ++  SGIR+++P AT+ D  F+PCGYSMN +   AYYT+H+
Sbjct:   57 EAGQCQILSRISNEHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPFIKTFAERLGLEIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPDGSAHVLGPLNHDHWYIYAWDADIHEHQSVTDVLIHPGMGKELGANESTLHVLMQDMHPSVAKQFFKSNDTTMVSRQMTIESGIRDLVPGATIDDFAFDPCGYSMNGILFDAYYTIHI 270          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.260e-60
Identity = 99/203 (48.77%), Postives = 137/203 (67.49%), Query Frame = 1
Query:    4 KAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNY-GLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLET------MFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +A+C I++   N   D+YVLSESSLFVY  K+VLKTCG TTLLRCLP L    + Y G  LEW+GYSRK+F +PT+Q++PHTSF +E+ +L+         +GSA + GPL  DHW+ YVAD  ++P    +DRT+NIMM+ +  D A+ F+K     TAE+ +  SGI  ++P A +    FEPCGYSMNA++  +Y T+H+
Sbjct:  118 RAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYKDK-YPTAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHI 319          
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: K3WA15_GLOUD (Adenosylmethionine decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA15_GLOUD)

HSP 1 Score: 202 bits (514), Expect = 1.750e-60
Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 1
Query:    1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVAD----------DCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSD-IRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
            +  QC IL+   N+  D+YVLSESS+FVY  K+V+KTCGTTTLL+ LP +    +  G+ +EW+ YSRK++TFP EQ+YPHTSF  EV FL   F  GSA V GPLN DHWY YV D             +P +A+ + TL+++M  + P VA+ F K +D   T+  ++  SGIR+++P A L D  F+PCGYSMN +   AYYT+H+
Sbjct:   73 EAGQCMILSKTSNEHIDAYVLSESSMFVYAHKVVIKTCGTTTLLKTLPFIRKYAERLGMEIEWVSYSRKNYTFPEEQVYPHTSFQTEVAFLNDFFPDGSAHVLGPLNHDHWYIYVWDADEHEPSIAGGVHRPLTASNESTLHVLMQDMHPTVAQKFFKEADPTMTSRRMTIESGIRDLVPGAVLDDFAFDPCGYSMNGILFDAYYTIHI 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY29_ECTSI1.280e-11783.25Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
D7G8P6_ECTSI4.610e-6649.75Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
A0A484E2K2_BRELC3.320e-6350.70Adenosylmethionine decarboxylase n=1 Tax=Bremia la... [more]
A0A0P1AUS8_PLAHL9.960e-6249.29Adenosylmethionine decarboxylase n=1 Tax=Plasmopar... [more]
H3GXV0_PHYRM3.860e-6149.76S-adenosylmethionine decarboxylase proenzyme n=21 ... [more]
A0A8J2WZ11_9STRA7.900e-6148.57Adenosylmethionine decarboxylase n=1 Tax=Pelagomon... [more]
A0A812R309_9DINO8.080e-6150.51Adenosylmethionine decarboxylase n=1 Tax=Symbiodin... [more]
M4BIM5_HYAAE8.220e-6148.60Adenosylmethionine decarboxylase n=1 Tax=Hyalopero... [more]
A0A7S1UFX8_9STRA1.260e-6048.77Adenosylmethionine decarboxylase n=2 Tax=Phaeomona... [more]
