mRNA_H-elongata_contig59090.13420.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: D7FY29_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY29_ECTSI) HSP 1 Score: 348 bits (892), Expect = 1.280e-117 Identity = 164/197 (83.25%), Postives = 183/197 (92.89%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
++AQC IL+ RGND FDSYVLSESSLFVYK+KLVLKTCGTTTLLRCLPLLTVV+KNYGL+LEWIGYSRK+FTFPT+Q YPHTSFAEEVDFL+ MF+GSA VHGPLNSDHWYTYVADDCKK T+AAADRTLN+MMY LEP+VA+NF+K+ I+T EDVSSRSGI+ VLP A LQDHLFEPCGYSMNALEG+AYYTVHV
Sbjct: 84 EQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQGMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYKTDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHV 280
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI) HSP 1 Score: 218 bits (554), Expect = 4.610e-66 Identity = 101/203 (49.75%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 4 KAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLP-LLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFL------ETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+A+C IL+ ND+ D+YVLSESSLFVY K+V+KTCGTTTLLRC+ LL + GL LEW+GYSRK+FTFP++Q++PH+SF +E+ +L E G+ V GP+ DHW+ Y+AD C +P A DRT+N+MM+ + PD AK+F+K + T +++ ++GI E++P A + D F+PCGYSMNA+ +YYT+HV
Sbjct: 116 RAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEA-CPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHV 317
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A484E2K2_BRELC (Adenosylmethionine decarboxylase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2K2_BRELC) HSP 1 Score: 209 bits (532), Expect = 3.320e-63 Identity = 108/213 (50.70%), Postives = 142/213 (66.67%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYV--ADDCKKPTS------------AAADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+ QCQIL+ N+ D+YVLSESS+F+Y K+VLKTCGTTTLL+CLP + +++ GLS+EW+ YSRK++TFP EQ YPHTSF EV FL + F GSA V GPLN DHWY Y AD ++P S AA + TL I+M + P VAK F KS+D T+ ++ SGIR+++P A + D F+PCGYSMN + AYYT+H+
Sbjct: 65 EAGQCQILSRTSNEHIDAYVLSESSMFIYTHKIVLKTCGTTTLLKCLPFIKTFSEHLGLSIEWVSYSRKNYTFPEEQKYPHTSFHTEVAFLSSFFPDGSAHVLGPLNHDHWYIYAWDADIHEQPASRTQSPSYSLKETAANESTLQILMQDMHPKVAKQFFKSTDSSMTSRRMTIESGIRDLVPGAIIDDFSFDPCGYSMNGILFDAYYTIHI 277
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A0P1AUS8_PLAHL (Adenosylmethionine decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUS8_PLAHL) HSP 1 Score: 205 bits (522), Expect = 9.960e-62 Identity = 104/211 (49.29%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMF-TGSAVVHGPLNSDHWYTYVAD-DCKKPTS-----------AAADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+ QCQIL+ ND D+YVLSESS+F+Y K+VLKTCGTTTLL+CLP + + GL +EW+ YSRK++TFP EQ YPHTSF EV FL + F GSA V GPLN DHWY Y D D + T A + TL ++M ++P VAK F K+ D T+ ++ SGIR+++P A + D F+PCGYSMN + AYYT+H+
Sbjct: 65 EAGQCQILSRTSNDHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPFIKTFSNRLGLEIEWVSYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPNGSAHVLGPLNHDHWYIYAWDADIHEHTDLLPVNLPHKEVGANESTLQVLMQDMDPSVAKQFFKNDDSTITSRRMTIESGIRDLVPGALIDDFAFDPCGYSMNGILFDAYYTIHI 275
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: H3GXV0_PHYRM (S-adenosylmethionine decarboxylase proenzyme n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GXV0_PHYRM) HSP 1 Score: 204 bits (518), Expect = 3.860e-61 Identity = 105/211 (49.76%), Postives = 139/211 (65.88%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYV--ADDCKKPTSAAA----------DRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+ QCQIL+ N+ D+YVLSESSLFVY K+VLKTCGTTTLL+CLP + ++ GLS+EW+ YSRK++TFP EQ YPHTSF EV FL + F GSA V GPLN DHWY Y AD +P + + TL+++M + P VAK F K++D T+ ++ SGIR+++P A + D F+PCGYSMN + AYYT+H+
Sbjct: 65 EAGQCQILSRTSNEHIDAYVLSESSLFVYAHKVVLKTCGTTTLLKCLPFIKTFSERLGLSIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPDGSAHVLGPLNRDHWYIYAWDADIHGEPGALTHNYALEEPGQNESTLHVLMQDMHPSVAKQFFKNNDSTLTSRRMTIESGIRDLVPGAVIDDFAFDPCGYSMNGILFDAYYTIHI 275
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A8J2WZ11_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ11_9STRA) HSP 1 Score: 203 bits (516), Expect = 7.900e-61 Identity = 102/210 (48.57%), Postives = 141/210 (67.14%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLP-LLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFL-------ETMFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFH----KSSDIRTA-EDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
++A+C IL+ N D+YVLSESSLFVY K+V+KTCG TTLLRCL L+ T GL LEW+GYSRK++ FP +Q+ PH F +E+ +L E +F GS V GPL DHW+ YV+D C++P S+A +RT+N+MM+ L DV ++FH + SD+R A ++ RSG++ ++P + DH F PCGYS+NAL +Y TVHV