K3WA15_GLOUD1.750e-6047.85Adenosylmethionine decarboxylase n=1 Tax=Globispor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59090contigH-elongata_contig59090:56..3138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.4
Seed ortholog evalue3e-54
Seed eggNOG ortholog2880.D7G8P6
Preferred nameAMD1
KEGG rclassRC00299
KEGG koko:K01581,ko:K01611,ko:K15203
KEGG ReactionR00178,R00670
KEGG Pathwayko00270,ko00330,ko00480,ko01100,ko01110,ko01130,map00270,map00330,map00480,map01100,map01110,map01130
KEGG ModuleM00034,M00133,M00134
GOsGO:0001701,GO:0003674,GO:0003824,GO:0004014,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0015939,GO:0015940,GO:0016032,GO:0016053,GO:0016458,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0019058,GO:0019079,GO:0019222,GO:0019752,GO:0019808,GO:0019810,GO:0032501,GO:0032502,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042401,GO:0042742,GO:0043009,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046500,GO:0048519,GO:0048731,GO:0048856,GO:0050789,GO:0050829,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070405,GO:0071704,GO:0072330,GO:0097164,GO:0098542,GO:0099402,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.S-adenosylmethioninamine biosynthetic process
EggNOG OGsKOG0788@1,KOG0788@2759
EC4.1.1.17,4.1.1.50
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-Adenosylmethionine decarboxylase
Ec32 orthologEc-27_006890.1
Exons4
Model size591
Cds size591
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59090.13420.1prot_H-elongata_contig59090.13420.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59090 56..3138 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930958.7147307-CDS-H-elongata_contig59090:55..1891622930958.7147307-CDS-H-elongata_contig59090:55..189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 56..189 +
1691679640.6280031-CDS-H-elongata_contig59090:55..1891691679640.6280031-CDS-H-elongata_contig59090:55..189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 56..189 +
1622930958.7561548-CDS-H-elongata_contig59090:901..9981622930958.7561548-CDS-H-elongata_contig59090:901..998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 902..998 +
1691679640.641227-CDS-H-elongata_contig59090:901..9981691679640.641227-CDS-H-elongata_contig59090:901..998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 902..998 +
1622930958.7734268-CDS-H-elongata_contig59090:1759..19781622930958.7734268-CDS-H-elongata_contig59090:1759..1978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 1760..1978 +
1691679640.6506824-CDS-H-elongata_contig59090:1759..19781691679640.6506824-CDS-H-elongata_contig59090:1759..1978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 1760..1978 +
1622930958.785884-CDS-H-elongata_contig59090:2997..31381622930958.785884-CDS-H-elongata_contig59090:2997..3138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 2998..3138 +