Sbjct: 64 EEARCTILSRMSNAHLDAYVLSESSLFVYAHKVVVKTCGRTTLLRCLRRLVQEATSTLGLQLEWVGYSRKNYCFPDDQVAPHGCFEDELRYLKAHQGDAEKVFDGSGYVLGPLTGDHWFVYVSDQCERPASSATERTVNVMMFDLPEDVRRHFHLQGDEDSDLRAAGRAMTQRSGLKALIP-GKVDDHAFAPCGYSLNALSFESYTTVHV 272
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A812R309_9DINO (Adenosylmethionine decarboxylase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R309_9DINO) HSP 1 Score: 204 bits (518), Expect = 8.080e-61 Identity = 100/198 (50.51%), Postives = 137/198 (69.19%), Query Frame = 1
Query: 7 AQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRT--AEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
A C +L+ N+ F SYVLSESS+FVY+ K+++KTCGTTTLL LP + K G+ +EW+ +SRKDF+FP EQ +PH EEV FL+ GSA V GP+ DHW +VAD C++P++ + D TLN+MMY ++P VA F + + RT A +V+S + I +LP +T+QD LF+PCGYSMN L G AY+T+HV
Sbjct: 48 AACGVLSIVTNEHFHSYVLSESSMFVYRHKVIIKTCGTTTLLAMLPHVERRIKELGMDIEWLAFSRKDFSFPAEQKFPHRGIQEEVSFLQAAHPQGSAYVLGPITGDHWMVFVADYCERPSAESTDCTLNVMMYDIDPSVAAMFQEQYEGRTLTAAEVTSLTRIDTLLPGSTIQDVLFQPCGYSMNGLLGEAYWTIHV 245
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: M4BIM5_HYAAE (Adenosylmethionine decarboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIM5_HYAAE) HSP 1 Score: 203 bits (517), Expect = 8.220e-61 Identity = 104/214 (48.60%), Postives = 137/214 (64.02%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVAD-DCKKPTSA--------------AADRTLNIMMYGLEPDVAKNFHKSSDIR-TAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+ QCQIL+ N+ D+YVLSESS+F+Y K+VLKTCGTTTLL+CLP + + GL +EW+ YSRK++TFP EQ YPHTSF EV FL + F GSA V GPLN DHWY Y D D + S A + TL+++M + P VAK F KS+D + ++ SGIR+++P AT+ D F+PCGYSMN + AYYT+H+
Sbjct: 57 EAGQCQILSRISNEHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPFIKTFAERLGLEIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFPDGSAHVLGPLNHDHWYIYAWDADIHEHQSVTDVLIHPGMGKELGANESTLHVLMQDMHPSVAKQFFKSNDTTMVSRQMTIESGIRDLVPGATIDDFAFDPCGYSMNGILFDAYYTIHI 270
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.260e-60 Identity = 99/203 (48.77%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 4 KAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNY-GLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLET------MFTGSAVVHGPLNSDHWYTYVADDCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSDIRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+A+C I++ N D+YVLSESSLFVY K+VLKTCG TTLLRCLP L + Y G LEW+GYSRK+F +PT+Q++PHTSF +E+ +L+ +GSA + GPL DHW+ YVAD ++P +DRT+NIMM+ + D A+ F+K TAE+ + SGI ++P A + FEPCGYSMNA++ +Y T+H+
Sbjct: 118 RAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYKDK-YPTAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHI 319
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Match: K3WA15_GLOUD (Adenosylmethionine decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA15_GLOUD) HSP 1 Score: 202 bits (514), Expect = 1.750e-60 Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 1
Query: 1 QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLTVVTKNYGLSLEWIGYSRKDFTFPTEQIYPHTSFAEEVDFLETMFT-GSAVVHGPLNSDHWYTYVAD----------DCKKPTSAAADRTLNIMMYGLEPDVAKNFHKSSD-IRTAEDVSSRSGIREVLPRATLQDHLFEPCGYSMNALEGRAYYTVHV 591
+ QC IL+ N+ D+YVLSESS+FVY K+V+KTCGTTTLL+ LP + + G+ +EW+ YSRK++TFP EQ+YPHTSF EV FL F GSA V GPLN DHWY YV D +P +A+ + TL+++M + P VA+ F K +D T+ ++ SGIR+++P A L D F+PCGYSMN + AYYT+H+
Sbjct: 73 EAGQCMILSKTSNEHIDAYVLSESSMFVYAHKVVIKTCGTTTLLKTLPFIRKYAERLGMEIEWVSYSRKNYTFPEEQVYPHTSFQTEVAFLNDFFPDGSAHVLGPLNHDHWYIYVWDADEHEPSIAGGVHRPLTASNESTLHVLMQDMHPTVAQKFFKEADPTMTSRRMTIESGIRDLVPGAVLDDFAFDPCGYSMNGILFDAYYTIHI 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59090.13420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59090.13420.1 >prot_H-elongata_contig59090.13420.1 ID=prot_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp QKAQCQILNHRGNDFFDSYVLSESSLFVYKAKLVLKTCGTTTLLRCLPLLback to top mRNA from alignment at H-elongata_contig59090:56..3138+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59090.13420.1 ID=mRNA_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3083bp|location=Sequence derived from alignment at H-elongata_contig59090:56..3138+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59090:56..3138+ >mRNA_H-elongata_contig59090.13420.1 ID=mRNA_H-elongata_contig59090.13420.1|Name=mRNA_H-elongata_contig59090.13420.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig59090:56..3138+ (Himanthalia elongata Himel1 dioecious)back to top |