1691679640.660414-CDS-H-elongata_contig59090:2997..31381691679640.660414-CDS-H-elongata_contig59090:2997..3138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59090 2998..3138 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59090.13420.1

>prot_H-elongata_contig59090.13420.1 ID=prot_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLL
TVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFTGSAV
VHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSD
IRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV
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mRNA from alignment at H-elongata_contig59090:56..3138+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59090.13420.1 ID=mRNA_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3083bp|location=Sequence derived from alignment at H-elongata_contig59090:56..3138+ (Himanthalia elongata Himel1 dioecious)
CAAAAGGCGCAGTGCCAGATTCTCAACCATCGGGGCAACGACTTCTTCGA CTCCTACGTGCTGTCGGAGAGCAGCTTGTTCGTCTACAAGGCCAAGCTCG TGCTCAAGACCTGTGGAACAACGACACTGCTCAGGTATAGTAAATTATAC TATACTGTAATTATAATAGATATCGGAGCAAATAACTTTGATTAAATACT GCGATACAGATATTTGAGTGTCCCACAACGCCATGGGCGCATTTGAATGC GATATCGTAACGCCCCTCATCCCACAGGAGACCCTTCCCATGCTTTATTT TAGGAGGTACATTTTTCGTTGCTTTAAAAAATATATATCTCAGTTCGTAG CGCGATATTTCCAGCTCCGCGTGGTTTGGTAGAAGTTGAAATGATTTCAT TAGATATTCTAGATTTTTTGAAAGGAGGGGAAGGCGTTTTCCTTTTGATC CGGGTTATGTTGTCCACTGAAAGGCTGTCGATTTCATCCAACCTTGGAAG CGCAGTACTTATCGAGTCAAGTTGAAGTGAATTCCAGCAGAGGCTTGTTC GTGTTCGGACTCCTGCAGACATCATTTAAGGTATTGATTATTGATTGATT ATATTCCAAATGTAGAAAGGGTATGTTTTTGTAGCAAATATGATCGAATC AATCCCCCATTGGGAGGATCAATGCCAGAGTAGCATAGAAGAGCTAGCAT GACAGAACCGGATTGCCTTAGCGGTTATGTGCAATTTAATAAATACATCC ACACCCACAAAACACCCACAACTTGACTTCTGGCCCTGCTCGGAACCGTG TACGGTATTCGATTCGGTATATTTTTGTACTGTCGCTGGTTTGAAGGTGC CTGCCGCTGCTAACGGTGGTGACAAAGAACTACGGACTCAGCCTCGAGTG GATCGGATACTCCCGCAAGGACTTCACCTTTCCGACGGAGCAGGTGACGA ATGGGCCACGAATGGCATAAAGGACTTCACGATTATATTAGTCATGACGA ATAAAGGACTTCCCGATTATAATAGTCATGACGAATGGGCCACGAATGGC ATAAAGGACTTCCCGATTATAATACTAGTCATGACGAATAAAGGAATTCC CGATTATAATAGTCATGACGAATGGGCCACGAATGGCATAAAGGACTTCA CCTTCCCGATTATAATACTAGTCATGACGAATACTGACATAGCTGACATA CGGCACTGGGTTGTTGCTAAACCAACCAACCGGCCTACCTACCTAGCTAG CTTTGGCTTCTCGCGTGTGTATGTACGTATGTCGTGACTAGGACGAGACG CGTTTGATTGGTTGATTGATTGATGATTGATTGATTGTTTGATGATTGAT TGATTGTTTGATGATTGATGCTTGATTGATTGATCGATGTTTGTTTGATT AATTGATGATTGATTGATGGTTGATTGATGATTGATTGGGTGATTTTGTA GACATCGCACCCCTCCCCCCCCGCACCTAACCCTCTCTTGCACTGTGGGC ACCCGACCGTCNNNNNNNNNNTCGTTTGTTTTTTTTTTTAGTTGTTATTG TTTTGTGGTTGGTTGATGGTTGATTGGCCGGTCCCCCCCCCCCCCCCATC CGCTGATTCCATTGGTGCGCACGGGAGAAACGACGGAAACCAACGCGGTT ACGACGAGCGCGCTTCATTAAACACGATTCGGTGGCCCTGTCTTTTTCGT ACAGATCTATCCCCACACATCGTTCGCCGAAGAGGTGGACTTCCTCGAAA CGATGTTCACCGGGTCGGCCGTCGTGCACGGGCCGTTGAACAGCGACCAC TGGTACACCTACGTGGCGGACGATTGCAAGAAGCCCACGAGCGCCGCGGC CGACCGCACGCTGAATATAATGATGTACGGTCTCGAGCCGGATGTGGCCA AGAACTTCCACAAGTCTTCGGACGTGAGTCGCCGAATAACCATACCGAAT ATAAATTACGAATAAATCTACCGAATAATAGTTCCGAATAATCATACCGA ATAATCATACCAAATAATCATTCCGAATAATCATTCTGAATAACCCAAGG ATATAGGGGAGATGGGGGAGGGGGGAATTAAAATGATTTTTTGCATGCTT TAGCTATTAGGCCATTGTATCATTAGAGTATTAGTATCATTAGAGTATCA TTAGAGTATTAGTGTCTAGGAACATGTCCCGTGGGAGACTCAATTCAAGT CATTTTGTTCATCCGGAAGCGGTTTACTTGATCAACGAAATCTTACTGCA CTGCAGATAGATGCAGATAGATGCAAAAACTTCCCGAACTATTCGTCTGA AGTAGATCATTACATTATTACACCACAAGACGATTCATGGTTGCCTGAAG CAGGGGTCAGGCGCTTTATATGCTATGCTAGCTGGTGATCACCAGCAGCG AAATATTTTATGAATACCGTAACCGTCTCTTCCTCCGAGGGGGGGGGGGG GGCGGTTCGCCCGCCGGGGGGGGCGGGGGAAAGGAGGGGGCGGGGGGAAT TTGGTGGGGGAAGAAGGGCTAGTGGGGGAGCACAAGAACGAAGATTTTTT GTCAAACCCGTACCCGTCTTTTCCGCTGAGGGGGGGGGGGGGACGCTGCG ACGCGCGTGCGGGTCGCGGAAAAGAGTCGGGCGGATGAATTTGGTCGGCG AAAGAAGCGTGACCCCATATACCCCGCGCTTTGGGAGATGACAGAAACAA AAGAGAAACACGCCTTCGTAGGAAATAAATCCTGGAGGCGCAACAAGTGG CAAGATAAACTCGATACCCCCTCCCCCCCGAGTCTTGTATTAATAGTGAG CTAGGAACAACAACAAAAAGGATGCTTGGTAGGTACACACTGCTGCCTGG GTTGTTTTCCACCGTGATCATGCGATCCGTATGCCCACTGACGGCGTGTT TCGTGTGACGGCGGCGTCTTGCATGCCTACCTGTGTGGGCAGATTCGAAC AGCCGAGGACGTATCGTCGCGATCGGGCATTCGAGAAGTTCTTCCAAGAG CGACGTTGCAGGACCACCTGTTCGAGCCGTGTGGGTACAGCATGAACGCA CTGGAGGGGCGTGCCTACTACACCGTCCATGTG
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Coding sequence (CDS) from alignment at H-elongata_contig59090:56..3138+

>mRNA_H-elongata_contig59090.13420.1 ID=mRNA_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig59090:56..3138+ (Himanthalia elongata Himel1 dioecious)
CAAAAGGCGCAGTGCCAGATTCTCAACCATCGGGGCAACGACTTCTTCGA
CTCCTACGTGCTGTCGGAGAGCAGCTTGTTCGTCTACAAGGCCAAGCTCG
TGCTCAAGACCTGTGGAACAACGACACTGCTCAGCAAAAGGCGCAGTGCC
AGATTCTCAACCATCGGGGCAACGACTTCTTCGACTCCTACGTGCTGTCG
GAGAGCAGCTTGTTCGTCTACAAGGCCAAGCTCGTGCTCAAGACCTGTGG
AACAACGACACTGCTCAGGTGCCTGCCGCTGCTAACGGTGGTGACAAAGA
ACTACGGACTCAGCCTCGAGTGGATCGGATACTCCCGCAAGGACTTCACC
TTTCCGACGGAGCAGGTGCCTGCCGCTGCTAACGGTGGTGACAAAGAACT
ACGGACTCAGCCTCGAGTGGATCGGATACTCCCGCAAGGACTTCACCTTT
CCGACGGAGCAGATCTATCCCCACACATCGTTCGCCGAAGAGGTGGACTT
CCTCGAAACGATGTTCACCGGGTCGGCCGTCGTGCACGGGCCGTTGAACA
GCGACCACTGGTACACCTACGTGGCGGACGATTGCAAGAAGCCCACGAGC
GCCGCGGCCGACCGCACGCTGAATATAATGATGTACGGTCTCGAGCCGGA
TGTGGCCAAGAACTTCCACAAGTCTTCGGACATCTATCCCCACACATCGT
TCGCCGAAGAGGTGGACTTCCTCGAAACGATGTTCACCGGGTCGGCCGTC
GTGCACGGGCCGTTGAACAGCGACCACTGGTACACCTACGTGGCGGACGA
TTGCAAGAAGCCCACGAGCGCCGCGGCCGACCGCACGCTGAATATAATGA
TGTACGGTCTCGAGCCGGATGTGGCCAAGAACTTCCACAAGTCTTCGGAC
ATTCGAACAGCCGAGGACGTATCGTCGCGATCGGGCATTCGAGAAGTTCT
TCCAAGAGCGACGTTGCAGGACCACCTGTTCGAGCCGTGTGGGTACAGCA
TGAACGCACTGGAGGGGCGTGCCTACTACACCGTCCATGTGATTCGAACA
GCCGAGGACGTATCGTCGCGATCGGGCATTCGAGAAGTTCTTCCAAGAGC
GACGTTGCAGGACCACCTGTTCGAGCCGTGTGGGTACAGCATGAACGCAC
TGGAGGGGCGTGCCTACTACACCGTCCATGTG
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